Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30375
(721 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein ... 153 7e-39
AY994095-1|AAX86008.1| 144|Anopheles gambiae unknown protein. 28 0.33
DQ182016-1|ABA56308.1| 353|Anopheles gambiae G(alpha)i protein. 25 2.4
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 25 3.1
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 25 3.1
DQ989013-1|ABK97614.1| 378|Anopheles gambiae gustatory receptor... 24 5.4
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 23 7.2
AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP prot... 23 9.5
AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein. 23 9.5
>AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein L8
protein.
Length = 261
Score = 153 bits (370), Expect = 7e-39
Identities = 66/83 (79%), Positives = 77/83 (92%)
Frame = +3
Query: 264 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 443
+YTGQFVYCG++A L++GNV+P+G MPEGTIVCNLEEK GDRG+LAR SGN+A+VI HNP
Sbjct: 82 MYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIAHNP 141
Query: 444 DAKRTRVKLPSGAKKVLPSSNRA 512
D KRTRVKLPSGAKKVLPS+NRA
Sbjct: 142 DTKRTRVKLPSGAKKVLPSANRA 164
Score = 149 bits (360), Expect = 1e-37
Identities = 66/72 (91%), Positives = 67/72 (93%)
Frame = +2
Query: 506 QGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 685
+ MVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWP VRGVAMNPVEHPHGGGNHQHIGKA
Sbjct: 163 RAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKA 222
Query: 686 STVKRGTSAGPK 721
STVKRGT G K
Sbjct: 223 STVKRGTPPGRK 234
Score = 141 bits (342), Expect = 2e-35
Identities = 64/83 (77%), Positives = 73/83 (87%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIRAQRKGAGSVF +HTKKRKG PKLR LDYAERHGY+KGVVK II DPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFRAHTKKRKGQPKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAV 60
Query: 203 VHFRDPYKFKTRKELFIVPKALH 271
V+FRDPY+F+ K+LFI + ++
Sbjct: 61 VNFRDPYRFRLSKQLFIAAEGMY 83
>AY994095-1|AAX86008.1| 144|Anopheles gambiae unknown protein.
Length = 144
Score = 27.9 bits (59), Expect = 0.33
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +2
Query: 464 KATVWSQEGSAIKQQGMVGIVAGGGRIDKPILKAGRAYHK 583
K +W +A Q +G V GG D IL GRAYH+
Sbjct: 73 KQLIWD---TASAGQVPLGAVVGGHTSDGEILYVGRAYHE 109
>DQ182016-1|ABA56308.1| 353|Anopheles gambiae G(alpha)i protein.
Length = 353
Score = 25.0 bits (52), Expect = 2.4
Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Frame = -3
Query: 419 EVSRGTCQTTSI--THFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPSG 255
+V R +TT I THF FK H R + CF + CV SG
Sbjct: 172 DVLRTRVKTTGIVETHFSFKSIHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSG 228
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 3.1
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 131 RHGYIKGVVKDIIHDP 178
R+ +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 3.1
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 131 RHGYIKGVVKDIIHDP 178
R+ +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752
>DQ989013-1|ABK97614.1| 378|Anopheles gambiae gustatory receptor 24
protein.
Length = 378
Score = 23.8 bits (49), Expect = 5.4
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 401 CQTTSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLA 273
C+T SIT + LRH +S ++S +L ++KLA
Sbjct: 180 CETLSITAKILAEDFQRALRHVGPAAKVSEYRSLWL-RLSKLA 221
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 23.4 bits (48), Expect = 7.2
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -3
Query: 635 GSWQHHVHMASSYV*PCTCGMPFQLSK*VCQY 540
GS H SSYV CG P ++ C++
Sbjct: 504 GSEGHKARDCSSYVKCAACGGPHRIGHMSCEH 535
>AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP
protein.
Length = 151
Score = 23.0 bits (47), Expect = 9.5
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2
Query: 549 LSIRPPPATIPTM 511
+ +RPPP +PTM
Sbjct: 114 MGMRPPPMMVPTM 126
>AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein.
Length = 722
Score = 23.0 bits (47), Expect = 9.5
Identities = 7/19 (36%), Positives = 8/19 (42%)
Frame = +1
Query: 487 RFCHQATGHGRYCCWRWTY 543
+FC T Y W W Y
Sbjct: 513 QFCKDTTPECNYTFWEWLY 531
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 848,425
Number of Sequences: 2352
Number of extensions: 19664
Number of successful extensions: 44
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -