Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30374
(710 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0829 - 6254769-6254852,6254940-6255024,6255158-6255245,625... 50 1e-06
02_05_0784 + 31726453-31726563,31726820-31726897,31727307-317278... 44 2e-04
07_03_0171 + 14687791-14687898,14688465-14688550,14689474-146895... 42 4e-04
03_06_0353 - 33317015-33318235,33318567-33318824,33319587-333199... 33 0.22
12_01_0371 - 2851186-2851491,2851582-2851765,2851967-2852156,285... 33 0.30
02_03_0246 - 16807619-16808145,16808208-16808868 32 0.52
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 31 0.90
01_05_0716 + 24569177-24569462,24569818-24569938,24570033-245700... 31 0.90
05_02_0049 - 6083364-6084111,6084140-6084246 31 1.2
08_01_0626 - 5445676-5446687,5447099-5447430 30 1.6
05_07_0005 + 26997352-26998674 30 2.1
01_06_1310 - 36176008-36176472,36176547-36176774,36177313-361780... 30 2.1
11_01_0636 - 5095754-5095974,5097188-5097254,5097467-5098363 29 2.8
02_02_0704 + 13095449-13095584,13095671-13095990,13096102-130964... 29 3.6
01_06_1842 - 40278875-40280131 29 3.6
01_06_1480 - 37660591-37660720,37660899-37660930,37661061-376611... 29 3.6
01_03_0137 - 12904727-12904981,12907192-12907605 29 3.6
01_01_1086 + 8539821-8540024,8540132-8540237,8540635-8540660 29 3.6
01_06_0115 + 26585481-26586401,26586501-26586556,26586747-265868... 29 4.8
09_02_0240 - 6157855-6157891,6158040-6158329 28 6.4
08_02_0998 - 23411422-23411649,23411897-23412625 28 6.4
08_01_0947 + 9399366-9399568,9399683-9399855,9400745-9401130,940... 28 6.4
09_04_0373 - 17037945-17040641 28 8.4
06_01_0043 - 412675-412798,412891-412997,413104-413197,413733-41... 28 8.4
02_04_0130 + 20025414-20025531,20026357-20026585,20026909-200270... 28 8.4
01_05_0283 - 20354065-20354154,20354579-20354890,20355566-203557... 28 8.4
>06_01_0829 -
6254769-6254852,6254940-6255024,6255158-6255245,
6255344-6255407,6255496-6255576,6256709-6256781,
6256871-6257385,6258168-6258284
Length = 368
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = +2
Query: 77 LPARAQGYMWSLAFSTSQHGFSLASMYRKMQRVDSPVLLVIQDTDNNVFGAMTSCALHPL 256
LP QG W L +ST +HG SL+++YR+ LL++ D VFG + L PL
Sbjct: 197 LPVLVQGRNWMLVYSTWRHGISLSTLYRRSMLCAGYSLLIVGDRKGAVFGGLVEAPLQPL 256
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +3
Query: 471 FYSWEQRQYIDRRGDGKFGLWLDGDLYLGRTQRCKTYGNEPLTTREDFIVKIMECWTFI 647
++++ Y+ G G F L+LDGDL G + +T+ N L+ +F VK +E W F+
Sbjct: 288 YFTFCSTDYLAMGGGGHFALYLDGDLLNGSSSTSETFNNPCLSRSREFEVKDVELWGFV 346
>02_05_0784 +
31726453-31726563,31726820-31726897,31727307-31727843,
31728225-31728305,31728394-31728457,31728738-31728825,
31728934-31729018,31729103-31729186
Length = 375
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +3
Query: 495 YIDRRGDGKFGLWLDGDLYLGRTQRCKTYGNEPLTTREDFIVKIMECWTFI 647
Y+ G G F L+LD DL G + +T+ N L+ DF VK +E W F+
Sbjct: 303 YLALGGGGHFALYLDADLLSGSSSNSETFNNMCLSHSPDFAVKDVELWGFV 353
>07_03_0171 +
14687791-14687898,14688465-14688550,14689474-14689546,
14689661-14689741,14690010-14690073,14690673-14690760,
14690843-14690927,14692190-14692228
Length = 207
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +3
Query: 510 GDGKFGLWLDGDLYLGRTQRCKTYGNEPLTTREDFIVKIMECWTF 644
G G F L LD DL G + C+T+GN L DF +K +E W F
Sbjct: 155 GGGSFALCLDEDLLHGTSGSCQTFGNSCLAHSPDFELKNVELWGF 199
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 122 TSQHGFSLASMYRKMQRVDSPVLLVIQDTDNNVFGAMTSCALHP 253
T +HG SL +++R+ + + P LL++ D VFG + + L P
Sbjct: 66 TWKHGTSLRTLFRRSENLQGPCLLIVGDMRGAVFGGLLNGPLRP 109
>03_06_0353 -
33317015-33318235,33318567-33318824,33319587-33319904,
33319949-33320011,33320103-33320496,33320684-33320796,
33320932-33321639,33321667-33323199,33323395-33323607,
33323718-33324700,33324890-33325423,33325694-33325820,
33326083-33326162,33327347-33327377,33327949-33328053,
33328119-33328124,33328349-33328985,33329144-33329478,
33330394-33331113
Length = 2792
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 322 PGAHGPVHADDSNKETDSDNQSDTKKEDNEQSQT 423
PG + +H D ++ ETD D+ S+ DN +S+T
Sbjct: 415 PGINKHIHFDSTDDETDGDSSSEGDAVDNSESKT 448
>12_01_0371 -
2851186-2851491,2851582-2851765,2851967-2852156,
2853375-2853613,2853862-2853947,2854720-2854827,
2854929-2855031,2855152-2855213
Length = 425
Score = 32.7 bits (71), Expect = 0.30
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 104 WSLAFSTSQHGFSLASMYRKMQRVDSPVLLVIQDTDNNVFGAMTS 238
W L + +S HG S + + D+ +++++DT+ VFG S
Sbjct: 242 WRLLYHSSLHGQSFNTFLGNVTNGDAQTVIIVKDTEGFVFGGYAS 286
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +3
Query: 522 FGLWLDGDLYLGRTQRCKTYGNEPLTTREDFIVKIMECW 638
FG +L + G + C T+ + L+ F +++ECW
Sbjct: 347 FGFFLSANFDQGHSFTCTTFTSPALSKTNRFRPEVIECW 385
>02_03_0246 - 16807619-16808145,16808208-16808868
Length = 395
Score = 31.9 bits (69), Expect = 0.52
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +3
Query: 48 CRNSARGAACYRLALRGTCGRSRSAPASTGSRSRPCTARCSASTAPCSSSYRTP 209
CR+S A C+ CGR R A + + S PCT + + AP +SS P
Sbjct: 102 CRSSRMAARCWPCRPPCCCGRRRRAASPSAS---PCTTPPATARAPRTSSTPGP 152
>08_02_1073 -
24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 31.1 bits (67), Expect = 0.90
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +3
Query: 15 AAALELVDPPGCRNSARGAACYRLALRGTCGRSRSAPASTGSRSRPCTARCSASTA 182
A+++ + P R A GA R + CGR A +GSR R RC A+ A
Sbjct: 277 ASSVAALRPCAGRVRAPGAGAARGSGSARCGRGVRWEAGSGSRGRLVRVRCDAAVA 332
>01_05_0716 +
24569177-24569462,24569818-24569938,24570033-24570082,
24570203-24570270,24570499-24570597,24570688-24570747,
24570863-24570922,24571075-24571129,24571217-24571266,
24571314-24571352
Length = 295
Score = 31.1 bits (67), Expect = 0.90
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +3
Query: 12 VAAALELVDPPGCRNSARGAACY-RLALR---GTCGRSRSAPASTGSRSRPCTARCSAST 179
+AAA L PP S ++ + R ALR GT G R+ STG+R R CS+S
Sbjct: 1 MAAAALLSPPPSPSPSPTPSSLHPRQALRFAVGTGGGGRARATSTGTRRRAALVPCSSSV 60
Query: 180 A 182
+
Sbjct: 61 S 61
>05_02_0049 - 6083364-6084111,6084140-6084246
Length = 284
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 87 ALRGTCGRSRSAPASTGSRSRPCTARCSAS-TAPCSSSYRTPITTCLGP*RRVLYI 251
A R TC +R+APAS S+ S+S T+P + T P ++V+Y+
Sbjct: 74 AARSTCSTARTAPASPSRPSKLTALNLSSSPTSPSLTDSIQLTVTAKNPNKKVVYL 129
>08_01_0626 - 5445676-5446687,5447099-5447430
Length = 447
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/45 (22%), Positives = 23/45 (51%)
Frame = +1
Query: 277 ESFLYSFQRIEEDTSPGAHGPVHADDSNKETDSDNQSDTKKEDNE 411
+ FLY + +++D G +D ++ D D++ + +ED +
Sbjct: 212 DEFLYEDENVDDDEDEGEEDEEIEEDEDENNDDDDEEEEMEEDED 256
>05_07_0005 + 26997352-26998674
Length = 440
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +3
Query: 12 VAAALELVDPPGCRNSARGAACYRLALRGTCGRSRSAPA 128
+ AA L+D R A AA Y L +RG C R A A
Sbjct: 215 LGAAERLIDEMARRGVAPNAATYALLMRGLCDADRHADA 253
>01_06_1310 -
36176008-36176472,36176547-36176774,36177313-36178080,
36178250-36178732,36179883-36180010,36180539-36180607,
36180688-36180892,36181005-36181067
Length = 802
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 295 FQRIEEDTSPGAHGPVHADDSNK-ETDSDNQSDTKKEDNEQSQ 420
F+R+ D S HG H+++ NK + D ++SD+KK+ + Q
Sbjct: 79 FRRLFSDKSKKNHGK-HSEEENKGKGDESDKSDSKKQSSSGDQ 120
>11_01_0636 - 5095754-5095974,5097188-5097254,5097467-5098363
Length = 394
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/43 (23%), Positives = 24/43 (55%)
Frame = +1
Query: 292 SFQRIEEDTSPGAHGPVHADDSNKETDSDNQSDTKKEDNEQSQ 420
S++ ED + ++ H D+ N++ D D+ + + ED ++ +
Sbjct: 351 SYENPFEDENEDSYKGEHEDEDNEDEDEDDDDEDEDEDEDEDE 393
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = +1
Query: 277 ESFLYSFQRIEEDTSPGAHGPVHADDSNKETDSDNQSDTKKEDNE 411
+S+ F+ ED+ G H +D +++ D +++ + + ED E
Sbjct: 350 DSYENPFEDENEDSYKGEHEDEDNEDEDEDDDDEDEDEDEDEDEE 394
>02_02_0704 +
13095449-13095584,13095671-13095990,13096102-13096423,
13096556-13096632,13096744-13097127
Length = 412
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +1
Query: 349 DDSNK--ETDSDNQSDTKKEDNE-QSQTVKTKFKYW 447
DD+ K ETD DN D K +D E QSQ + + W
Sbjct: 205 DDTEKHMETDKDNDKDAKDKDKEGQSQPHRKPRRCW 240
>01_06_1842 - 40278875-40280131
Length = 418
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +3
Query: 3 STAVAAALELVDPPGCRNSARGAACYRLALRGTCGRSRSAPASTGSRSRP--CTARCSAS 176
+ A AAA P +A G A R C RS S ++ + P TA C+A+
Sbjct: 214 NNAAAAAAAAATAPAAA-TAPGPAPARKVSSAPCSRSNSRGETSAAAPPPSIATAACAAA 272
Query: 177 TAPCSSSYRTPITTCL 224
A ++ P T+ L
Sbjct: 273 AAAATAPAPAPATSML 288
>01_06_1480 - 37660591-37660720,37660899-37660930,37661061-37661155,
37661460-37661527,37661608-37661694,37662884-37662912,
37663019-37663138,37663854-37663905,37663986-37664050,
37664174-37664536,37664637-37664711,37664803-37664940,
37665025-37665181,37665471-37665478,37665576-37665710,
37665965-37666082,37666791-37666915,37667571-37667717,
37668297-37668380,37668671-37668800,37669196-37669347,
37669678-37669857,37670660-37670731,37671104-37671295,
37671366-37671411,37671498-37671647,37671725-37671882,
37671995-37672101,37672191-37672407,37672484-37672696,
37672852-37672972,37673072-37673253,37673475-37673672,
37674770-37674967
Length = 1447
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 325 GAHGPVHADDSNKETDSDNQSDTKKEDNE 411
GAHGPVH DD+ +++ S D E
Sbjct: 1094 GAHGPVHPDDTKCSDNAERVSTEVAPDKE 1122
>01_03_0137 - 12904727-12904981,12907192-12907605
Length = 222
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 307 EEDTSPGAHGPVHADDSNKETDSDNQSDTKKEDNE 411
EED G G DD + + D D+ D ++E+ E
Sbjct: 97 EEDEEDGEEGDGGDDDDDDDDDDDDDDDDEEEEEE 131
>01_01_1086 + 8539821-8540024,8540132-8540237,8540635-8540660
Length = 111
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/23 (43%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = -2
Query: 238 RRHGPK-HVVIGVLYDEEHGAVD 173
+ HGP H ++G +D+EHG +D
Sbjct: 89 KNHGPTWHCIVGRNFDKEHGGID 111
>01_06_0115 +
26585481-26586401,26586501-26586556,26586747-26586876,
26587396-26587506,26587606-26587674,26588125-26588198,
26588446-26588581,26588702-26588795,26588901-26589000,
26589100-26589224,26589597-26589634,26589662-26589742,
26589868-26589972,26590102-26590166,26590371-26590572,
26591073-26591159,26591238-26591294,26591369-26591458,
26591572-26591658,26592204-26592278,26592363-26592463,
26592565-26592655
Length = 964
Score = 28.7 bits (61), Expect = 4.8
Identities = 8/33 (24%), Positives = 19/33 (57%)
Frame = +1
Query: 349 DDSNKETDSDNQSDTKKEDNEQSQTVKTKFKYW 447
DD + + D D++ + +E+ E+ + + + YW
Sbjct: 213 DDDDDDDDDDDEDEEAEEEEEEEEEEEEELSYW 245
>09_02_0240 - 6157855-6157891,6158040-6158329
Length = 108
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +3
Query: 45 GCRNSARGAACYRLALRGTCGRSRSAPASTGSRSRPCTARCSASTAPCSSSYRTPITTC 221
G +A A C L + T G+ +A A T C CS+S+ + Y I TC
Sbjct: 4 GAAVTAAAAMCTVLVILSTGGQPPAAAAQTDY----CATACSSSSNGTVTCYNNAINTC 58
>08_02_0998 - 23411422-23411649,23411897-23412625
Length = 318
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 169 LHLAVHGREREPVLAGAERERPHVPLSASR*HAAPR 62
L LA REPV+ GA HV L+ + HA R
Sbjct: 56 LRLAAPPARREPVVVGAAAVAEHVALADAHEHAVAR 91
>08_01_0947 +
9399366-9399568,9399683-9399855,9400745-9401130,
9401791-9402090,9402177-9402266,9403213-9403336,
9403452-9403615,9404572-9404802
Length = 556
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +3
Query: 39 PPGCRNSARGAACYRLALRGTCGRSRSAPASTGSRSR----PCTARCSASTA 182
PP +SA + +LR R+ SA AS R R PC+ RC+ TA
Sbjct: 23 PPRAPSSASPVSGAPASLRFRGRRAASASASAARRRRGASLPCSPRCALETA 74
>09_04_0373 - 17037945-17040641
Length = 898
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Frame = +3
Query: 30 LVDPPGCRN---SARGAACYRLALRGTCGRSRS---APASTGSRSRPCTARCSASTA 182
L P C+N S+ GA+ +AL+ + AP +TG C A C+AS A
Sbjct: 334 LASPAACQNNDSSSGGASVSYIALKPLTSYFATKFDAPTNTGVNKTACRALCTASCA 390
>06_01_0043 -
412675-412798,412891-412997,413104-413197,413733-413820,
413902-413943,414117-414223,414812-414942
Length = 230
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +1
Query: 340 VHADDSNKETDSDNQSDTKKEDNEQSQTVKTKFK 441
+ ADDS+ E SD++SD +D++ ++ + + +
Sbjct: 108 IDADDSDVEPRSDDESDEDDDDDDDTEALMAELE 141
>02_04_0130 +
20025414-20025531,20026357-20026585,20026909-20027032,
20027441-20027497,20027613-20027804,20027882-20027959,
20028437-20028619,20028715-20028795,20029196-20029228,
20029448-20029513,20029591-20029683,20030106-20030231,
20030395-20030508,20030973-20031068,20031159-20031256,
20031416-20031831,20032025-20032473,20032810-20032905
Length = 882
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 304 IEEDTSPGAHGPVHADDSNKETDSDNQS--DTKKEDNEQSQTVKTKFKYW 447
+ +D+S + PV + NK + +S + E NEQ QTVK + W
Sbjct: 771 VGKDSSDPSSAPVKSSKKNKWKPEEIKSLIQMRGEMNEQFQTVKGRMVLW 820
>01_05_0283 -
20354065-20354154,20354579-20354890,20355566-20355763,
20356371-20356754,20357445-20357858,20359771-20360022
Length = 549
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 274 GESFLYSFQRIEEDTSPGAHGPVHADDSNKETDSDNQSDTKKEDNEQSQTVKTKF 438
GE + S + EE + HG D+NK+ DN++D + KT+F
Sbjct: 373 GEQLMKSSDQPEEHCTL-EHGRCQVLDNNKQQTMDNKTDNPEHKEVLKHPKKTRF 426
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,435,784
Number of Sequences: 37544
Number of extensions: 418593
Number of successful extensions: 1850
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1834
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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