Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30371
         (715 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   1.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.3  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   4.3  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   9.9  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 120 SWLQFKYYVSNSPFGIAVSLFLASRSHYRLLNPKKN 227
           SW   K + S     I+ S+F+ + S YR+LN   N
Sbjct: 225 SWYSKKVFYSK--IIISGSIFMTTTSFYRILNSGYN 258


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 641 KLNLK*ASLCSVIILSKLGVFKLYIFY 561
           K  LK    C+ IIL  L VF + ++Y
Sbjct: 313 KTVLKTNKYCNFIILFYLSVFVILVYY 339


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -1

Query: 175 ETAIPKGELLT*YLNCNQEGGHCS 104
           E  +    LL  Y NC  E G CS
Sbjct: 34  EEILKSDRLLKNYFNCLMERGTCS 57


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 151 LLT*YLNCNQEGGHCS 104
           LL  Y+NC  E G CS
Sbjct: 52  LLLNYINCLLEKGPCS 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,688
Number of Sequences: 336
Number of extensions: 3976
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)