Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30367
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.34 
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   2.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   3.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   3.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.2  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   5.5  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   5.5  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   5.5  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.3  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   7.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.7  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   9.7  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   9.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   9.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -2

Query: 195 FIVFFH*YNFLYRIWYFRRGLFFLVVIY 112
           FI+F     FL  I+YF   LFFL+ IY
Sbjct: 120 FIIFTVHLLFLLCIYYFVVPLFFLLCIY 147



 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 195 FIVFFH*YNFLYRIWYFRRGLFFLVVIY 112
           FI+F     FL  I+YF   L  L+ IY
Sbjct: 272 FIIFTMHLLFLLCIYYFYCALIILLCIY 299



 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -2

Query: 195 FIVFFH*YNFLYRIWYFRRGLFFLVVIY 112
           FI+    Y F Y    F   L FL+ IY
Sbjct: 107 FIILLCVYYFYYAFIIFTVHLLFLLCIY 134


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 537 NLHHCHSLFIHQMSVQQNVS 478
           NL H + L +HQ   QQN+S
Sbjct: 304 NLLHSNDLNMHQQHHQQNMS 323


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = -3

Query: 455 TFIVCIIIKL-YLCLWVCWLIIVIA*VGKFESS 360
           T +V     L YLC    WL++++A   + + S
Sbjct: 312 TLVVIYTFNLFYLCFCFYWLLVMVAMFSRTQQS 344


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = -3

Query: 455 TFIVCIIIKL-YLCLWVCWLIIVIA*VGKFESS 360
           T +V     L YLC    WL++++A   + + S
Sbjct: 268 TLVVIYTFNLFYLCFCFYWLLVMVAMFSRTQQS 300


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = -3

Query: 452 FIVCIIIKLYLCLWVCWLIIVIA*VGKFESSFVFK*VSC*IIYRVRR 312
           FI+C+I++     W+  L I +  +      F    V C  I+ V +
Sbjct: 616 FIICVIVQSEQIAWLHLLYIFLVGIMYAADVFYICHVCCSTIHEVSK 662


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 414 VGLLVDYCYCL 382
           +GLLVD  YCL
Sbjct: 283 IGLLVDSTYCL 293


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 414 VGLLVDYCYCL 382
           +GLLVD  YCL
Sbjct: 283 IGLLVDSTYCL 293


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 414 VGLLVDYCYCL 382
           +GLLVD  YCL
Sbjct: 283 IGLLVDSTYCL 293


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 337 QLTYLKTKLLSNLPTQAITIINQ 405
           +LT+  +  + N P+ AI I+N+
Sbjct: 21  KLTHALSSSVQNFPSDAIKILNR 43


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 91  MSESSTQINHNKEEQSTTKIPDS 159
           MS+ S +I  N+E  S +K+P S
Sbjct: 1   MSKDSLEIVKNEEFDSDSKLPFS 23


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -3

Query: 527 IVIRCLFTR*VSNKMFPVIALRLATFI 447
           +VI+C     +   ++PV+AL +   I
Sbjct: 149 VVIQCYLEIKIDEHLYPVVALVVKNLI 175


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 494 TLIW*INSE*QWCKLLK 544
           T++  I    QWCKLL+
Sbjct: 75  TILTTITKRNQWCKLLE 91


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 494 TLIW*INSE*QWCKLLK 544
           T++  I    QWCKLL+
Sbjct: 75  TILTTITKRNQWCKLLE 91


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 494 TLIW*INSE*QWCKLLK 544
           T++  I    QWCKLL+
Sbjct: 395 TILTTITKRNQWCKLLE 411


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,283
Number of Sequences: 336
Number of extensions: 3388
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)