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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30367
         (700 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g07450.1 68417.m01143 hypothetical protein includes At2g05890...    31   0.97 
At3g28770.1 68416.m03591 expressed protein                             30   1.7  
At5g35250.1 68418.m04179 hypothetical protein includes At2g05890...    29   3.9  
At4g03300.1 68417.m00451 Ulp1 protease family protein contains P...    29   3.9  
At4g08150.1 68417.m01346 homeobox protein knotted-1 like 1 (KNAT...    28   5.2  
At2g14770.2 68415.m01669 Ulp1 protease family protein similar to...    28   5.2  
At2g14770.1 68415.m01668 Ulp1 protease family protein similar to...    28   5.2  
At1g34740.1 68414.m04319 Ulp1 protease family protein contains P...    28   5.2  

>At4g07450.1 68417.m01143 hypothetical protein includes At2g05890,
           At4g07450, At3g30630, At3g43100, At2g09960, At3g30550,
           At1g39430, At2g10460, At4g03640, At5g35250
          Length = 439

 Score = 30.7 bits (66), Expect = 0.97
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -2

Query: 678 KPKFWRQILQSPIIYFLLANYSVHMHIIRQTG 583
           KP+FW +I       +++A + +H+HI+ QTG
Sbjct: 253 KPRFWCEICNG-FAKYVVAKFWLHLHIMGQTG 283


>At3g28770.1 68416.m03591 expressed protein 
          Length = 2081

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +1

Query: 94   SESSTQINHNKEEQSTTKIPDSVKKIILMEKDNEANANRKSRID 225
            SES    N  K + +T    D  K  ILM+ D++A+++  S+ D
Sbjct: 1254 SESKEAENQQKSQATTQADSDESKNEILMQADSQADSHSDSQAD 1297



 Score = 29.9 bits (64), Expect = 1.7
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +1

Query: 94   SESSTQINHNKEEQSTTKIPDSVKKIILMEKDNEANANRKSRID 225
            SES    N  K + +T    D  K  ILM+ D++A+++  S+ D
Sbjct: 1365 SESKEAENQQKSQATTQADSDESKNEILMQADSQADSHSDSQAD 1408



 Score = 28.3 bits (60), Expect = 5.2
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +1

Query: 94   SESSTQINHNKEEQSTTKIPDSVKKIILMEKDNEANANRKSRID 225
            SES    N  K + +T    D  K  ILM+ D++A+ +  S+ D
Sbjct: 1476 SESKEAENQQKSQATTQGESDESKNEILMQADSQADTHANSQGD 1519


>At5g35250.1 68418.m04179 hypothetical protein includes At2g05890,
           At4g07450, At3g30630, At3g43100, At2g09960, At3g30550,
           At1g39430, At2g10460, At4g03640, At5g35250
          Length = 384

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 678 KPKFWRQILQSPIIYFLLANYSVHMHIIRQTG 583
           KP+FW +I        ++A + +H+HI+ QTG
Sbjct: 213 KPRFWCEICNG-FAKSVVAKFWLHLHIMDQTG 243


>At4g03300.1 68417.m00451 Ulp1 protease family protein contains Pfam
            profile PF02902: Ulp1 protease family, C-terminal
            catalytic domain; similar to At3g24380, At5g36840,
            At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
            At2g05560, At4g08880, At1g34730, At1g27790 , At1g34740,
            At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
            At4g05280, At1g25886
          Length = 1285

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/53 (24%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
 Frame = +1

Query: 94   SESSTQINHNKEEQSTTKIPDSVKKIILMEKDNEANANRKSR-IDLNALPTRQ 249
            S+++  +   +E++++ K+P  VKK ++ E+D+    + K++ + +  +PT+Q
Sbjct: 950  SDNAAAVEAKEEKKASPKVPKKVKKQLIYEQDDAHPHDFKAKTVLVPDVPTQQ 1002


>At4g08150.1 68417.m01346 homeobox protein knotted-1 like 1 (KNAT1)
           identical to homeobox protein knotted-1 like 1  (KNAT1)
           SP:P46639 from [Arabidopsis thaliana]
          Length = 398

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 546 NLSNLHHCHSLFIHQMSVQQNVSSHCF 466
           N +N HH H LF H  S+    + +CF
Sbjct: 54  NNNNHHHQHMLFPHMSSLLPQTTENCF 80


>At2g14770.2 68415.m01669 Ulp1 protease family protein similar to
           At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
           At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
           At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
           At1g52020, At3g24390,  At4g05280, At1g25886, At4g03300;
           contains Pfam profile PF02902: Ulp1 protease family,
           C-terminal catalytic domain
          Length = 1158

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 10/33 (30%), Positives = 23/33 (69%)
 Frame = +1

Query: 94  SESSTQINHNKEEQSTTKIPDSVKKIILMEKDN 192
           S+++  +   +E++S+ K+P  VKK ++ E+D+
Sbjct: 858 SDNAAAVEAEEEKKSSPKVPKKVKKQLVYEQDD 890


>At2g14770.1 68415.m01668 Ulp1 protease family protein similar to
           At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
           At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
           At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
           At1g52020, At3g24390,  At4g05280, At1g25886, At4g03300;
           contains Pfam profile PF02902: Ulp1 protease family,
           C-terminal catalytic domain
          Length = 1139

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 10/33 (30%), Positives = 23/33 (69%)
 Frame = +1

Query: 94  SESSTQINHNKEEQSTTKIPDSVKKIILMEKDN 192
           S+++  +   +E++S+ K+P  VKK ++ E+D+
Sbjct: 839 SDNAAAVEAEEEKKSSPKVPKKVKKQLVYEQDD 871


>At1g34740.1 68414.m04319 Ulp1 protease family protein contains Pfam
           profile PF02902: Ulp1 protease family, C-terminal
           catalytic domain; similar to At3g24380, At5g36840,
           At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
           At2g05560, At4g08880, At1g34730, At1g27790, At1g27780,
           At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
           At1g25886, At4g03300
          Length = 1383

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 10/33 (30%), Positives = 23/33 (69%)
 Frame = +1

Query: 94  SESSTQINHNKEEQSTTKIPDSVKKIILMEKDN 192
           S+++  +   +E++S+ K+P  VKK ++ E+D+
Sbjct: 810 SDNAAAVEAKEEKKSSPKVPKKVKKQLVYEQDD 842


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,409,148
Number of Sequences: 28952
Number of extensions: 273138
Number of successful extensions: 642
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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