BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30367 (700 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g07450.1 68417.m01143 hypothetical protein includes At2g05890... 31 0.97 At3g28770.1 68416.m03591 expressed protein 30 1.7 At5g35250.1 68418.m04179 hypothetical protein includes At2g05890... 29 3.9 At4g03300.1 68417.m00451 Ulp1 protease family protein contains P... 29 3.9 At4g08150.1 68417.m01346 homeobox protein knotted-1 like 1 (KNAT... 28 5.2 At2g14770.2 68415.m01669 Ulp1 protease family protein similar to... 28 5.2 At2g14770.1 68415.m01668 Ulp1 protease family protein similar to... 28 5.2 At1g34740.1 68414.m04319 Ulp1 protease family protein contains P... 28 5.2 >At4g07450.1 68417.m01143 hypothetical protein includes At2g05890, At4g07450, At3g30630, At3g43100, At2g09960, At3g30550, At1g39430, At2g10460, At4g03640, At5g35250 Length = 439 Score = 30.7 bits (66), Expect = 0.97 Identities = 12/32 (37%), Positives = 21/32 (65%) Frame = -2 Query: 678 KPKFWRQILQSPIIYFLLANYSVHMHIIRQTG 583 KP+FW +I +++A + +H+HI+ QTG Sbjct: 253 KPRFWCEICNG-FAKYVVAKFWLHLHIMGQTG 283 >At3g28770.1 68416.m03591 expressed protein Length = 2081 Score = 29.9 bits (64), Expect = 1.7 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = +1 Query: 94 SESSTQINHNKEEQSTTKIPDSVKKIILMEKDNEANANRKSRID 225 SES N K + +T D K ILM+ D++A+++ S+ D Sbjct: 1254 SESKEAENQQKSQATTQADSDESKNEILMQADSQADSHSDSQAD 1297 Score = 29.9 bits (64), Expect = 1.7 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = +1 Query: 94 SESSTQINHNKEEQSTTKIPDSVKKIILMEKDNEANANRKSRID 225 SES N K + +T D K ILM+ D++A+++ S+ D Sbjct: 1365 SESKEAENQQKSQATTQADSDESKNEILMQADSQADSHSDSQAD 1408 Score = 28.3 bits (60), Expect = 5.2 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = +1 Query: 94 SESSTQINHNKEEQSTTKIPDSVKKIILMEKDNEANANRKSRID 225 SES N K + +T D K ILM+ D++A+ + S+ D Sbjct: 1476 SESKEAENQQKSQATTQGESDESKNEILMQADSQADTHANSQGD 1519 >At5g35250.1 68418.m04179 hypothetical protein includes At2g05890, At4g07450, At3g30630, At3g43100, At2g09960, At3g30550, At1g39430, At2g10460, At4g03640, At5g35250 Length = 384 Score = 28.7 bits (61), Expect = 3.9 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = -2 Query: 678 KPKFWRQILQSPIIYFLLANYSVHMHIIRQTG 583 KP+FW +I ++A + +H+HI+ QTG Sbjct: 213 KPRFWCEICNG-FAKSVVAKFWLHLHIMDQTG 243 >At4g03300.1 68417.m00451 Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At3g24380, At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730, At1g27790 , At1g34740, At1g27780, At5g36850, At3g42730, At1g52020, At3g24390, At4g05280, At1g25886 Length = 1285 Score = 28.7 bits (61), Expect = 3.9 Identities = 13/53 (24%), Positives = 34/53 (64%), Gaps = 1/53 (1%) Frame = +1 Query: 94 SESSTQINHNKEEQSTTKIPDSVKKIILMEKDNEANANRKSR-IDLNALPTRQ 249 S+++ + +E++++ K+P VKK ++ E+D+ + K++ + + +PT+Q Sbjct: 950 SDNAAAVEAKEEKKASPKVPKKVKKQLIYEQDDAHPHDFKAKTVLVPDVPTQQ 1002 >At4g08150.1 68417.m01346 homeobox protein knotted-1 like 1 (KNAT1) identical to homeobox protein knotted-1 like 1 (KNAT1) SP:P46639 from [Arabidopsis thaliana] Length = 398 Score = 28.3 bits (60), Expect = 5.2 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = -2 Query: 546 NLSNLHHCHSLFIHQMSVQQNVSSHCF 466 N +N HH H LF H S+ + +CF Sbjct: 54 NNNNHHHQHMLFPHMSSLLPQTTENCF 80 >At2g14770.2 68415.m01669 Ulp1 protease family protein similar to At3g24380, At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730, At1g27790, At1g34740, At1g27780, At5g36850, At3g42730, At1g52020, At3g24390, At4g05280, At1g25886, At4g03300; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain Length = 1158 Score = 28.3 bits (60), Expect = 5.2 Identities = 10/33 (30%), Positives = 23/33 (69%) Frame = +1 Query: 94 SESSTQINHNKEEQSTTKIPDSVKKIILMEKDN 192 S+++ + +E++S+ K+P VKK ++ E+D+ Sbjct: 858 SDNAAAVEAEEEKKSSPKVPKKVKKQLVYEQDD 890 >At2g14770.1 68415.m01668 Ulp1 protease family protein similar to At3g24380, At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730, At1g27790, At1g34740, At1g27780, At5g36850, At3g42730, At1g52020, At3g24390, At4g05280, At1g25886, At4g03300; contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain Length = 1139 Score = 28.3 bits (60), Expect = 5.2 Identities = 10/33 (30%), Positives = 23/33 (69%) Frame = +1 Query: 94 SESSTQINHNKEEQSTTKIPDSVKKIILMEKDN 192 S+++ + +E++S+ K+P VKK ++ E+D+ Sbjct: 839 SDNAAAVEAEEEKKSSPKVPKKVKKQLVYEQDD 871 >At1g34740.1 68414.m04319 Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain; similar to At3g24380, At5g36840, At5g35010, At3g42740, At4g05290, At2g14770, At3g43390, At2g05560, At4g08880, At1g34730, At1g27790, At1g27780, At5g36850, At3g42730, At1g52020, At3g24390, At4g05280, At1g25886, At4g03300 Length = 1383 Score = 28.3 bits (60), Expect = 5.2 Identities = 10/33 (30%), Positives = 23/33 (69%) Frame = +1 Query: 94 SESSTQINHNKEEQSTTKIPDSVKKIILMEKDN 192 S+++ + +E++S+ K+P VKK ++ E+D+ Sbjct: 810 SDNAAAVEAKEEKKSSPKVPKKVKKQLVYEQDD 842 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,409,148 Number of Sequences: 28952 Number of extensions: 273138 Number of successful extensions: 642 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 628 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 642 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1496852856 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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