Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30366
(901 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 33 0.23
07_01_0479 + 3606663-3607448 32 0.54
12_02_0299 - 17051570-17052474,17053542-17053755 31 0.94
10_01_0274 - 2901033-2901778,2902475-2902634 31 0.94
05_07_0031 - 27183252-27183317,27183542-27184282 31 1.2
04_03_0925 - 20856628-20856690,20856786-20856845,20856924-208570... 31 1.2
02_03_0381 - 18339290-18339994,18340083-18340103,18341925-183419... 31 1.2
01_06_0426 + 29270744-29271064 31 1.2
07_03_1067 + 23728642-23728690,23728832-23729010 30 2.2
09_04_0684 - 19442335-19442990,19443774-19443839,19443935-194440... 29 3.8
09_01_0050 + 853712-855368,855440-856113 29 3.8
07_03_1136 + 24218601-24218734,24218769-24219906 29 3.8
05_04_0433 - 21181713-21183998 29 3.8
03_06_0327 - 33158131-33158315,33158586-33158639,33159149-331591... 29 3.8
02_04_0407 + 22645775-22645865,22645998-22646269 29 3.8
01_06_0046 + 25943183-25943590 29 3.8
01_01_0668 - 5109476-5110112,5110196-5110439,5110519-5110917,511... 29 3.8
07_02_0031 - 12035450-12035709,12036186-12036699 29 5.0
05_01_0142 - 940421-940701,941262-941574 29 5.0
01_01_0468 + 3454254-3454574,3454688-3454828,3454907-3455059 29 5.0
09_06_0172 + 21329904-21331512,21331595-21331740,21332333-213325... 29 6.7
06_02_0315 - 14230234-14232771 29 6.7
06_01_0486 - 3455030-3455770 29 6.7
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 29 6.7
02_05_0504 - 29590852-29591862 29 6.7
02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184 29 6.7
01_05_0107 + 18172644-18172974,18173162-18173985 29 6.7
10_08_0495 - 18318028-18320399,18322450-18322981,18323097-183232... 28 8.8
06_03_1297 + 29110432-29110542,29110613-29110804,29110893-291109... 28 8.8
05_02_0152 + 7126802-7127315,7127451-7129190,7130718-7131778 28 8.8
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 28 8.8
02_05_0390 + 28557722-28557937,28558440-28558514,28558597-285587... 28 8.8
02_03_0056 - 14525491-14525833,14525882-14526125,14526447-145265... 28 8.8
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 28 8.8
01_01_0082 + 625198-625719 28 8.8
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 33.5 bits (73), Expect = 0.23
Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Frame = -1
Query: 886 PTVKAPPPFLRVKIPRGPRFWVP-TGCPPPFKPGNRLPASW---PEWAGVGVPTRGGLHR 719
P V APP + G P G PPP PG+ P W P +A P G
Sbjct: 396 PAVPAPPTYPPADPAAGGYTSQPYMGAPPPPPPGSYAPVPWGQPPPYASYPPPPPGSSMY 455
Query: 718 GPYPP 704
P PP
Sbjct: 456 NPPPP 460
>07_01_0479 + 3606663-3607448
Length = 261
Score = 32.3 bits (70), Expect = 0.54
Identities = 30/77 (38%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Frame = -1
Query: 901 PLAFLPTVKAPPPFLRVKIPRGPR----FWVPTGCPPPFKPGNRLPASWPEWAG---VGV 743
P+A+ P V PPP R P+ F P G PP F PG P P G +G
Sbjct: 160 PVAY-PQVVRPPPGQMPPPMRPPQMPIPFQRPPGVPPAF-PGGPPPPPGPFMRGPPPMGP 217
Query: 742 P-TRGGLHRGPYPPGKR 695
P R G+ GP PPG R
Sbjct: 218 PQVRPGMPGGP-PPGMR 233
Score = 32.3 bits (70), Expect = 0.54
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = -1
Query: 886 PTVKAPPPF----LRVKIPRGPRFWVPTGCPPP-FKPGNRLPASWPEWAGVGVP 740
P ++ PPP +R +P GP + G PPP F+PG P P+ G P
Sbjct: 207 PFMRGPPPMGPPQVRPGMPGGPPPGMRPGMPPPPFRPGMPPPPPGPQQPGQNPP 260
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 31.5 bits (68), Expect = 0.94
Identities = 22/66 (33%), Positives = 25/66 (37%)
Frame = -1
Query: 901 PLAFLPTVKAPPPFLRVKIPRGPRFWVPTGCPPPFKPGNRLPASWPEWAGVGVPTRGGLH 722
P+ FL PPPFL +P P F P PPP P P W P +
Sbjct: 228 PIPFL--TPPPPPFLPFPLPPIP-FLTPPSPPPPAFPFPLPPWPWAPPPAFPFPHLPPIF 284
Query: 721 RGPYPP 704
P PP
Sbjct: 285 SPPSPP 290
>10_01_0274 - 2901033-2901778,2902475-2902634
Length = 301
Score = 31.5 bits (68), Expect = 0.94
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -1
Query: 844 PRGPRFWVP-TGCPPPFKPGNRLPAS-WPEWA-GVGVPTRGGLHRGP 713
P P + P T CPPP PG P+ WP + G P+ ++R P
Sbjct: 252 PSTPEYGTPATACPPPTAPGYGSPSPFWPPVSPAYGTPSPTPIYRPP 298
>05_07_0031 - 27183252-27183317,27183542-27184282
Length = 268
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -2
Query: 813 GAPPPLNPETAYRLPGQNGPGLGYPPGGDS 724
G PPP P A+RLP P + P GGD+
Sbjct: 24 GQPPPPPPTPAHRLPPTVLPVVALPAGGDA 53
>04_03_0925 -
20856628-20856690,20856786-20856845,20856924-20857001,
20857127-20857192,20857542-20858675,20858991-20860283
Length = 897
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +2
Query: 716 PPVESPPGGYPNPGPFWPGSR*AVSGFKGGGAPRWNP 826
PP E PP P P P P A SG + P+ NP
Sbjct: 8 PPPEHPPTPAPAPAPASPPPHPAASGNEAAAPPKPNP 44
>02_03_0381 -
18339290-18339994,18340083-18340103,18341925-18341982,
18342084-18342220,18342480-18342650
Length = 363
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -1
Query: 841 RGPRFWVPTGCPPPFKPGNRLPASWPEWAGVGVPTRGGLHRGPYPP 704
RGP P G PPP+ P + +P P W P GL+ P+PP
Sbjct: 192 RGP----PPGAPPPWSPHSGVP---PPWNPHSAPPSQGLY--PHPP 228
>01_06_0426 + 29270744-29271064
Length = 106
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -3
Query: 881 RKGPPPFFKGKNSKGPQVLGSNGVPPPL*TRKPLTGFLARMGRGWGTHP 735
R+ PPP +G + +G ++ V PP R+PL R G GW P
Sbjct: 20 RRVPPP--RGSHEEGAAIVPEKKVMPPRRERRPLGKGHRRPGGGWYEAP 66
>07_03_1067 + 23728642-23728690,23728832-23729010
Length = 75
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = -2
Query: 843 QGAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPP 736
QG PG + G PPP P Y P Q P GYPP
Sbjct: 16 QGYPG---KDGYPPPGYPPAGYP-PAQGYPPAGYPP 47
>09_04_0684 -
19442335-19442990,19443774-19443839,19443935-19444032,
19444787-19445157
Length = 396
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = -2
Query: 846 FQGAPGFGFQRGAPPPLNPETAYRLPGQNGPG--LGYPPGGD--STGGPTHRVKG 694
+QG G G+Q G PPP PG +G G Y GGD + G P + G
Sbjct: 337 YQGG-GPGYQGGNPPPYQGGNPGYAPGYHGQGGNPSYQQGGDNYNAGVPAYERDG 390
>09_01_0050 + 853712-855368,855440-856113
Length = 776
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +2
Query: 716 PPVESPPGGYPNPGPFWPGSR*AVSGFKGGGAPRWNPKPGAPWNFY 853
P + PPG P GP G AV+ ++ + NPK A W+ Y
Sbjct: 642 PDLSPPPGASPLAGPSGSGDT-AVAQYQAPEGVK-NPKANAKWDVY 685
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +2
Query: 731 PPGGYPNPGPFWPGSR*AVSGFKGGGAPRWNPKPG 835
PPGG PGP G G GGG P P G
Sbjct: 91 PPGGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAG 125
>05_04_0433 - 21181713-21183998
Length = 761
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 871 PPPFLRVKIPRGPRFWVPTGCPPP-FKPGNRLPASWPEWAGVGVPTRG 731
P P + RGP PT P PG+ + ASWPE V V T G
Sbjct: 475 PAPVVATYSSRGPSASCPTVLKPDVLAPGSLILASWPE--NVSVSTVG 520
>03_06_0327 -
33158131-33158315,33158586-33158639,33159149-33159180,
33159275-33159369,33159466-33159539,33159643-33159778,
33159874-33159937,33160017-33160079,33160160-33160299,
33160487-33160627,33160747-33160868,33160947-33161112,
33161194-33161313,33161580-33161651,33161787-33161843,
33162036-33162152,33162231-33162369,33162794-33162900,
33162972-33163081,33163172-33163305,33163397-33163546,
33163635-33163840,33166123-33166818
Length = 1059
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = -1
Query: 826 WVPTGCPP-PFKPGNRLPASWPEWAGVGVPTRGGLHRGPYPPG 701
W P G P P P + P P G P H+G Y PG
Sbjct: 48 WPPPGMTPRPGPPQPQYPRPGPPAVVYGAPMPAAHHQGAYQPG 90
>02_04_0407 + 22645775-22645865,22645998-22646269
Length = 120
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +2
Query: 704 RWVGPPVESPPGGYPNPGPFWPGSR*AVSGFKGG 805
R G P GGYP G W G R G++GG
Sbjct: 64 RGYGYPGRGGGGGYPGGGGGWHGCRCCGYGYRGG 97
>01_06_0046 + 25943183-25943590
Length = 135
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -1
Query: 886 PTVKAPPPFLRVKIPRGPRFWVPTGCPPPFKPGNRLPASWPEWAGVGVPTRGGLHRGPYP 707
P + PPP+ P P ++ + CPPP PA++ ++ G RG L+ P
Sbjct: 53 PALPPPPPYYYYS-PPPPAYYPGSYCPPP-------PAAYVQFGGGAQSGRGPLY--PQD 102
Query: 706 PG 701
PG
Sbjct: 103 PG 104
>01_01_0668 -
5109476-5110112,5110196-5110439,5110519-5110917,
5111390-5111668,5111886-5112257,5112371-5112475,
5112832-5112909,5112990-5113199,5113287-5113406,
5113508-5113606,5113685-5113750,5113914-5114141,
5114216-5114521,5115324-5115381
Length = 1066
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -1
Query: 874 APPPFLRVKIPRGPRFWVPTGCPPPFKPGNRLPASWPEWA 755
APPP R GP PT P P +PG + P++ P WA
Sbjct: 382 APPPMFR-----GPHI-SPTMPPIPPQPGPKAPSAHPIWA 415
>07_02_0031 - 12035450-12035709,12036186-12036699
Length = 257
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 694 TFYPVGRAPCGVPPGWVPQPR 756
T +P+G P G PGW PR
Sbjct: 167 TLFPIGWEPTGDAPGWTQAPR 187
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 731 PPGGYPNPGPFWPGSR*AVSGFKGG 805
PPGGYP G + P SG +GG
Sbjct: 82 PPGGYPQHGGYPPAGYPGSSGHQGG 106
>01_01_0468 + 3454254-3454574,3454688-3454828,3454907-3455059
Length = 204
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/63 (31%), Positives = 24/63 (38%)
Frame = -1
Query: 862 FLRVKIPRGPRFWVPTGCPPPFKPGNRLPASWPEWAGVGVPTRGGLHRGPYPPGKRCTLA 683
FLR K+ R P W PPP + W A + P GG +P T A
Sbjct: 79 FLRSKLARFPSIWRRKKPPPPAR-ATAASQLWRNRATMAWPAHGGRR---WPARTTATAA 134
Query: 682 FYL 674
YL
Sbjct: 135 LYL 137
>09_06_0172 +
21329904-21331512,21331595-21331740,21332333-21332556,
21333689-21334448
Length = 912
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -2
Query: 819 QRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGG 715
Q G PPP A P +G G GY P D GG
Sbjct: 164 QMGPPPPYGSGYAPPPPYGSGYGYGYGPAPDYGGG 198
>06_02_0315 - 14230234-14232771
Length = 845
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -2
Query: 813 GAPPPLNPETAYRL--PGQNGPGLGYPPGGDSTGGP 712
GAP L P ++ +L PG+ G G G G DS P
Sbjct: 36 GAPATLRPSSSSKLLSPGRTGGGAGAVAGADSAPVP 71
>06_01_0486 - 3455030-3455770
Length = 246
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 886 PTVKAPPPFLRVKIPRGPRFWVPTGCPPPFKP 791
P V +PPP++ IP +VP PPP P
Sbjct: 91 PYVPSPPPYVPPYIPPPTPPYVPPYIPPPTPP 122
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 886 PTVKAPPPFLRVKIPRGPRFWVPTGCPPPFK 794
PT +PPP++ P P +VP PP K
Sbjct: 127 PTPPSPPPYVPPPTPPSPPPYVPPPSPPATK 157
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGG 715
GAP G A P +P Y P + PG+G P GG + G
Sbjct: 214 GAPRGGSATPAMIPGHPGAFYPFPPPSLPGVGPPRGGGAIPG 255
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = -2
Query: 834 PGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDST 721
PGF QR PP P P PG G P GG +T
Sbjct: 187 PGFYMQRPPTPPPTPRGFP--PPLPSPGAGAPRGGSAT 222
>02_05_0504 - 29590852-29591862
Length = 336
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 792 PETAYRLPGQNGPGLGYPPGGDSTGGPTHRVKGAP 688
P ++ +P + G G GG +GGPT R +G P
Sbjct: 74 PSSSAMVPVEGGSGSA---GGSGSGGPTRRPRGRP 105
>02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184
Length = 544
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 844 PRGPRFWVPTGCPPPFKPGNRLPASWP 764
PR P W P+ P P+ PG + S P
Sbjct: 264 PRRPNSWAPSPAPWPYTPGQQAKFSPP 290
>01_05_0107 + 18172644-18172974,18173162-18173985
Length = 384
Score = 28.7 bits (61), Expect = 6.7
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -1
Query: 874 APPPFLR-VKIPRGPRFWVPTGCPPPFKPGNRLPASWPEWAGVGVP 740
APPP L V++ R P + P PG+R PA +A G+P
Sbjct: 13 APPPLLPPVRLSRSPCYPHQVFLPLQPYPGHRPPALLTAYANAGLP 58
>10_08_0495 -
18318028-18320399,18322450-18322981,18323097-18323200,
18323653-18323701,18323979-18324119,18324889-18324957,
18325048-18325137,18325301-18326251,18326831-18327502
Length = 1659
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +2
Query: 719 PVESPPGGYPNPGPFWPGSR*AVS-GFKGGGAPRWNPKPGAP 841
P PPGG PG P R A S + GAP P GAP
Sbjct: 766 PYGVPPGGDSRPGYSQPEQRPAYSQPYPPYGAPPQQPPYGAP 807
>06_03_1297 +
29110432-29110542,29110613-29110804,29110893-29110976,
29111115-29111191,29111410-29111476,29111640-29111697,
29111823-29111890,29111981-29112043,29112549-29112651,
29112685-29112845,29112934-29113053,29113300-29113356,
29113646-29113809,29113896-29114055,29114720-29114803,
29115074-29115196,29115368-29115498,29115577-29115658,
29115876-29115963,29116143-29116186,29116264-29116387,
29116450-29116537,29116649-29116849,29116894-29117104,
29117383-29117454,29117587-29117790,29117959-29118087
Length = 1021
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 745 VPTRGGLHRGPYPPGKRCTLAFYLSSH 665
+P G P PP +R AFYL+ H
Sbjct: 1 MPPAGDAAHAPPPPHRRLVFAFYLTGH 27
>05_02_0152 + 7126802-7127315,7127451-7129190,7130718-7131778
Length = 1104
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 825 GFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDST 721
G G+PP +P T RL G + G+ GG +T
Sbjct: 748 GVAEGSPPWSSPSTRRRLSGSSAKPDGHKDGGGAT 782
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 4/36 (11%)
Frame = -2
Query: 807 PPPLNPETAYRLPGQNGPGLGYPP----GGDSTGGP 712
PPP P A P GPG G PP G GGP
Sbjct: 349 PPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGP 384
>02_05_0390 +
28557722-28557937,28558440-28558514,28558597-28558766,
28559046-28559124,28559320-28559516,28560300-28560387,
28560453-28560679,28560763-28560919,28561467-28561517
Length = 419
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -2
Query: 411 GCRSALCIDNCQYINIYGCELIIESLNKFTGEFRYFFGFNSHF 283
GC +C+ NC Y C I+ F G FG ++H+
Sbjct: 323 GCNKMICV-NCGGYFCYRCNQAIKGYEHFWGGNCVLFGTHAHY 364
>02_03_0056 -
14525491-14525833,14525882-14526125,14526447-14526591,
14526757-14527121,14527323-14527722
Length = 498
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +1
Query: 700 YPVGRAPCGVPPGWVPQPRPILARKPVSGFRV*RGGGTPLEPKTW 834
Y G AP G PGW PR + + R G P W
Sbjct: 352 YEAGWAPTGDAPGWTQAPRHSIGVSTWASASEDRSSGVPPSLSEW 396
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 28.3 bits (60), Expect = 8.8
Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +2
Query: 689 GAPFTRWVGPPVESPPGGYPNPG--PFWPGSR*AVSGFKGGGAPRWNPKPGAPWNFYP 856
GAP PP SP G P PG P G +G GAP P PGAP +P
Sbjct: 632 GAPPQGQKAPPNTSPYGQAPPPGSAPGGYGQYGYSQNQQGYGAP--PPYPGAPAASHP 687
>01_01_0082 + 625198-625719
Length = 173
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = +2
Query: 716 PPVESPPGGYPNPGPFWPGSR*AVSGFKGGG---APRWNPKPG 835
PP PP YP P P + + GGG P +NP PG
Sbjct: 74 PPPSPPPVAYPPPTT--PSTNCPPPPYGGGGYNPTPSYNPTPG 114
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,746,414
Number of Sequences: 37544
Number of extensions: 677019
Number of successful extensions: 2463
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 2092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2428
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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