Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30366
(901 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 37 0.023
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 36 0.030
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 36 0.052
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 34 0.12
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 33 0.21
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 33 0.21
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 33 0.37
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 32 0.49
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 0.85
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.85
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.85
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.85
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 31 1.1
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 31 1.1
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 1.1
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.5
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.5
U80441-8|AAB37656.1| 284|Caenorhabditis elegans Dumpy : shorter... 31 1.5
U40937-1|AAA81693.1| 396|Caenorhabditis elegans Collagen protei... 31 1.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.5
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.5
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.5
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 31 1.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.5
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 31 1.5
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 31 1.5
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 30 2.0
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.0
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 30 2.0
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 30 2.0
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 30 2.6
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 30 2.6
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 30 2.6
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 30 2.6
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 30 2.6
U12966-6|AAM48533.1| 783|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 30 2.6
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 30 2.6
Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 29 3.4
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 29 3.4
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 29 3.4
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 29 3.4
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 29 3.4
U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helica... 29 3.4
U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helica... 29 3.4
U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protei... 29 3.4
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 29 3.4
L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen... 29 3.4
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 29 3.4
Z81050-3|CAB02849.1| 291|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical pr... 29 4.5
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 29 4.5
U53155-1|AAC48268.1| 393|Caenorhabditis elegans Oocyte maturati... 29 4.5
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical ... 29 4.5
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 29 4.5
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.0
U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protei... 29 6.0
U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protei... 29 6.0
U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defecti... 29 6.0
U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defecti... 29 6.0
U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defecti... 29 6.0
AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity... 29 6.0
AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein. 29 6.0
AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical ... 29 6.0
AF100656-8|AAF99965.1| 210|Caenorhabditis elegans Hypothetical ... 29 6.0
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 29 6.0
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 6.0
Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z81567-3|CAB04587.1| 301|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 28 7.9
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 7.9
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 28 7.9
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 28 7.9
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 28 7.9
L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protei... 28 7.9
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 28 7.9
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 28 7.9
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 28 7.9
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 36.7 bits (81), Expect = 0.023
Identities = 20/51 (39%), Positives = 23/51 (45%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGGPTHRVKGAP 688
GAPG G GAP P P+ A PG PG PG + + GAP
Sbjct: 174 GAPGQGSGAGAPGPAGPKGASGAPG--NPGQAGAPGQPGADAQSESIPGAP 222
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 36.3 bits (80), Expect = 0.030
Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNGP-GLGYPPGGDSTGG 715
GAPG G+ G P P P PGQ GP G PG D T G
Sbjct: 271 GAPGGGYGVGPPGPPGPSGRPGAPGQPGPDGQPGAPGNDGTPG 313
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNG-PGLGYPPGGDSTGG 715
GAP FG GAP P PGQ G PG PG ++ GG
Sbjct: 209 GAPSFGGGVGAPGAPGPAGDAGSPGQPGAPGQPGRPGKNAQGG 251
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 35.5 bits (78), Expect = 0.052
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +1
Query: 709 GRAPCGV--PPGWV--PQPRPILARKPVSGFRV*RGGGTPLEPKTWGPLEFLPLKKGGGP 876
GRAP PP + P P+P +P +G + R GG P+ P G + P + GG P
Sbjct: 66 GRAPSARARPPSAMRAPPPQPTYENRPTTGMSM-RNGGPPVPPSRSGMIPVPPSRSGGPP 124
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/51 (37%), Positives = 21/51 (41%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGGPTHRVKGAP 688
G PGFG GAP P P+ PG PG PG + GAP
Sbjct: 158 GQPGFGSGFGAPGPAGPKGQRGAPGH--PGQAGAPGQPGVDAQSQSTPGAP 206
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +2
Query: 713 GPPVESPPGGYPNPGPFWPGSR*AVSGFKGGGAPRWNPKPGAP 841
GPP S G P GP +PG+ + G P N PGAP
Sbjct: 213 GPPGSSGAPGAPG-GPGFPGAPGSKGPSGAPGQPGANGNPGAP 254
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNG-PGLGYPPGGDSTGGPTHRVKGAP 688
G PG + G P + PG+ G PG+ PPG DS GG +KG P
Sbjct: 168 GHPGLPGRPGKPGRVGDAGPQGEPGEQGEPGIKGPPGDDSIGGT--GIKGPP 217
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNG-PGLGYPPGGDSTGGPTHRVKGAP 688
G PG + G P + PG+ G PG+ PPG DS GG +KG P
Sbjct: 168 GHPGLPGRPGKPGRVGDAGPQGEPGEQGEPGIKGPPGDDSIGGT--GIKGPP 217
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 32.7 bits (71), Expect = 0.37
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -1
Query: 886 PTVKAPPPFLRVKIPRGPRFWVPTGCPPP 800
P K P P LR K P G R W +G PPP
Sbjct: 205 PPPKPPMPDLRTKEPIGIRSWNGSGIPPP 233
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 32.3 bits (70), Expect = 0.49
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNG-PGLGYPPGGDSTGG 715
GAPG Q GAP P P A PG +G PG PG G
Sbjct: 238 GAPGGPGQAGAPGPKGPSGAPGQPGADGNPGAPGQPGQSGGAG 280
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGGPTHRVKGAP 688
G G G GAP P P+ A PG PG PG + + GAP
Sbjct: 174 GQAGQGSGAGAPGPAGPKGAPGAPG--NPGQAGAPGQPGSDAQSESSPGAP 222
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 32.3 bits (70), Expect = 0.49
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNG-PGLGYPPGGDSTGG 715
GAPG Q GAP P P A PG +G PG PG G
Sbjct: 238 GAPGGPGQAGAPGPKGPSGAPGQPGADGNPGAPGQPGQSGGAG 280
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGGPTHRVKGAP 688
G G G GAP P P+ A PG PG PG + + GAP
Sbjct: 174 GQAGQGSGAGAPGPAGPKGAPGAPG--NPGQAGAPGQPGSDAQSESSPGAP 222
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 32.3 bits (70), Expect = 0.49
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNG-PGLGYPPGGDSTGG 715
GAPG Q GAP P P A PG +G PG PG G
Sbjct: 238 GAPGGPGQAGAPGPKGPSGAPGQPGADGNPGAPGQPGQSGGAG 280
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGGPTHRVKGAP 688
G G G GAP P P+ A PG PG PG + + GAP
Sbjct: 174 GQAGQGSGAGAPGPAGPKGAPGAPG--NPGQAGAPGQPGSDAQSESSPGAP 222
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.5 bits (68), Expect = 0.85
Identities = 25/69 (36%), Positives = 30/69 (43%)
Frame = -1
Query: 901 PLAFLPTVKAPPPFLRVKIPRGPRFWVPTGCPPPFKPGNRLPASWPEWAGVGVPTRGGLH 722
P+ F P K PPP + G P PPPF G +S+P P RGG+H
Sbjct: 734 PMGFDPN-KPPPPMFQQGFNAG----AP---PPPFGRGAGPMSSFPP------PPRGGMH 779
Query: 721 RGPYPPGKR 695
P PP R
Sbjct: 780 HMPPPPSFR 788
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.85
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 692 APFTRWVG-PPVESPPGGYPNPGPFWPGSR*AVSGFKGGGAPRWNPKPGAP 841
AP R G PP SPP G P+ G PG + +G PR +P G+P
Sbjct: 448 APEDRPTGSPPTGSPPTGRPHRG--GPGKSESSESREGPRGPRRSPPTGSP 496
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.85
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 692 APFTRWVG-PPVESPPGGYPNPGPFWPGSR*AVSGFKGGGAPRWNPKPGAP 841
AP R G PP SPP G P+ G PG + +G PR +P G+P
Sbjct: 469 APEDRPTGSPPTGSPPTGRPHRG--GPGKSESSESREGPRGPRRSPPTGSP 517
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.85
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 692 APFTRWVG-PPVESPPGGYPNPGPFWPGSR*AVSGFKGGGAPRWNPKPGAP 841
AP R G PP SPP G P+ G PG + +G PR +P G+P
Sbjct: 454 APEDRPTGSPPTGSPPTGRPHRG--GPGKSESSESREGPRGPRRSPPTGSP 502
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNG-PGLGYPPGGDSTGGP 712
G PG RG P P P+ Y G G PG PPG GP
Sbjct: 211 GPPGPKGPRGTPGPTGPKNFYITSGPPGPPGPPGPPGNPGGIGP 254
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 689 GAPFTRWVGPPVESPPGGYPNPGPFWPGSR*AVSGFKGG 805
G P + G P PGGYP+ GP PG + G+ GG
Sbjct: 309 GMPGSFAPGAPGPGGPGGYPSGGPGMPGMQ---GGYPGG 344
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
Frame = -2
Query: 831 GFGFQRGAPPPLNPETAYRLPGQNGPGLG-------YPPGGDSTGGP 712
G G R PP + A +PG PG G +PPG GGP
Sbjct: 262 GPGMPRAFPPGASAPVAPGMPGAFPPGQGGPGMPGSFPPGAPGPGGP 308
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/47 (42%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Frame = +2
Query: 713 GPPVESPPGGYPNPGPFWPGSR*AVSGFKGGGAPRWNP----KPGAP 841
GPP PPGG PG G R G G PR P KPG P
Sbjct: 172 GPP--GPPGGPGGPGEGGDGGRPGNPGRPGPAGPRGEPGTEYKPGQP 216
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Frame = -2
Query: 840 GAPGFGFQRGAPP-----PLNPETAYRLPGQNGPGLGYPPGGDSTGGP 712
GAPG G PP PL P P + PG PPG D GP
Sbjct: 113 GAPGLNGNPGRPPKEPCEPLTPPPCKPCP-EGPPGPAGPPGPDGNKGP 159
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Frame = +2
Query: 713 GPPVESPPGGYPN----PGPFWPGSR*AVSGFKGGGAPRWNPKPGAP 841
GPP P G P GP PG + +G G P+PGAP
Sbjct: 164 GPPGPEGPNGEPGNKGPAGPPGPGGKPGPAGPPGENGNNGEPQPGAP 210
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -2
Query: 843 QGAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGG 715
QG PG G P P P PG GPG P G G
Sbjct: 214 QGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAG 256
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = +2
Query: 680 KCQGAPFTRWVGPPVESPPGGYPNP-GPFWPGSR*AVSGFKGGGAPRWNPKPGAP 841
K AP PP + PGG P P GP P G G A P P P
Sbjct: 133 KGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGP 187
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -2
Query: 843 QGAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGG 715
QG PG G P P P PG GPG P G G
Sbjct: 214 QGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAG 256
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = +2
Query: 680 KCQGAPFTRWVGPPVESPPGGYPNP-GPFWPGSR*AVSGFKGGGAPRWNPKPGAP 841
K AP PP + PGG P P GP P G G A P P P
Sbjct: 133 KGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGP 187
>U80441-8|AAB37656.1| 284|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 5 protein.
Length = 284
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/61 (40%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Frame = -2
Query: 846 FQGAPGFGFQRGAP-----PPLNPETAYR-LPGQNG-PGLGYPPGGDS-TGGPTHRVKGA 691
FQG PG +RG P P + + PGQ+G PGL PPG D TG V G
Sbjct: 156 FQGLPGDAGKRGTPGKDGEPGRVGDIGDQGTPGQDGQPGLAGPPGRDGLTGKGQPGVAGR 215
Query: 690 P 688
P
Sbjct: 216 P 216
>U40937-1|AAA81693.1| 396|Caenorhabditis elegans Collagen protein
164 protein.
Length = 396
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +2
Query: 716 PPVESPPGGYPNPGPFWPGSR*AVSGFKGGGAPRWNPKPGAP 841
P + P G + +PGP P SG G G + P P P
Sbjct: 185 PGDDGPEGDHGHPGPMGPAGEKGTSGADGKGFAKGAPGPKGP 226
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNG-PGLGYPPGGDSTGGPT 709
GA G GF +GAP P P L G G PG G G T
Sbjct: 210 GADGKGFAKGAPGPKGPTGMDGLAGDEGLPGERGEDGSAGAQGET 254
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/40 (47%), Positives = 19/40 (47%)
Frame = +2
Query: 716 PPVESPPGGYPNPGPFWPGSR*AVSGFKGGGAPRWNPKPG 835
PP PPGG P P P P GFKGG P P PG
Sbjct: 759 PPPPPPPGGCPPPPPPPP-----PGGFKGGPPP--PPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/40 (47%), Positives = 19/40 (47%)
Frame = +2
Query: 716 PPVESPPGGYPNPGPFWPGSR*AVSGFKGGGAPRWNPKPG 835
PP PPGG P P P P GFKGG P P PG
Sbjct: 759 PPPPPPPGGCPPPPPPPP-----PGGFKGGPPP--PPPPG 791
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -2
Query: 843 QGAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGG 715
QG PG G P P P PG GPG P G G
Sbjct: 214 QGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAG 256
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = +2
Query: 680 KCQGAPFTRWVGPPVESPPGGYPNP-GPFWPGSR*AVSGFKGGGAPRWNPKPGAP 841
K AP PP + PGG P P GP P G G A P P P
Sbjct: 133 KGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGP 187
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -2
Query: 843 QGAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGG 715
QG PG G P P P PG GPG P G G
Sbjct: 214 QGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAG 256
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = +2
Query: 680 KCQGAPFTRWVGPPVESPPGGYPNP-GPFWPGSR*AVSGFKGGGAPRWNPKPGAP 841
K AP PP + PGG P P GP P G G A P P P
Sbjct: 133 KGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGP 187
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/44 (47%), Positives = 23/44 (52%)
Frame = -2
Query: 843 QGAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGGP 712
QG PG GF G PPP P AY P P +G PP G + G P
Sbjct: 427 QGGPG-GF--GPPPPGGPG-AYGPPPTGFPPVGAPPPG-AAGAP 465
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = -2
Query: 810 APPPLNPETAYRLPGQNGP--GLGYPPGGDSTGGPTHRVKGAP 688
APP + P Q P G G PP G GGP GAP
Sbjct: 309 APPQQQQQQFGAPPPQGAPQQGFGAPPQGPPQGGPPQGSFGAP 351
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +2
Query: 695 PFTRWVGPPVESPPGGYPNPGPFWPGSR*AVSGFKGGGAPRWNPKPGAPWNFYP 856
P + + P PGGY P P PG+ + +GG P PG P + P
Sbjct: 393 PPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGP 446
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/51 (35%), Positives = 20/51 (39%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGGPTHRVKGAP 688
G PG G GAP P P+ PG PG PG + GAP
Sbjct: 179 GQPGHGGGSGAPGPAGPKGQRGAPGH--PGQAGSPGRPGVDAQSQSNPGAP 227
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/40 (47%), Positives = 19/40 (47%)
Frame = +2
Query: 716 PPVESPPGGYPNPGPFWPGSR*AVSGFKGGGAPRWNPKPG 835
PP PPGG P P P P GFKGG P P PG
Sbjct: 342 PPPPPPPGGCPPPPPPPP-----PGGFKGGPPP--PPPPG 374
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/66 (33%), Positives = 25/66 (37%)
Frame = -1
Query: 901 PLAFLPTVKAPPPFLRVKIPRGPRFWVPTGCPPPFKPGNRLPASWPEWAGVGVPTRGGLH 722
P F P PPP R P P ++ G PPPF P P + P
Sbjct: 292 PFGFFP----PPP--RGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFR 345
Query: 721 RGPYPP 704
GPYPP
Sbjct: 346 GGPYPP 351
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/66 (33%), Positives = 25/66 (37%)
Frame = -1
Query: 901 PLAFLPTVKAPPPFLRVKIPRGPRFWVPTGCPPPFKPGNRLPASWPEWAGVGVPTRGGLH 722
P F P PPP R P P ++ G PPPF P P + P
Sbjct: 292 PFGFFP----PPP--RGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFR 345
Query: 721 RGPYPP 704
GPYPP
Sbjct: 346 GGPYPP 351
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +2
Query: 719 PVESPPGGYPNPGPFWPGSR*AVSGFKGG-GA---PRWNPKPGAP 841
P S P P P P PG R A +GG GA P P PGAP
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +2
Query: 719 PVESPPGGYPNPGPFWPGSR*AVSGFKGG-GA---PRWNPKPGAP 841
P S P P P P PG R A +GG GA P P PGAP
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 716 PPVESPPGGYPNPGPFWPGSR*AVSGFKGGGAPRWNPKPGAPWNFYP 856
PP + P G P P P PG G G+P + +PGAP N P
Sbjct: 110 PPCQPCPQGPPGP-PGPPGPSGDAGGNGNPGSPGQDGQPGAPGNKGP 155
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNG----PGLGYPPGG 730
G PG Q GAP P P PG +G PG PGG
Sbjct: 201 GQPGHDGQPGAPGPKGPNGNPGQPGADGNPGAPGQSGTPGG 241
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 716 PPVESPPGGYPNPGPFWPGSR*AVSGFKGGGAPRWNPKPGAPWNFYP 856
PP + P G P P P PG G G+P + +PGAP N P
Sbjct: 143 PPCQPCPQGPPGP-PGPPGPSGDAGGNGNPGSPGQDGQPGAPGNKGP 188
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNG----PGLGYPPGG 730
G PG Q GAP P P PG +G PG PGG
Sbjct: 234 GQPGHDGQPGAPGPKGPNGNPGQPGADGNPGAPGQSGTPGG 274
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 30.3 bits (65), Expect = 2.0
Identities = 26/59 (44%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQN----GPGLGYP--PGGDSTGGPTHRVKGAPWH 682
GAPG GAP P P A PGQ+ GPG P P GD+ G P GAP H
Sbjct: 134 GAPGPAGAPGAPGPQGPSGA---PGQDAVGEGPGPAGPQGPAGDA-GAPGQ--AGAPGH 186
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 8/51 (15%)
Frame = -2
Query: 840 GAPGFGFQR--------GAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGGP 712
GAPG G QR GAP P P PGQ+G G G P + G P
Sbjct: 188 GAPGQGGQRSRGTPGPAGAPGPQGPAGGPGQPGQSG-GAGAPGPAGAPGAP 237
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 30.3 bits (65), Expect = 2.0
Identities = 26/59 (44%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQN----GPGLGYP--PGGDSTGGPTHRVKGAPWH 682
GAPG GAP P P A PGQ+ GPG P P GD+ G P GAP H
Sbjct: 134 GAPGPAGAPGAPGPQGPSGA---PGQDAVGGGPGPAGPQGPAGDA-GAPGQ--AGAPGH 186
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 8/51 (15%)
Frame = -2
Query: 840 GAPGFGFQR--------GAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGGP 712
GAPG G QR GAP P P PGQ+G G G P + G P
Sbjct: 188 GAPGQGGQRSRGTPGPSGAPGPQGPAGGPGQPGQSG-GAGAPGPAGAPGAP 237
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +2
Query: 719 PVESPPGGYPNPGPFWPGSR*AVSGFKGG-GA---PRWNPKPGAP 841
P S P P P P PG R A +GG GA P P PGAP
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +2
Query: 719 PVESPPGGYPNPGPFWPGSR*AVSGFKGG-GA---PRWNPKPGAP 841
P S P P P P PG R A +GG GA P P PGAP
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/52 (42%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = -2
Query: 834 PGFGFQRGAPPPLNP--ETAYRLPGQNG-PGLGYPPGGDSTGGPTHRVKGAP 688
PG G P P P E AY P G PG PPG D GP GAP
Sbjct: 235 PGPPGPAGPPGPAGPAGEDAYAQPSPAGTPGPPGPPGKDGEAGPDGPA-GAP 285
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGGPTH 706
G PG G P P P PG G G+P + GGP H
Sbjct: 235 GGPGNNGSAGTPGPAGPAGNPGTPGNKGSD-GHPGTPGAPGGPGH 278
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 807 PPPLNPETAYRLPGQNGPGLGYPP 736
PPP+ P A +P +N P LG PP
Sbjct: 965 PPPVPPREAPPIPKRNPPPLGAPP 988
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNG----PGLGYPPGGDST 721
GAPG G GAP P+ A PGQ G PG PG S+
Sbjct: 179 GAPGVGGGSGAPGAPGPKGAPGGPGQPGRDGQPGQAGQPGSSSS 222
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 807 PPPLNPETAYRLPGQNGPGLGYPP 736
PPP+ P A +P +N P LG PP
Sbjct: 965 PPPVPPREAPPIPKRNPPPLGAPP 988
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 807 PPPLNPETAYRLPGQNGPGLGYPP 736
PPP+ P A +P +N P LG PP
Sbjct: 965 PPPVPPREAPPIPKRNPPPLGAPP 988
>U12966-6|AAM48533.1| 783|Caenorhabditis elegans Hypothetical
protein F54D8.6 protein.
Length = 783
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = -2
Query: 834 PGFGFQRGA--PPPLNPETAYRLPGQNGPGLGYPPGGDSTGGPTHR 703
PG G G PP R PG PG+ PPGGD G R
Sbjct: 585 PGGGGIPGVDRPPGGGRRGVDRPPGSGMPGIDRPPGGDRMGDKQRR 630
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 777 RLPGQNGPGLGYPPGGDSTG 718
R PG+ G+ PPGGDS G
Sbjct: 561 RAPGRGSRGIDRPPGGDSRG 580
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGG 715
G PG G P P+ P PG + PG PPG G
Sbjct: 253 GTPGPAGPPGPPGPIGPPGQPGAPGSSQPGPQGPPGDPGIDG 294
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNG-PGLGYPPG 733
G PG + GAP P P PGQ G PG PPG
Sbjct: 161 GNPGRNGEDGAPGPQGPSGPPGPPGQPGQPGQRGPPG 197
>Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical
protein F08G5.4 protein.
Length = 299
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/52 (40%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNG-PGLGYPPGGDSTGGPTHRVKGAP 688
G G Q GAP P PE PG G PG PG D G + GAP
Sbjct: 163 GQDGPAGQPGAPGPAGPEGDAGAPGDAGAPGAPGAPGQDGQRGT--GLPGAP 212
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGGP 712
G PG Q G P + A G+ GPG PPG GP
Sbjct: 207 GPPGNDGQPGQPGGPGQDGASSAGGEAGPGPAGPPGPAGPAGP 249
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Frame = -2
Query: 846 FQGAPGFGFQRGAPPPLNPETAYRLPGQNG----PGLGYPPGGDSTGG 715
F G PG G P+ P A PG+ G PGL PG D G
Sbjct: 627 FPGQPGVDGLPGPSGPVGPPGAPGYPGEKGDAGLPGLSGKPGQDGLPG 674
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Frame = -2
Query: 846 FQGAPGFGFQRGAPPPLNPETAYRLPGQNG----PGLGYPPGGDSTGG 715
F G PG G P+ P A PG+ G PGL PG D G
Sbjct: 626 FPGQPGVDGLPGPSGPVGPPGAPGYPGEKGDAGLPGLSGKPGQDGLPG 673
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Frame = -2
Query: 846 FQGAPGFGFQRGAPPPLNPETAYRLPGQNG----PGLGYPPGGDSTGG 715
F G PG G P+ P A PG+ G PGL PG D G
Sbjct: 626 FPGQPGVDGLPGPSGPVGPPGAPGYPGEKGDAGLPGLSGKPGQDGLPG 673
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Frame = -2
Query: 846 FQGAPGFGFQRGAPPPLNPETAYRLPGQNG----PGLGYPPGGDSTGG 715
F G PG G P+ P A PG+ G PGL PG D G
Sbjct: 627 FPGQPGVDGLPGPSGPVGPPGAPGYPGEKGDAGLPGLSGKPGQDGLPG 674
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Frame = -2
Query: 846 FQGAPGFGFQRGAPPPLNPETAYRLPGQNG----PGLGYPPGGDSTGG 715
F G PG G P+ P A PG+ G PGL PG D G
Sbjct: 663 FPGQPGVDGLPGPSGPVGPPGAPGYPGEKGDAGLPGLSGKPGQDGLPG 710
>U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform b
protein.
Length = 265
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPG--GDSTGGPTHRVKGAP 688
GAPG GA P+ P PG +G PPG GDS G P H + P
Sbjct: 189 GAPG---PMGAIGPIGPPGPKGNPGPDGQSYQGPPGPPGDS-GTPGHEGRAGP 237
>U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform a
protein.
Length = 329
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = -2
Query: 834 PGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPG--GDSTGGPTHRVKGAP 688
PG G P P+ P PG +G PPG GDS G P H + P
Sbjct: 252 PGPQGAPGKPGPIGPPGPKGNPGPDGQSYQGPPGPPGDS-GTPGHEGRAGP 301
>U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protein
36 protein.
Length = 307
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Frame = +2
Query: 710 VGPPVESPPGGYPNPGP----FWPGSR*AVSGFKGGGAPRWNPKPGAP 841
+GPP PPGG PGP PG V+G G PR P P
Sbjct: 202 IGPP--GPPGGVGEPGPPGPAGQPGRVIQVNGAAGPAGPRGVKGPPGP 247
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = -2
Query: 834 PGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPG--GDSTGGPTHRVKGAP 688
PG G P P+ P PG +G PPG GDS G P H + P
Sbjct: 252 PGPQGAPGKPGPIGPPGPKGNPGPDGQSYQGPPGPPGDS-GTPGHEGRAGP 301
>L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen
protein.
Length = 307
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Frame = +2
Query: 710 VGPPVESPPGGYPNPGP----FWPGSR*AVSGFKGGGAPRWNPKPGAP 841
+GPP PPGG PGP PG V+G G PR P P
Sbjct: 202 IGPP--GPPGGVGEPGPPGPAGQPGRVIQVNGAAGPAGPRGVKGPPGP 247
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDST-GGPTHRVKGAPWHFI 676
G G G G P P L G PG PGG T GG H G ++ I
Sbjct: 108 GPGGLGTPGGPGTPGGPGNPGGLGGPGNPGGPGTPGGPGTPGGQPHGTAGGTYYVI 163
>Z81050-3|CAB02849.1| 291|Caenorhabditis elegans Hypothetical
protein C50B6.4 protein.
Length = 291
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYP-PGGDSTGGPTHRVKGAP 688
G PG + GAP P P+ PGQ+G G G P P G + GAP
Sbjct: 136 GEPGPAGEAGAPGPAGPDGQ---PGQDGQG-GQPGPAGPAGPAGDAGAPGAP 183
>Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical
protein C12D8.8 protein.
Length = 295
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNG-PGLGYPPGGDSTGG 715
GAPG +G P P P PGQNG G PG D G
Sbjct: 217 GAPGAPGAQGKPGPSGPPGIDGYPGQNGWKGQQGVPGQDDFPG 259
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/43 (41%), Positives = 19/43 (44%)
Frame = +2
Query: 713 GPPVESPPGGYPNPGPFWPGSR*AVSGFKGGGAPRWNPKPGAP 841
GPP PPGG+ PGP G G PR P PG P
Sbjct: 159 GPP--GPPGGHGEPGP------------AGRGGPRGPPGPGGP 187
>U53155-1|AAC48268.1| 393|Caenorhabditis elegans Oocyte maturation
defective protein2 protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -1
Query: 841 RGPRFWVPTGCP-PPFKPGNRLPASWP 764
RGPR+ +P+ P + GNR P+SWP
Sbjct: 245 RGPRYELPSKKPLETEEAGNRPPSSWP 271
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +2
Query: 689 GAPFTRWVGPPVESPPGGYPNPGPFWPGSR*AVSGFKGGGA--PRWNPKPGAP 841
G P V P + P G +PGP P + SG G P +PKP P
Sbjct: 174 GPPSPGPVDPSEDPQPSGSSSPGPVDPSDEPSPSGPPSPGPVDPSEDPKPSEP 226
>AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical
protein Y2H9A.3 protein.
Length = 291
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYP-PGGDSTGGPTHRVKGAP 688
G PG + GAP P P+ PGQ+G G G P P G + GAP
Sbjct: 136 GEPGPAGEAGAPGPAGPDGQ---PGQDGQG-GQPGPAGPAGPAGDAGAPGAP 183
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/51 (39%), Positives = 21/51 (41%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGGPTHRVKGAP 688
GAP RG P P P PGQ PG PG GG R +G P
Sbjct: 158 GAPAQSGGRGPPGPRGPAGDAGSPGQ--PGHPGSPGNPGRGG--QRSRGTP 204
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -1
Query: 880 VKAPPPFLRVKIPRGPRFWVPTGCPPPFKPG 788
V PPP LR ++P G G PPP PG
Sbjct: 398 VSLPPPQLRQELPPGIPGLPQFGLPPPGVPG 428
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGGPTHRVKGAP 688
G PG Q GAP P A N PG P G GP AP
Sbjct: 154 GPPGPDGQPGAPGPNGQPGAAGTTSTNEPGSPGPAGPPGPAGPAGEDAAAP 204
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = -2
Query: 843 QGAPGFGFQRGAPPPLNPETAYRLPGQNG-PGLGYPPGGDSTGGPTHRVKGAP 688
Q AP GAP P P PG G PG PG GP GAP
Sbjct: 206 QDAPSEPITPGAPGPAGPAGPQGQPGAPGQPGHDGQPGAPGPKGPNGN-PGAP 257
>U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protein
10 protein.
Length = 294
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGGP 712
GAPG Q GAP A GQ G G PG GP
Sbjct: 186 GAPGDNGQDGAPGQDGQPGAPGQDGQRGSGAPGGPGAPGNAGP 228
>U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protein
144 protein.
Length = 306
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGGP 712
GAPG Q GAP A GQ G G PG GP
Sbjct: 198 GAPGDNGQDGAPGQDGQPGAPGQDGQRGSGAPGGPGAPGNAGP 240
>U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defective
protein 1, isoformc protein.
Length = 721
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = -1
Query: 868 PPFLRVKIPRGPRFWVPTGCPPPFKPGNRLPASWPEWAGVGVPTRGGLHRGPYPPGKRCT 689
PPF R + + +F + G P A + WAG P G++ GP+PPG+R T
Sbjct: 213 PPFSR--LTQQQQFRLSNGSPGRTVNDIFSAAEYRNWAGPYDPR--GMY-GPFPPGQRAT 267
>U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defective
protein 1, isoformb protein.
Length = 942
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = -1
Query: 868 PPFLRVKIPRGPRFWVPTGCPPPFKPGNRLPASWPEWAGVGVPTRGGLHRGPYPPGKRCT 689
PPF R + + +F + G P A + WAG P G++ GP+PPG+R T
Sbjct: 411 PPFSR--LTQQQQFRLSNGSPGRTVNDIFSAAEYRNWAGPYDPR--GMY-GPFPPGQRAT 465
>U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defective
protein 1, isoforma protein.
Length = 987
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = -1
Query: 868 PPFLRVKIPRGPRFWVPTGCPPPFKPGNRLPASWPEWAGVGVPTRGGLHRGPYPPGKRCT 689
PPF R + + +F + G P A + WAG P G++ GP+PPG+R T
Sbjct: 479 PPFSR--LTQQQQFRLSNGSPGRTVNDIFSAAEYRNWAGPYDPR--GMY-GPFPPGQRAT 533
>AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity
specification proteinSYD-1 protein.
Length = 942
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = -1
Query: 868 PPFLRVKIPRGPRFWVPTGCPPPFKPGNRLPASWPEWAGVGVPTRGGLHRGPYPPGKRCT 689
PPF R + + +F + G P A + WAG P G++ GP+PPG+R T
Sbjct: 411 PPFSR--LTQQQQFRLSNGSPGRTVNDIFSAAEYRNWAGPYDPR--GMY-GPFPPGQRAT 465
>AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein.
Length = 139
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -2
Query: 771 PGQNGPGLGYPP-GGDSTGGPTHRVKGAPWHF 679
PG GPGLG P GG GGP V G P F
Sbjct: 48 PGIGGPGLGGPGIGGPGLGGP--GVGGGPGAF 77
>AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical
protein F46E10.2 protein.
Length = 139
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -2
Query: 771 PGQNGPGLGYPP-GGDSTGGPTHRVKGAPWHF 679
PG GPGLG P GG GGP V G P F
Sbjct: 48 PGIGGPGLGGPGIGGPGLGGP--GVGGGPGAF 77
>AF100656-8|AAF99965.1| 210|Caenorhabditis elegans Hypothetical
protein F49F1.9 protein.
Length = 210
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -2
Query: 807 PPPLNPETAYRLPGQNGPGLGYP-PGGDSTGGPTHRVKGAP 688
P P E L G GPG+ YP PGG G R G P
Sbjct: 63 PTPKPVENMETLHGPFGPGVRYPIPGGYWATGKVLRFYGVP 103
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGGPTHRVKGAPWHFI 676
GAPG GAP LPG GP P G GAP H +
Sbjct: 180 GAPGQKGPSGAPGQPGRSGGASLPGPPGPAGPPGPSGQPGSNGNAGAPGAPGHVV 234
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/51 (39%), Positives = 21/51 (41%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGGPTHRVKGAP 688
GAP RG P P P PGQ PG PG GG R +G P
Sbjct: 158 GAPAQSGGRGPPGPRGPAGDAGSPGQ--PGHPGSPGNPGRGG--QRSRGLP 204
>Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -2
Query: 825 GFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGGPTHRVKGAP 688
G QRGAPPP P+ L G + PG + V G P
Sbjct: 515 GRQRGAPPPPPPQPMPMLIGYDMPGAPMMQATEVLTADGQMVNGTP 560
>Z81567-3|CAB04587.1| 301|Caenorhabditis elegans Hypothetical
protein K08C9.4 protein.
Length = 301
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -2
Query: 816 RGAPPPLNPETAYRLPGQNG-PGLGYPPGGDSTGGPTHRVKGAP 688
+GAP P PE GQ+G PG PG T G + GAP
Sbjct: 204 QGAPGPQGPEGPAGAAGQDGAPGEDGAPGAQGTEG----IAGAP 243
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 28.3 bits (60), Expect = 7.9
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNG----PGLGYPPGG 730
G PG Q GAP P P PG +G PG PGG
Sbjct: 234 GQPGHDGQPGAPGPKGPNGNPGQPGADGNPGAPGQSGTPGG 274
>Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -2
Query: 825 GFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGGPTHRVKGAP 688
G QRGAPPP P+ L G + PG + V G P
Sbjct: 515 GRQRGAPPPPPPQPMPMLIGYDMPGAPMMQATEVLTADGQMVNGTP 560
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = -2
Query: 843 QGAPGFGFQRGAPPPLNPETAYRLPGQNG-PGLGYPPGGDSTGGPTHRVKGAP 688
Q AP GAP P P PG G PG PG GP GAP
Sbjct: 206 QDAPSEPITPGAPGPAGPAGPQGPPGAPGQPGHDGQPGAPGPKGPNGN-PGAP 257
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = -2
Query: 843 QGAPGFGFQRGAPPPLNPETAYRLPGQNG-PGLGYPPGGDSTGGPTHRVKGAP 688
Q AP GAP P P PG G PG PG GP GAP
Sbjct: 206 QDAPSEPITPGAPGPAGPAGPQGPPGAPGQPGHDGQPGAPGPKGPNGN-PGAP 257
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -2
Query: 855 G*KFQGAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGGPTHRVK 697
G ++Q PG+ G PP P + PG P GYPP G G P ++
Sbjct: 99 GAEYQMPPGY--PAGYPPYGMPPRHH--PGYPHPAYGYPPPGAPYGYPPQMMR 147
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 713 GPPVESPPGGYPNPGPFWPGSR*AVSGFKGGGAP--RWNPKPGAPWNFYP 856
GPP P +P P P +PG G G P + P PGAP+ + P
Sbjct: 716 GPPGPPGPQQHPGPYPGYPG-----YGPPGAMRPPAGFAPPPGAPYGYPP 760
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 28.3 bits (60), Expect = 7.9
Identities = 22/56 (39%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNG-PGLGYPPGGDST----GGPTHRVKGAP 688
GAPG + G P P +PG G PG PPG T GP R GAP
Sbjct: 222 GAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGEPGTYKTEVGPAGRA-GAP 276
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Frame = -2
Query: 810 APPPLNPETAYRLPGQNGPG-----LGYPPGGDSTGGPTHR 703
+PPP P + + PG GP G PPG GP HR
Sbjct: 59 SPPPA-PRPSGQPPGPQGPSDLPGPSGAPPGPPHPSGPPHR 98
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 28.3 bits (60), Expect = 7.9
Identities = 22/56 (39%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNG-PGLGYPPGGDST----GGPTHRVKGAP 688
GAPG + G P P +PG G PG PPG T GP R GAP
Sbjct: 203 GAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGEPGTYKTEVGPAGRA-GAP 257
>L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protein
91 protein.
Length = 278
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = -2
Query: 840 GAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGGPT-HRVKGAP 688
G PG Q GAP P PE G PG PG D G R G P
Sbjct: 155 GQPGADGQGGAPGPAGPEGPAGDAG--APGAPGAPGNDGQPGQNGQRSTGTP 204
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = -2
Query: 843 QGAPGFGFQRGAPPPLNPETAYRLPGQNG-PGLGYPPGGDSTGGPTHRVKGAP 688
Q AP GAP P P PG G PG PG GP GAP
Sbjct: 206 QDAPSEPITPGAPGPAGPAGPQGPPGAPGQPGHDGQPGAPGPKGPNGN-PGAP 257
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = -2
Query: 843 QGAPGFGFQRGAPPPLNPETAYRLPGQNG-PGLGYPPGGDSTGGPTHRVKGAP 688
Q AP GAP P P PG G PG PG GP GAP
Sbjct: 206 QDAPSEPITPGAPGPAGPAGPQGPPGAPGQPGHDGQPGAPGPKGPNGN-PGAP 257
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -2
Query: 846 FQGAPGFGFQRGAPPPLNPETAYRLPGQNGPGLGYPPGGDSTGGP 712
+ GA GFG A P + +Y G G G G GG + GP
Sbjct: 70 YGGAGGFGGAYQAAPAIGGGGSYAGAGPIGGGFGGAQGGYAGAGP 114
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,787,786
Number of Sequences: 27780
Number of extensions: 563296
Number of successful extensions: 2239
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 1357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2162
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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