Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30366
(901 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 25 1.2
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 23 5.0
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 23 5.0
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 23 5.0
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 23 5.0
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 23 5.0
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 23 5.0
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 23 5.0
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 5.0
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 5.0
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 5.0
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 5.0
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 5.0
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 5.0
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 5.0
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 5.0
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 5.0
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 6.6
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 6.6
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 6.6
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 22 6.6
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 24.6 bits (51), Expect = 1.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 686 QGAPFTRWVGPPVESPPGGYPNPGP 760
+G+P GPP PPG P+ P
Sbjct: 36 RGSPPNPSQGPPPGGPPGAPPSQNP 60
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 901 PLAFLPTVKAPPPFLRVKIPRGPRF 827
PL P PP R++ P PRF
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPPNPRF 148
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 901 PLAFLPTVKAPPPFLRVKIPRGPRF 827
PL P PP R++ P PRF
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPPNPRF 148
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 901 PLAFLPTVKAPPPFLRVKIPRGPRF 827
PL P PP R++ P PRF
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPPNPRF 148
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 901 PLAFLPTVKAPPPFLRVKIPRGPRF 827
PL P PP R++ P PRF
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPPNPRF 148
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 901 PLAFLPTVKAPPPFLRVKIPRGPRF 827
PL P PP R++ P PRF
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPPNPRF 148
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 901 PLAFLPTVKAPPPFLRVKIPRGPRF 827
PL P PP R++ P PRF
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPPNPRF 148
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 901 PLAFLPTVKAPPPFLRVKIPRGPRF 827
PL P PP R++ P PRF
Sbjct: 124 PLTPFPPRFIPPDMYRLRPPPNPRF 148
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 901 PLAFLPTVKAPPPFLRVKIPRGPRF 827
PL P PP R++ P PRF
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPPNPRF 397
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 901 PLAFLPTVKAPPPFLRVKIPRGPRF 827
PL P PP R++ P PRF
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPPNPRF 397
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 901 PLAFLPTVKAPPPFLRVKIPRGPRF 827
PL P PP R++ P PRF
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPPNPRF 397
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 901 PLAFLPTVKAPPPFLRVKIPRGPRF 827
PL P PP R++ P PRF
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPPNPRF 397
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 901 PLAFLPTVKAPPPFLRVKIPRGPRF 827
PL P PP R++ P PRF
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPPNPRF 397
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 901 PLAFLPTVKAPPPFLRVKIPRGPRF 827
PL P PP R++ P PRF
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPPNPRF 397
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 901 PLAFLPTVKAPPPFLRVKIPRGPRF 827
PL P PP R++ P PRF
Sbjct: 372 PLTPFPPRFIPPDMYRLRPPPNPRF 396
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 901 PLAFLPTVKAPPPFLRVKIPRGPRF 827
PL P PP R++ P PRF
Sbjct: 357 PLTPFPPRFIPPDMYRLRPPPNPRF 381
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 901 PLAFLPTVKAPPPFLRVKIPRGPRF 827
PL P PP R++ P PRF
Sbjct: 373 PLTPFPPRFIPPDMYRLRPPPNPRF 397
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.2 bits (45), Expect = 6.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 700 KRCTLAFYLSSHAISKNSPLKPEVLMSNM 614
KR LSS +SK SP++ L NM
Sbjct: 244 KRTRAEGRLSSDNMSKKSPVRKATLFLNM 272
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 6.6
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 807 GHPVGTQNLGPLGIFTLKKGGGAFTV 884
G +G NL K GGGAF V
Sbjct: 34 GLAIGLGNLWRFPYLCYKNGGGAFMV 59
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 6.6
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 807 GHPVGTQNLGPLGIFTLKKGGGAFTV 884
G +G NL K GGGAF V
Sbjct: 87 GLAIGLGNLWRFPYLCYKNGGGAFMV 112
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +3
Query: 807 GHPVGTQNLGPLGIFTLKKGGG 872
G P LGP I T++ GG
Sbjct: 30 GRPAANTKLGPQRIHTVRTRGG 51
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 264,428
Number of Sequences: 438
Number of extensions: 7628
Number of successful extensions: 63
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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