Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30364
         (811 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051746-1|AAK93170.1|  715|Drosophila melanogaster LD27216p pro...    58   1e-08
AE014134-61|AAF51531.1|  715|Drosophila melanogaster CG11490-PA ...    58   1e-08
X58374-1|CAA41263.1|  702|Drosophila melanogaster crn protein.         30   4.3  
AY051666-1|AAK93090.1|  702|Drosophila melanogaster LD21701p pro...    30   4.3  
AL009195-5|CAA15705.1|  702|Drosophila melanogaster EG:30B8.1,FB...    30   4.3  
AE014298-369|AAF45760.1|  702|Drosophila melanogaster CG3193-PA ...    30   4.3  

>AY051746-1|AAK93170.1|  715|Drosophila melanogaster LD27216p
           protein.
          Length = 715

 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 8/79 (10%)
 Frame = +2

Query: 23  LFTQDGVLLKTSVGRPVSDFNSIGMLCIVQNADGTK-------CIEWRPNDLITIDSDTQ 181
           LFT DGVLLK +    ++D N+ G L +V+ +            +EW+PND I I  D+Q
Sbjct: 42  LFTHDGVLLKKASAEHIADLNTSGSLSLVEYSRSIAEMPRRRLLLEWQPNDSIMIADDSQ 101

Query: 182 DQ-EWAVVNTVGRRQRTLS 235
           DQ +WA+V+ +  R RT S
Sbjct: 102 DQGDWALVDRISGRTRTTS 120



 Score = 45.6 bits (103), Expect = 8e-05
 Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
 Frame = +1

Query: 250 GFANLRARIIKIPLDDLKTFRITRNNQQMQFSTKP--GVWQNTFYFQHGNAEIFVAYLKN 423
           G A  R+R+++  L+DL +  +    Q ++F  K   GV  + F+FQHGNA++FV  +++
Sbjct: 134 GGATTRSRVMRAQLEDLSSVEVRHRGQTIRFMRKGANGV-HSEFFFQHGNADLFVRSMRD 192

Query: 424 -HL-KTAKT-RHDRNTYMVVEPNDESQVLNK 507
            HL + A+T R     Y ++    E+Q L K
Sbjct: 193 QHLIENAETSRSGGEVYAIL--TTENQKLKK 221


>AE014134-61|AAF51531.1|  715|Drosophila melanogaster CG11490-PA
           protein.
          Length = 715

 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 8/79 (10%)
 Frame = +2

Query: 23  LFTQDGVLLKTSVGRPVSDFNSIGMLCIVQNADGTK-------CIEWRPNDLITIDSDTQ 181
           LFT DGVLLK +    ++D N+ G L +V+ +            +EW+PND I I  D+Q
Sbjct: 42  LFTHDGVLLKKASAEHIADLNTSGSLSLVEYSRSIAEMPRRRLLLEWQPNDSIMIADDSQ 101

Query: 182 DQ-EWAVVNTVGRRQRTLS 235
           DQ +WA+V+ +  R RT S
Sbjct: 102 DQGDWALVDRISGRTRTTS 120



 Score = 45.6 bits (103), Expect = 8e-05
 Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
 Frame = +1

Query: 250 GFANLRARIIKIPLDDLKTFRITRNNQQMQFSTKP--GVWQNTFYFQHGNAEIFVAYLKN 423
           G A  R+R+++  L+DL +  +    Q ++F  K   GV  + F+FQHGNA++FV  +++
Sbjct: 134 GGATTRSRVMRAQLEDLSSVEVRHRGQTIRFMRKGANGV-HSEFFFQHGNADLFVRSMRD 192

Query: 424 -HL-KTAKT-RHDRNTYMVVEPNDESQVLNK 507
            HL + A+T R     Y ++    E+Q L K
Sbjct: 193 QHLIENAETSRSGGEVYAIL--TTENQKLKK 221


>X58374-1|CAA41263.1|  702|Drosophila melanogaster crn protein.
          Length = 702

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 10/46 (21%), Positives = 21/46 (45%)
 Frame = +1

Query: 328 QQMQFSTKPGVWQNTFYFQHGNAEIFVAYLKNHLKTAKTRHDRNTY 465
           QQ +      +W+     +H N  +++ Y +  +K  +  H RN +
Sbjct: 88  QQQEIQPARSIWERALDNEHRNVTLWLKYAEMEMKNKQVNHARNLW 133


>AY051666-1|AAK93090.1|  702|Drosophila melanogaster LD21701p
           protein.
          Length = 702

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 10/46 (21%), Positives = 21/46 (45%)
 Frame = +1

Query: 328 QQMQFSTKPGVWQNTFYFQHGNAEIFVAYLKNHLKTAKTRHDRNTY 465
           QQ +      +W+     +H N  +++ Y +  +K  +  H RN +
Sbjct: 88  QQQEIQRARSIWERALDNEHRNVTLWLKYAEMEMKNKQVNHARNLW 133


>AL009195-5|CAA15705.1|  702|Drosophila melanogaster
           EG:30B8.1,FBgn0000377;crn protein.
          Length = 702

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 10/46 (21%), Positives = 21/46 (45%)
 Frame = +1

Query: 328 QQMQFSTKPGVWQNTFYFQHGNAEIFVAYLKNHLKTAKTRHDRNTY 465
           QQ +      +W+     +H N  +++ Y +  +K  +  H RN +
Sbjct: 88  QQQEIQRARSIWERALDNEHRNVTLWLKYAEMEMKNKQVNHARNLW 133


>AE014298-369|AAF45760.1|  702|Drosophila melanogaster CG3193-PA
           protein.
          Length = 702

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 10/46 (21%), Positives = 21/46 (45%)
 Frame = +1

Query: 328 QQMQFSTKPGVWQNTFYFQHGNAEIFVAYLKNHLKTAKTRHDRNTY 465
           QQ +      +W+     +H N  +++ Y +  +K  +  H RN +
Sbjct: 88  QQQEIQRARSIWERALDNEHRNVTLWLKYAEMEMKNKQVNHARNLW 133


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,687,475
Number of Sequences: 53049
Number of extensions: 843751
Number of successful extensions: 2239
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2237
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3798466620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)