Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30364
         (811 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    25   1.1  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    25   1.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   1.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   3.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   3.3  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   5.8  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 794 GEENVGLTAEGPGNSLVPG*PRSVPSRALMLLS 696
           G+E  GLT+E     LV G    V S  L+LL+
Sbjct: 117 GDEENGLTSESTDPGLVAGIVIGVTSLGLLLLA 149


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 794 GEENVGLTAEGPGNSLVPG*PRSVPSRALMLLS 696
           G+E  GLT+E     LV G    V S  L+LL+
Sbjct: 88  GDEENGLTSESTDPGLVAGIVIGVTSLGLLLLA 120


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 356 ESGRIRSISNMETPRYSWP 412
           +SG I +++  E PR  WP
Sbjct: 564 DSGSINTVAEWEPPRALWP 582


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 525 YLIRQTFIQDLGLVVRFDHH 466
           YL+  +FI   G  V+FD H
Sbjct: 374 YLLNVSFIDAAGSEVKFDEH 393


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 525 YLIRQTFIQDLGLVVRFDHH 466
           YL+  +FI   G  V+FD H
Sbjct: 464 YLLNVSFIDAAGSEVKFDEH 483


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 2   LHDQYKDLFTQDGVLLK 52
           +HD YKDL  + G L K
Sbjct: 79  IHDAYKDLNQRYGALCK 95


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,963
Number of Sequences: 438
Number of extensions: 5521
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)