Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30364
         (811 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g52580.1 68418.m06529 hypothetical protein                          30   1.6  
At2g14130.1 68415.m01574 Ulp1 protease family protein contains P...    28   6.4  
At5g17530.2 68418.m02057 phosphoglucosamine mutase family protei...    28   8.4  
At5g17530.1 68418.m02056 phosphoglucosamine mutase family protei...    28   8.4  
At3g26230.1 68416.m03272 cytochrome P450 family protein contains...    28   8.4  

>At5g52580.1 68418.m06529 hypothetical protein 
          Length = 327

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +1

Query: 376 YFQHGNAEIFVAYLKNHLKTAKTRHDRNTYMVVEPNDESQVLNKCL 513
           YF +G    F+A +K H+  A++  D+N ++V   ND    L + L
Sbjct: 111 YFYNGGVREFLAMVKQHVFLARSSEDQNVFIV---NDFQSPLQRTL 153


>At2g14130.1 68415.m01574 Ulp1 protease family protein contains Pfam
           profile PF02902: Ulp1 protease family, C-terminal
           catalytic domain; similar to At1g32840, At4g04010,
           At2g06430, At2g15140, At2g04980, At3g44500, At2g15190,
           At3g47260, At5g34900, At3g29210, At2g02210, At3g32900
          Length = 808

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +3

Query: 636 YGNEDVNGKRDVSEEVADLLT*KHERSRGHGPRS--PRNQRVTR 761
           Y  +D N +RDV +EVA+    +  + + H PRS  P   R+ R
Sbjct: 454 YPGDDENTQRDVGDEVAE----ESSKDKSHTPRSSTPNFNRIRR 493


>At5g17530.2 68418.m02057 phosphoglucosamine mutase family protein
           low similarity to phosphoglucomutase/phosphomannomutase
           [Sphingomonas paucimobilis] GI:6103619; contains
           InterPro accession IPR006352: Phosphoglucosamine mutase
          Length = 581

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 727 PCPRERSCF*VNKSATSSETSRFPFTSS 644
           PCPRE+  F +N S  +   S++ F  S
Sbjct: 6   PCPREKMAFNLNSSMRAHTLSKYQFVLS 33


>At5g17530.1 68418.m02056 phosphoglucosamine mutase family protein
           low similarity to phosphoglucomutase/phosphomannomutase
           [Sphingomonas paucimobilis] GI:6103619; contains
           InterPro accession IPR006352: Phosphoglucosamine mutase
          Length = 581

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 727 PCPRERSCF*VNKSATSSETSRFPFTSS 644
           PCPRE+  F +N S  +   S++ F  S
Sbjct: 6   PCPREKMAFNLNSSMRAHTLSKYQFVLS 33


>At3g26230.1 68416.m03272 cytochrome P450 family protein contains
           Pfam profile: PF00067 cytochrome P450
          Length = 498

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/56 (26%), Positives = 24/56 (42%)
 Frame = +3

Query: 537 NTTDVVWNLVSNFKQRPYETTLEAFSKLTDIVYYGNEDVNGKRDVSEEVADLLT*K 704
           N T  +W    +    PY  +L    KL+ + ++    V   R + EE  DL+  K
Sbjct: 97  NVTSKLWRDGQDIGLAPYGESLRELRKLSFLKFFSTTKVRSFRYIREEENDLMVKK 152


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,562,132
Number of Sequences: 28952
Number of extensions: 400450
Number of successful extensions: 975
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1843581600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)