Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30361
         (839 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   2.3  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   4.0  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   4.0  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   5.3  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    22   7.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   7.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   7.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   7.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   7.0  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   9.2  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1

Query: 233 TPEGSHHTQTTLRGHSIVHVCHRKFSKELQVQ 138
           T  G H  +  +R      VCH+KF+  L +Q
Sbjct: 180 THMGVHRAKPPMRVLHQCPVCHKKFTNALVLQ 211


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 242 LFLGAMWTVASSPWKQYACSS 304
           L L A W+V +  W   +CSS
Sbjct: 397 LLLDADWSVNAGMWMWLSCSS 417


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 565 PTRACSATCSGPTPTRT 615
           PT  CS   S PTP+ +
Sbjct: 192 PTPTCSEASSSPTPSHS 208


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 240 ISSLELCGPWQAVLGNNMP 296
           + + +L G W++V G N P
Sbjct: 208 VMAYDLHGSWESVTGQNAP 226


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 480 LVNYRRNGKTVEAVCERL 427
           LV+Y +  KT+ A C R+
Sbjct: 174 LVDYMKKNKTLGAACGRI 191


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 480 LVNYRRNGKTVEAVCERL 427
           LV+Y +  KT+ A C R+
Sbjct: 488 LVDYMKKNKTLGAACGRI 505


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 480 LVNYRRNGKTVEAVCERL 427
           LV+Y +  KT+ A C R+
Sbjct: 721 LVDYMKKNKTLGAACGRI 738


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 480 LVNYRRNGKTVEAVCERL 427
           LV+Y +  KT+ A C R+
Sbjct: 721 LVDYMKKNKTLGAACGRI 738


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 358 CASINRIYGF 387
           C S+NRI+GF
Sbjct: 527 CDSVNRIFGF 536


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 738 PWLPAKYSSSNSWFGQETLPHRLR 667
           PW+  K ++  S   +  LP RLR
Sbjct: 116 PWMKEKKTTRKSSQQENGLPRRLR 139


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,083
Number of Sequences: 336
Number of extensions: 5001
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)