Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30360
(824 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein. 36 0.13
M57417-1|AAA63229.2| 294|Homo sapiens mucin protein. 36 0.18
M22404-1|AAA36333.1| 167|Homo sapiens protein ( Human intestina... 36 0.18
AL355338-1|CAH70366.2| 663|Homo sapiens Zic family member 5 (od... 36 0.24
AF378304-1|AAK55418.1| 639|Homo sapiens zinc family member 5 pr... 36 0.24
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 33 0.95
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 33 0.95
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 33 0.95
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 33 0.95
L46721-1|AAC41774.1| 164|Homo sapiens mucin protein. 33 1.3
BC051193-1|AAH51193.1| 733|Homo sapiens NFXL1 protein protein. 33 1.7
AK131285-1|BAD18459.1| 736|Homo sapiens protein ( Homo sapiens ... 33 1.7
AC107068-2|AAY40918.1| 733|Homo sapiens unknown protein. 33 1.7
Z34277-1|CAA84031.1| 477|Homo sapiens mucin protein. 31 5.1
BT009908-1|AAP88910.1| 330|Homo sapiens homeo box C13 protein. 30 8.8
BC090850-1|AAH90850.1| 330|Homo sapiens homeobox C13 protein. 30 8.8
BC002754-1|AAH02754.1| 330|Homo sapiens HOXC13 protein protein. 30 8.8
AK024027-1|BAB14786.1| 146|Homo sapiens protein ( Homo sapiens ... 30 8.8
AJ438986-1|CAD27941.1| 330|Homo sapiens hypothetical protein pr... 30 8.8
AF263466-1|AAF73439.1| 330|Homo sapiens HOXC13 protein. 30 8.8
AF255676-1|AAF67760.1| 330|Homo sapiens homeoprotein C13 protein. 30 8.8
>AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.
Length = 2448
Score = 36.3 bits (80), Expect = 0.13
Identities = 27/76 (35%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +3
Query: 204 TPHPLTRTTQGIPTGTLVFPKYRPSRYPS*ANSP*ATTRTASLLCTGTPSR-TYSP*SCD 380
T P TRTT P GT P PS P+ + TT S T T S T S S
Sbjct: 2349 TSAPTTRTTSASPAGTTSGPGNTPSPVPTTSTISAPTTSITSAPTTSTTSAPTSSTTSGP 2408
Query: 381 RCSNTPRPSSSCTGTP 428
+ +P P++S T P
Sbjct: 2409 GTTPSPVPTTSITSAP 2424
>M57417-1|AAA63229.2| 294|Homo sapiens mucin protein.
Length = 294
Score = 35.9 bits (79), Expect = 0.18
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +3
Query: 201 PTPHPLTRTTQGIPTGTLVFPKYRPSRYPS*ANSP*ATTRTASLLCTGTPSRTYSP*SCD 380
PTP P+T TT PT T P+ + +P +TT T + T T ++T +P
Sbjct: 71 PTPTPITTTTTVTPTPT-------PTGTQTPTTTPISTTTTVTPTPTPTGTQTLTPTPIT 123
Query: 381 RCSN-TPRPSSSCTGTPYST 437
+ TP P+ + T TP ST
Sbjct: 124 TTTTVTPTPTPTGTQTPTST 143
Score = 34.7 bits (76), Expect = 0.41
Identities = 27/79 (34%), Positives = 36/79 (45%)
Frame = +3
Query: 201 PTPHPLTRTTQGIPTGTLVFPKYRPSRYPS*ANSP*ATTRTASLLCTGTPSRTYSP*SCD 380
PTP P+T TT PT T P S P+ + T T + TGT + T +P +
Sbjct: 186 PTPTPITTTTTVTPTPT---PTSTQSTTPTPITT--TNTVTPTPTPTGTQTPTPTPITTT 240
Query: 381 RCSNTPRPSSSCTGTPYST 437
TP P+ + T TP T
Sbjct: 241 TTMVTPTPTITSTQTPTPT 259
>M22404-1|AAA36333.1| 167|Homo sapiens protein ( Human intestinal
mucin mRNA, partial cds, clone SMUC 40. ).
Length = 167
Score = 35.9 bits (79), Expect = 0.18
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +3
Query: 201 PTPHPLTRTTQGIPTGTLVFPKYRPSRYPS*ANSP*ATTRTASLLCTGTPSRTYSP*SCD 380
PTP P+T TT PT T P+ + +P TT T + T TP+ T +P S
Sbjct: 95 PTPTPITTTTTVTPTPT-------PTGTQTPTPTPITTTTTVTP--TPTPTGTQTPTSTP 145
Query: 381 RCSNTP-RPSSSCTGTPYST 437
+NT P+ + TGTP +T
Sbjct: 146 ITTNTTVTPTPTPTGTPSTT 165
>AL355338-1|CAH70366.2| 663|Homo sapiens Zic family member 5
(odd-paired homolog, Drosophila) protein.
Length = 663
Score = 35.5 bits (78), Expect = 0.24
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +3
Query: 174 LRLSMKLMKPTPHPLTRTTQGIPTGTLVFPKYRPSRYPS*ANSP*ATTRTASLLC--TGT 347
+++ K P+P PL ++ G P G + P P+R S SP T +C +G
Sbjct: 572 MKIHCKSPPPSPGPLGYSSVGTPVGAPLSPVLDPARSHSSTLSPQVTNLNEWYVCQASGA 631
Query: 348 PSRTYSP*SCDRCSNT 395
PS ++P S S T
Sbjct: 632 PSHLHTPSSNGTTSET 647
>AF378304-1|AAK55418.1| 639|Homo sapiens zinc family member 5
protein protein.
Length = 639
Score = 35.5 bits (78), Expect = 0.24
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +3
Query: 174 LRLSMKLMKPTPHPLTRTTQGIPTGTLVFPKYRPSRYPS*ANSP*ATTRTASLLC--TGT 347
+++ K P+P PL ++ G P G + P P+R S SP T +C +G
Sbjct: 548 MKIHCKSPPPSPGPLGYSSVGTPVGAPLSPVLDPARSHSSTLSPQVTNLNEWYVCQASGA 607
Query: 348 PSRTYSP*SCDRCSNT 395
PS ++P S S T
Sbjct: 608 PSHLHTPSSNGTTSET 623
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 33.5 bits (73), Expect = 0.95
Identities = 29/78 (37%), Positives = 35/78 (44%)
Frame = +3
Query: 204 TPHPLTRTTQGIPTGTLVFPKYRPSRYPS*ANSP*ATTRTASLLCTGTPSRTYSP*SCDR 383
TP P T TT P T P P+ PS SP TT + TPS T +P S
Sbjct: 1031 TPSPPTTTTPSPPITTTTTPP--PTTTPS---SPITTTPSPPTTTMTTPSPTTTPSS--P 1083
Query: 384 CSNTPRPSSSCTGTPYST 437
+ T PSS+ T +P T
Sbjct: 1084 ITTTTTPSSTTTPSPPPT 1101
Score = 33.1 bits (72), Expect = 1.3
Identities = 28/79 (35%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +3
Query: 204 TPHPLTRTTQGIPTGTLVFPKYR-PSRYPS*ANSP*ATTRTASLLCTGTPSRTYSP*SCD 380
TP P T T PT T P PS P+ +P TT T S T TPS +
Sbjct: 913 TPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTT-TPSPPTTTTPSPPTITTTTP 971
Query: 381 RCSNTPRPSSSCTGTPYST 437
+ TP P ++ T TP T
Sbjct: 972 PPTTTPSPPTTTTTTPPPT 990
Score = 30.3 bits (65), Expect = 8.8
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 201 PTPHPLTRTTQGIPTGTLVFP-KYRPSRYPS*ANSP*ATTRTAS-LLCTGTPSRTYSP*S 374
P+P P+T TT PT T P PS + +P TT +S + T TPS T +P
Sbjct: 1040 PSP-PITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSP 1098
Query: 375 CDRCSNTPRPSSS 413
TP P+++
Sbjct: 1099 PPTTMTTPSPTTT 1111
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 33.5 bits (73), Expect = 0.95
Identities = 29/78 (37%), Positives = 35/78 (44%)
Frame = +3
Query: 204 TPHPLTRTTQGIPTGTLVFPKYRPSRYPS*ANSP*ATTRTASLLCTGTPSRTYSP*SCDR 383
TP P T TT P T P P+ PS SP TT + TPS T +P S
Sbjct: 314 TPSPPTTTTPSPPITTTTTPP--PTTTPS---SPITTTPSPPTTTMTTPSPTTTPSS--P 366
Query: 384 CSNTPRPSSSCTGTPYST 437
+ T PSS+ T +P T
Sbjct: 367 ITTTTTPSSTTTPSPPPT 384
Score = 33.1 bits (72), Expect = 1.3
Identities = 28/79 (35%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +3
Query: 204 TPHPLTRTTQGIPTGTLVFPKYR-PSRYPS*ANSP*ATTRTASLLCTGTPSRTYSP*SCD 380
TP P T T PT T P PS P+ +P TT T S T TPS +
Sbjct: 196 TPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTT-TPSPPTTTTPSPPTITTTTP 254
Query: 381 RCSNTPRPSSSCTGTPYST 437
+ TP P ++ T TP T
Sbjct: 255 PPTTTPSPPTTTTTTPPPT 273
Score = 30.7 bits (66), Expect = 6.7
Identities = 28/78 (35%), Positives = 33/78 (42%)
Frame = +3
Query: 204 TPHPLTRTTQGIPTGTLVFPKYRPSRYPS*ANSP*ATTRTASLLCTGTPSRTYSP*SCDR 383
TP P T T PT T P P+ PS P TT T + T TPS + +
Sbjct: 56 TPSPPTTTPSPPPTSTTTLP---PTTTPS----P-PTTTTTTPPPTTTPSPPITTTTTPP 107
Query: 384 CSNTPRPSSSCTGTPYST 437
+ TP P S T TP T
Sbjct: 108 PTTTPSPPISTTTTPPPT 125
Score = 30.3 bits (65), Expect = 8.8
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 201 PTPHPLTRTTQGIPTGTLVFP-KYRPSRYPS*ANSP*ATTRTAS-LLCTGTPSRTYSP*S 374
P+P P+T TT PT T P PS + +P TT +S + T TPS T +P
Sbjct: 323 PSP-PITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSP 381
Query: 375 CDRCSNTPRPSSS 413
TP P+++
Sbjct: 382 PPTTMTTPSPTTT 394
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 33.5 bits (73), Expect = 0.95
Identities = 29/78 (37%), Positives = 35/78 (44%)
Frame = +3
Query: 204 TPHPLTRTTQGIPTGTLVFPKYRPSRYPS*ANSP*ATTRTASLLCTGTPSRTYSP*SCDR 383
TP P T TT P T P P+ PS SP TT + TPS T +P S
Sbjct: 1656 TPSPPTTTTPSPPITTTTTPP--PTTTPS---SPITTTPSPPTTTMTTPSPTTTPSS--P 1708
Query: 384 CSNTPRPSSSCTGTPYST 437
+ T PSS+ T +P T
Sbjct: 1709 ITTTTTPSSTTTPSPPPT 1726
Score = 33.1 bits (72), Expect = 1.3
Identities = 28/79 (35%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +3
Query: 204 TPHPLTRTTQGIPTGTLVFPKYR-PSRYPS*ANSP*ATTRTASLLCTGTPSRTYSP*SCD 380
TP P T T PT T P PS P+ +P TT T S T TPS +
Sbjct: 1538 TPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTT-TPSPPTTTTPSPPTITTTTP 1596
Query: 381 RCSNTPRPSSSCTGTPYST 437
+ TP P ++ T TP T
Sbjct: 1597 PPTTTPSPPTTTTTTPPPT 1615
Score = 31.9 bits (69), Expect = 2.9
Identities = 24/80 (30%), Positives = 35/80 (43%)
Frame = +3
Query: 201 PTPHPLTRTTQGIPTGTLVFPKYRPSRYPS*ANSP*ATTRTASLLCTGTPSRTYSP*SCD 380
PT P+T TT PT T + P+ P + T T + TG P+ T + +
Sbjct: 4150 PTTTPITTTTTVTPTPTPTGTQ-TPTTTPITTTTTVTPTPTPTGTQTGPPTHTSTAPIAE 4208
Query: 381 RCSNTPRPSSSCTGTPYSTN 440
++ P P SS T ST+
Sbjct: 4209 LTTSNPPPESSTPQTSRSTS 4228
Score = 30.3 bits (65), Expect = 8.8
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 201 PTPHPLTRTTQGIPTGTLVFP-KYRPSRYPS*ANSP*ATTRTAS-LLCTGTPSRTYSP*S 374
P+P P+T TT PT T P PS + +P TT +S + T TPS T +P
Sbjct: 1665 PSP-PITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSP 1723
Query: 375 CDRCSNTPRPSSS 413
TP P+++
Sbjct: 1724 PPTTMTTPSPTTT 1736
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 33.5 bits (73), Expect = 0.95
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Frame = +3
Query: 204 TPHPLTRTTQGIPTGTLVFPKYRPSRYP--S*ANSP*ATT---RTASLLCTGTPSRTYSP 368
T P T TT T T P+ S P S ++P ++T RT S++ T S T SP
Sbjct: 359 TSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPTSSTISARTTSIISAPTTSTTSSP 418
Query: 369 *----SCDRCSNTPRPSSSCTGTPYST 437
S S T P+SS T TP ++
Sbjct: 419 TTSTTSATTTSTTSAPTSSTTSTPQTS 445
>L46721-1|AAC41774.1| 164|Homo sapiens mucin protein.
Length = 164
Score = 33.1 bits (72), Expect = 1.3
Identities = 26/79 (32%), Positives = 37/79 (46%)
Frame = +3
Query: 201 PTPHPLTRTTQGIPTGTLVFPKYRPSRYPS*ANSP*ATTRTASLLCTGTPSRTYSP*SCD 380
P+P P T TT T T P + P+ ++P A T + +L T S T +P
Sbjct: 39 PSPVPTTSTTSAPTTSTTSAPTTSTTSAPT-TSTPSAPTTSTTL--APTTSTTSAP---- 91
Query: 381 RCSNTPRPSSSCTGTPYST 437
S T P+SS T TP ++
Sbjct: 92 TTSTTSTPTSSTTSTPQTS 110
>BC051193-1|AAH51193.1| 733|Homo sapiens NFXL1 protein protein.
Length = 733
Score = 32.7 bits (71), Expect = 1.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 300 SLLMMGIVTDDTLGRPACPWECPE 229
S ++ VTDD G+ CPW CP+
Sbjct: 195 SQFLVSSVTDDDFGKKDCPWPCPK 218
>AK131285-1|BAD18459.1| 736|Homo sapiens protein ( Homo sapiens
cDNA FLJ16238 fis, clone HCASM2003018, weakly similar
to Homo sapiens nuclear transcription factor NFX2 (NFX2)
mRNA. ).
Length = 736
Score = 32.7 bits (71), Expect = 1.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 300 SLLMMGIVTDDTLGRPACPWECPE 229
S ++ VTDD G+ CPW CP+
Sbjct: 38 SQFLVSSVTDDDFGKKDCPWPCPK 61
>AC107068-2|AAY40918.1| 733|Homo sapiens unknown protein.
Length = 733
Score = 32.7 bits (71), Expect = 1.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 300 SLLMMGIVTDDTLGRPACPWECPE 229
S ++ VTDD G+ CPW CP+
Sbjct: 195 SQFLVSSVTDDDFGKKDCPWPCPK 218
>Z34277-1|CAA84031.1| 477|Homo sapiens mucin protein.
Length = 477
Score = 31.1 bits (67), Expect = 5.1
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Frame = +3
Query: 204 TPHPLTRTTQGIPTGTLVFPKYRPSRYP--S*ANSP*ATT---RTASLLCTGTPSRTYSP 368
T P T TT T T P+ S P S ++P ++T RT S++ T S T P
Sbjct: 183 TSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPTSSTISARTTSIISAPTTSTTSFP 242
Query: 369 *----SCDRCSNTPRPSSSCTGTPYST 437
S S T P+SS T TP ++
Sbjct: 243 TTSTTSATTTSTTSAPTSSTTSTPQTS 269
>BT009908-1|AAP88910.1| 330|Homo sapiens homeo box C13 protein.
Length = 330
Score = 30.3 bits (65), Expect = 8.8
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +1
Query: 1 LCRNKQNVWKGFRNRHLSDSRLLSRTQSPRLHST 102
L + +W F+NR + + +++S++++P LHST
Sbjct: 299 LSERQVTIW--FQNRRVKEKKVVSKSKAPHLHST 330
>BC090850-1|AAH90850.1| 330|Homo sapiens homeobox C13 protein.
Length = 330
Score = 30.3 bits (65), Expect = 8.8
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +1
Query: 1 LCRNKQNVWKGFRNRHLSDSRLLSRTQSPRLHST 102
L + +W F+NR + + +++S++++P LHST
Sbjct: 299 LSERQVTIW--FQNRRVKEKKVVSKSKAPHLHST 330
>BC002754-1|AAH02754.1| 330|Homo sapiens HOXC13 protein protein.
Length = 330
Score = 30.3 bits (65), Expect = 8.8
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +1
Query: 1 LCRNKQNVWKGFRNRHLSDSRLLSRTQSPRLHST 102
L + +W F+NR + + +++S++++P LHST
Sbjct: 299 LSERQVTIW--FQNRRVKEKKVVSKSKAPHLHST 330
>AK024027-1|BAB14786.1| 146|Homo sapiens protein ( Homo sapiens
cDNA FLJ13965 fis, clone Y79AA1001391, moderately
similar to HOMEOBOX PROTEIN HOX-A13. ).
Length = 146
Score = 30.3 bits (65), Expect = 8.8
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +1
Query: 1 LCRNKQNVWKGFRNRHLSDSRLLSRTQSPRLHST 102
L + +W F+NR + + +++S++++P LHST
Sbjct: 115 LSERQVTIW--FQNRRVKEKKVVSKSKAPHLHST 146
>AJ438986-1|CAD27941.1| 330|Homo sapiens hypothetical protein
protein.
Length = 330
Score = 30.3 bits (65), Expect = 8.8
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +1
Query: 1 LCRNKQNVWKGFRNRHLSDSRLLSRTQSPRLHST 102
L + +W F+NR + + +++S++++P LHST
Sbjct: 299 LSERQVTIW--FQNRRVKEKKVVSKSKAPHLHST 330
>AF263466-1|AAF73439.1| 330|Homo sapiens HOXC13 protein.
Length = 330
Score = 30.3 bits (65), Expect = 8.8
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +1
Query: 1 LCRNKQNVWKGFRNRHLSDSRLLSRTQSPRLHST 102
L + +W F+NR + + +++S++++P LHST
Sbjct: 299 LSERQVTIW--FQNRRVKEKKVVSKSKAPHLHST 330
>AF255676-1|AAF67760.1| 330|Homo sapiens homeoprotein C13 protein.
Length = 330
Score = 30.3 bits (65), Expect = 8.8
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +1
Query: 1 LCRNKQNVWKGFRNRHLSDSRLLSRTQSPRLHST 102
L + +W F+NR + + +++S++++P LHST
Sbjct: 299 LSERQVTIW--FQNRRVKEKKVVSKSKAPHLHST 330
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,430,859
Number of Sequences: 237096
Number of extensions: 2516291
Number of successful extensions: 4802
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4778
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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