Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30356
         (828 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P91384 Cluster: Serpentine receptor, class w protein 11...    36   0.94 
UniRef50_Q97FL6 Cluster: Sensory protein containing histidine ki...    33   6.6  
UniRef50_Q8EUY8 Cluster: Putative uncharacterized protein MYPE78...    33   6.6  
UniRef50_Q0UTE0 Cluster: Predicted protein; n=1; Phaeosphaeria n...    33   6.6  
UniRef50_Q8G983 Cluster: Peptide synthetase; n=118; cellular org...    33   8.7  

>UniRef50_P91384 Cluster: Serpentine receptor, class w protein 112;
           n=1; Caenorhabditis elegans|Rep: Serpentine receptor,
           class w protein 112 - Caenorhabditis elegans
          Length = 375

 Score = 36.3 bits (80), Expect = 0.94
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
 Frame = +3

Query: 459 LFVFTRCYKRKSSIA*IKVIIRIPDVVNALLNL**FIYFRCIVLKPCFETSDYCNVSIKR 638
           + V TR   R SSI  I   + I D+++A+ N+   I      + PC+  + Y N+ I  
Sbjct: 55  VIVLTRPSMRTSSINIIMTAVAIADIISAIYNIHLKIVLILTDIYPCYSKNLYHNLIILD 114

Query: 639 PFAFKLKSSSRR--FWLGRDFSTTFTILKEVANP 734
              + L+  +RR   WL    +T  T++  V NP
Sbjct: 115 NCLYCLQDYTRRCSTWLSLSIATIRTLV--VRNP 146


>UniRef50_Q97FL6 Cluster: Sensory protein containing histidine
           kinase, PAS anf GAF domains; n=1; Clostridium
           acetobutylicum|Rep: Sensory protein containing histidine
           kinase, PAS anf GAF domains - Clostridium acetobutylicum
          Length = 471

 Score = 33.5 bits (73), Expect = 6.6
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +2

Query: 212 F*QKSVPNDSAKLNLTMHFTISKLNLDNKFQLTRSSTKTKLKFKLH 349
           F  K +  DS  LN+       KLN D K +   S TKT   FK++
Sbjct: 425 FKDKKLREDSLGLNIVKSIVTDKLNGDIKIETNESGTKTVFDFKIY 470


>UniRef50_Q8EUY8 Cluster: Putative uncharacterized protein MYPE7800;
           n=4; Mycoplasma penetrans|Rep: Putative uncharacterized
           protein MYPE7800 - Mycoplasma penetrans
          Length = 1444

 Score = 33.5 bits (73), Expect = 6.6
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +3

Query: 690 DFSTTFTILKEVANPGFLNPGGEIAGTLTVGQFSNHFW 803
           +F TTF  ++ + NP     G +I+GTLT+     ++W
Sbjct: 758 NFITTFLNMQNIVNPTITASGDDISGTLTINVAVPYYW 795


>UniRef50_Q0UTE0 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 153

 Score = 33.5 bits (73), Expect = 6.6
 Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
 Frame = -2

Query: 770 SACNFPPRIKETRIGHFL*NRESCGKVPPKPKAS----TGAFQFECKRP 636
           S+ N   R+KETR  H L  RE+CG  P  P        GA  F C  P
Sbjct: 18  SSVNAAGRMKETRSTHELLQREACGDPPRTPSPGFACLEGAKDFPCTSP 66


>UniRef50_Q8G983 Cluster: Peptide synthetase; n=118; cellular
            organisms|Rep: Peptide synthetase - Oscillatoria agardhii
            (Planktothrix agardhii)
          Length = 2816

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
 Frame = -3

Query: 796  WLEN-WPTVR-VPAISPPGLRKPGLATSFKIVKV--VEKSRPSQKRRLELFNLNANGLLI 629
            WL   W TV  +P I PP  R   +A   +I     VEK+R   ++   +FN   N +L+
Sbjct: 2540 WLNQPWSTVMPLPLIHPPEKRSHPVAEVAEITVTLNVEKTRALLQQVPSVFNTQINDVLL 2599

Query: 628  LTLQ*SLVSKHGLSTIHL 575
              L  +L +  G STI L
Sbjct: 2600 TALAQTLTAWTGNSTILL 2617


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 772,417,510
Number of Sequences: 1657284
Number of extensions: 15076638
Number of successful extensions: 31277
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31264
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 71734006925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)