Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30356
         (828 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D17570-1|BAA04495.1|  351|Homo sapiens zona-pellucida-binding pr...    30   8.9  
BT006822-1|AAP35468.1|  351|Homo sapiens zona pellucida binding ...    30   8.9  
BC005223-1|AAH05223.1|  351|Homo sapiens zona pellucida binding ...    30   8.9  
AC034148-1|AAS07558.1|  320|Homo sapiens unknown protein.              30   8.9  

>D17570-1|BAA04495.1|  351|Homo sapiens zona-pellucida-binding
           protein (sp38) protein.
          Length = 351

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = -2

Query: 614 VTGLKTWLKYYTP---KIYKLLQIK*GIYNIRDPYYYF 510
           ++G+ T    Y P   +I K LQ+K  IY  R+P+YY+
Sbjct: 134 MSGIYTCFLEYKPTVEEIVKRLQLKYAIYAYREPHYYY 171


>BT006822-1|AAP35468.1|  351|Homo sapiens zona pellucida binding
           protein protein.
          Length = 351

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = -2

Query: 614 VTGLKTWLKYYTP---KIYKLLQIK*GIYNIRDPYYYF 510
           ++G+ T    Y P   +I K LQ+K  IY  R+P+YY+
Sbjct: 134 MSGIYTCFLEYKPTVEEIVKRLQLKYAIYAYREPHYYY 171


>BC005223-1|AAH05223.1|  351|Homo sapiens zona pellucida binding
           protein protein.
          Length = 351

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = -2

Query: 614 VTGLKTWLKYYTP---KIYKLLQIK*GIYNIRDPYYYF 510
           ++G+ T    Y P   +I K LQ+K  IY  R+P+YY+
Sbjct: 134 MSGIYTCFLEYKPTVEEIVKRLQLKYAIYAYREPHYYY 171


>AC034148-1|AAS07558.1|  320|Homo sapiens unknown protein.
          Length = 320

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = -2

Query: 614 VTGLKTWLKYYTP---KIYKLLQIK*GIYNIRDPYYYF 510
           ++G+ T    Y P   +I K LQ+K  IY  R+P+YY+
Sbjct: 134 MSGIYTCFLEYKPTVEEIVKRLQLKYAIYAYREPHYYY 171


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,187,285
Number of Sequences: 237096
Number of extensions: 2305647
Number of successful extensions: 3799
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3798
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)