Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30355
         (881 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    66   1e-12
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    66   1e-12
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    26   1.3  
Z22930-5|CAA80517.1|  275|Anopheles gambiae trypsin protein.           23   9.3  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.3  
AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5' nucleo...    23   9.3  

>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 66.5 bits (155), Expect = 1e-12
 Identities = 32/83 (38%), Positives = 47/83 (56%)
 Frame = +2

Query: 5   VMRIYGAEGLKTHIRQQIELAQYFAKLVRADERFVIGPEPTMALVCFRLKDGDTITRQLL 184
           V+R+YG + L+ HIR+    A+ F  L RAD+RF I  E  M L CFRLK  + ++  LL
Sbjct: 369 VLRLYGVDNLQAHIRRHCAFAKQFEALCRADDRFEIFGEVAMGLACFRLKGTNELSEALL 428

Query: 185 ENITQKKKVFMVAGTHRDRYVIR 253
           + I  +  + +V     D Y +R
Sbjct: 429 KRINGRGNIHLVPSKVNDVYFLR 451



 Score = 33.5 bits (73), Expect = 0.009
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +1

Query: 253 IVICSRLTKKEDVDYSWSQIKKETDLIYSDK 345
           + +CSR T+  D+DYSW ++    D + +++
Sbjct: 452 MAVCSRFTEPADIDYSWKEVAAAADELLAEQ 482


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 66.5 bits (155), Expect = 1e-12
 Identities = 32/83 (38%), Positives = 47/83 (56%)
 Frame = +2

Query: 5   VMRIYGAEGLKTHIRQQIELAQYFAKLVRADERFVIGPEPTMALVCFRLKDGDTITRQLL 184
           V+R+YG + L+ HIR+    A+ F  L RAD+RF I  E  M L CFRLK  + ++  LL
Sbjct: 400 VLRLYGVDNLQAHIRRHCAFAKQFEALCRADDRFEIFGEVAMGLACFRLKGTNELSEALL 459

Query: 185 ENITQKKKVFMVAGTHRDRYVIR 253
           + I  +  + +V     D Y +R
Sbjct: 460 KRINGRGNIHLVPSKVNDVYFLR 482



 Score = 33.5 bits (73), Expect = 0.009
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +1

Query: 253 IVICSRLTKKEDVDYSWSQIKKETDLIYSDK 345
           + +CSR T+  D+DYSW ++    D + +++
Sbjct: 483 MAVCSRFTEPADIDYSWKEVAAAADELLAEQ 513


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = -3

Query: 294 IDVFLLSQSGADHDLMTYLSLCV 226
           IDV+ L++ GA+ DLM+++S  V
Sbjct: 283 IDVYRLTKKGANLDLMSFISFKV 305


>Z22930-5|CAA80517.1|  275|Anopheles gambiae trypsin protein.
          Length = 275

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +1

Query: 289 VDYSWSQIKKETDLIYSDKI 348
           +DY +S ++ ET+L +SD +
Sbjct: 131 IDYDFSLMELETELTFSDVV 150


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 241  SIPVRSGHHKHFLFLRYIFQQLSRNCVTVFQ 149
            S+ VR G HK+FL L    Q++    V + Q
Sbjct: 2063 SLAVRHGFHKYFLHLSPGLQEVIDRFVRIQQ 2093


>AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 568

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +2

Query: 659 VSKRVHVCDIITMEVIDPTHYYFAQQKPPVRFCGSICTL 775
           VS R   C +   E +DP H Y       +R  GS  T+
Sbjct: 489 VSLRCRYCSVPHYEPLDPEHVYRVATGAYIRKGGSGYTM 527


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 953,705
Number of Sequences: 2352
Number of extensions: 19924
Number of successful extensions: 45
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)