Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30355
(881 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49068-4|CAC42319.1| 705|Caenorhabditis elegans Hypothetical pr... 72 6e-13
Z49068-3|CAA88862.1| 650|Caenorhabditis elegans Hypothetical pr... 72 6e-13
Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amin... 56 3e-08
AF047651-8|AAV58886.1| 514|Caenorhabditis elegans Biogenic amin... 40 0.003
AF047651-7|AAC02721.2| 523|Caenorhabditis elegans Biogenic amin... 40 0.003
AY669394-1|AAU05399.1| 487|Caenorhabditis elegans aromatic L-am... 36 0.029
AY669393-1|AAU05398.1| 478|Caenorhabditis elegans aromatic L-am... 36 0.029
AC006610-7|AAK85451.1| 392|Caenorhabditis elegans Hypothetical ... 31 1.1
AF026212-1|AAF99971.1| 807|Caenorhabditis elegans Hypothetical ... 29 4.4
Z70754-4|CAA94774.1| 130|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z49068-4|CAC42319.1| 705|Caenorhabditis elegans Hypothetical
protein K01C8.3b protein.
Length = 705
Score = 71.7 bits (168), Expect = 6e-13
Identities = 34/83 (40%), Positives = 52/83 (62%)
Frame = +2
Query: 5 VMRIYGAEGLKTHIRQQIELAQYFAKLVRADERFVIGPEPTMALVCFRLKDGDTITRQLL 184
V+R+YG +GL+ +IR+ + LA+ L+RAD +F I E M LVCFR+K D + + LL
Sbjct: 440 VIRMYGIDGLQKYIREHVRLAKKMETLLRADAKFEIVNEVIMGLVCFRMKGDDELNQTLL 499
Query: 185 ENITQKKKVFMVAGTHRDRYVIR 253
+ ++ MV + DR+VIR
Sbjct: 500 TRLNASGRIHMVPASLGDRFVIR 522
>Z49068-3|CAA88862.1| 650|Caenorhabditis elegans Hypothetical
protein K01C8.3a protein.
Length = 650
Score = 71.7 bits (168), Expect = 6e-13
Identities = 34/83 (40%), Positives = 52/83 (62%)
Frame = +2
Query: 5 VMRIYGAEGLKTHIRQQIELAQYFAKLVRADERFVIGPEPTMALVCFRLKDGDTITRQLL 184
V+R+YG +GL+ +IR+ + LA+ L+RAD +F I E M LVCFR+K D + + LL
Sbjct: 440 VIRMYGIDGLQKYIREHVRLAKKMETLLRADAKFEIVNEVIMGLVCFRMKGDDELNQTLL 499
Query: 185 ENITQKKKVFMVAGTHRDRYVIR 253
+ ++ MV + DR+VIR
Sbjct: 500 TRLNASGRIHMVPASLGDRFVIR 522
>Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical
protein ZK829.2 protein.
Length = 905
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/83 (31%), Positives = 45/83 (54%)
Frame = +2
Query: 5 VMRIYGAEGLKTHIRQQIELAQYFAKLVRADERFVIGPEPTMALVCFRLKDGDTITRQLL 184
++R +G E L+ IR+ I L Q K+++ D RF + + M L+CFR K D + LL
Sbjct: 697 MIRSFGVENLQNQIREHIRLGQVMTKILQKDLRFEVCNKVVMGLICFRAKSNDMFNKALL 756
Query: 185 ENITQKKKVFMVAGTHRDRYVIR 253
+ V + + ++++VIR
Sbjct: 757 YRCNETGNVSLASCVLQNKFVIR 779
>Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amino
acid decarboxylaseprotein.
Length = 625
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/83 (31%), Positives = 45/83 (54%)
Frame = +2
Query: 5 VMRIYGAEGLKTHIRQQIELAQYFAKLVRADERFVIGPEPTMALVCFRLKDGDTITRQLL 184
++R +G E L+ IR+ I L Q K+++ D RF + + M L+CFR K D + LL
Sbjct: 417 MIRSFGVENLQNQIREHIRLGQVMTKILQKDLRFEVCNKVVMGLICFRAKSNDMFNKALL 476
Query: 185 ENITQKKKVFMVAGTHRDRYVIR 253
+ V + + ++++VIR
Sbjct: 477 YRCNETGNVSLASCVLQNKFVIR 499
>AF047651-8|AAV58886.1| 514|Caenorhabditis elegans Biogenic amine
synthesis relatedprotein 1, isoform a protein.
Length = 514
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +2
Query: 5 VMRIYGAEGLKTHIRQQIELAQYFAKLVRADERFVIGPEPTMALVCFRLKDGDTITRQLL 184
V+R G + ++ ++R+ LA F+KL+ + +F + L CFRLK+ + L
Sbjct: 403 VLRNMGVDKIREYLRRTELLAAEFSKLILENGKFEHFVPQHLGLTCFRLKNSTNADNEKL 462
Query: 185 EN-ITQKKKVFMVAGTHRDRYVIR 253
N I +++ +V T Y +R
Sbjct: 463 CNAINDDRRIHLVPSTVHGTYFLR 486
>AF047651-7|AAC02721.2| 523|Caenorhabditis elegans Biogenic amine
synthesis relatedprotein 1, isoform b protein.
Length = 523
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +2
Query: 5 VMRIYGAEGLKTHIRQQIELAQYFAKLVRADERFVIGPEPTMALVCFRLKDGDTITRQLL 184
V+R G + ++ ++R+ LA F+KL+ + +F + L CFRLK+ + L
Sbjct: 412 VLRNMGVDKIREYLRRTELLAAEFSKLILENGKFEHFVPQHLGLTCFRLKNSTNADNEKL 471
Query: 185 EN-ITQKKKVFMVAGTHRDRYVIR 253
N I +++ +V T Y +R
Sbjct: 472 CNAINDDRRIHLVPSTVHGTYFLR 495
>AY669394-1|AAU05399.1| 487|Caenorhabditis elegans aromatic L-amino
acid decarboxylase protein.
Length = 487
Score = 36.3 bits (80), Expect = 0.029
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 5 VMRIYGAEGLKTHIRQQIELAQYFAKLVRADERFVIGPEPTMALVCFRLKDGDTITRQLL 184
V+R G + ++ ++R+ LA F+KL+ + +F + L CFRLK+ + L
Sbjct: 412 VLRNMGVDKIREYLRRTELLAAEFSKLILENGKFEHFVPQHLGLTCFRLKNSTNADNEKL 471
Query: 185 EN-ITQKKKVFMVAGT 229
N I +++ +V T
Sbjct: 472 CNAINDDRRIHLVPST 487
>AY669393-1|AAU05398.1| 478|Caenorhabditis elegans aromatic L-amino
acid decarboxylase protein.
Length = 478
Score = 36.3 bits (80), Expect = 0.029
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 5 VMRIYGAEGLKTHIRQQIELAQYFAKLVRADERFVIGPEPTMALVCFRLKDGDTITRQLL 184
V+R G + ++ ++R+ LA F+KL+ + +F + L CFRLK+ + L
Sbjct: 403 VLRNMGVDKIREYLRRTELLAAEFSKLILENGKFEHFVPQHLGLTCFRLKNSTNADNEKL 462
Query: 185 EN-ITQKKKVFMVAGT 229
N I +++ +V T
Sbjct: 463 CNAINDDRRIHLVPST 478
>AC006610-7|AAK85451.1| 392|Caenorhabditis elegans Hypothetical
protein C30F12.5 protein.
Length = 392
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -2
Query: 205 LFLRYIFQQLSRNCVTVFQSKTDQCHSRFGPNHKTFV 95
L L ++F + R+ TVF +T+QC S G KTFV
Sbjct: 12 LLLLFVFIEQVRS--TVFDDETEQCKSESGYGRKTFV 46
>AF026212-1|AAF99971.1| 807|Caenorhabditis elegans Hypothetical
protein F52G3.3 protein.
Length = 807
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 220 HHKHFLFLRYIFQQLSRNCVTVFQSKTDQCHSRFG 116
H K L + ++F+ +SRNC F K Q FG
Sbjct: 414 HFKFILKIIFVFRSISRNCGVQFFQKMHQSDLPFG 448
>Z70754-4|CAA94774.1| 130|Caenorhabditis elegans Hypothetical
protein F58E6.4 protein.
Length = 130
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 213 NTFFFCVIFSNNCRVIVS 160
N F+FCV F NNC +S
Sbjct: 98 NQFYFCVCFENNCNFPLS 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,962,694
Number of Sequences: 27780
Number of extensions: 461240
Number of successful extensions: 1072
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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