Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30352
(695 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 27 0.11
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 25 0.78
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 4.2
AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory recept... 22 5.5
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 21 7.3
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 9.6
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 21 9.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 9.6
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 9.6
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 9.6
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 9.6
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 27.5 bits (58), Expect = 0.11
Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 21 SDPTSESIEERSSGDKMANLDEV-EQKSNKPERVRNRIREPASAGKTPSVTFQV 179
SD ++ ++ + K + D + + N + N + PAS +TP T Q+
Sbjct: 387 SDHLAKHVKTHNGNGKKGSSDSCSDSEENSQSDITNNVNSPASMNQTPPPTAQM 440
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 24.6 bits (51), Expect = 0.78
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 126 CFVLFRVYLIFVQLHPNSPFYLLKI 52
C + FRV+++++ L P Y L+I
Sbjct: 302 CLIPFRVFILWIILVPEEQVYHLEI 326
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 22.2 bits (45), Expect = 4.2
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = -2
Query: 337 PRPLKILKLNGLGISGSACGSPLITGIFMD--IPSGKSSISSYTAH*VGLISLGITWKVT 164
PR + LN + S C S + + PSG+S +S A G+ +L
Sbjct: 66 PRSISEDPLNCRDLPNSRCNSRESSDSLVQPRCPSGESMLSERAALLRGVPTLSPVGVAL 125
Query: 163 DGVLPALAGSLIL 125
LPA A + +L
Sbjct: 126 PPTLPAAAAAALL 138
>AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory receptor
candidate 54 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 137 FPDSVSYSFGFI*FLFNFIQIRHF 66
F ++V++ FG I LF +QI F
Sbjct: 70 FYENVNFQFGSILALFGVVQIYIF 93
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 21.4 bits (43), Expect = 7.3
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1
Query: 653 PVLESRILSRVALQTFTITCWGK 585
P+L SR LQT+ T W K
Sbjct: 528 PLLVVEYCSRGDLQTYLRTAWDK 550
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.0 bits (42), Expect = 9.6
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +3
Query: 510 PTVNAGGLYPCVSPMTLHYCGKAPLFPP 593
P+V+ Y SP+T H L PP
Sbjct: 711 PSVSVASPYMLQSPLTPHEAFDVKLPPP 738
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.0 bits (42), Expect = 9.6
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +3
Query: 510 PTVNAGGLYPCVSPMTLHYCGKAPLFPP 593
P+V+ Y SP+T H L PP
Sbjct: 603 PSVSVASPYMLQSPLTPHEAFDVKLPPP 630
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.6
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 85 KLNKNQ-INPKEYETESGNQPVRVKHHRLLSK*FRA 189
+L K Q I+ +YE +SG+ P R+ + + RA
Sbjct: 1389 QLQKLQGIDDGDYENDSGSGPDRIGRRKTIHNLERA 1424
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.6
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 85 KLNKNQ-INPKEYETESGNQPVRVKHHRLLSK*FRA 189
+L K Q I+ +YE +SG+ P R+ + + RA
Sbjct: 1389 QLQKLQGIDDGDYENDSGSGPDRIGRRKTIHNLERA 1424
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.6
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 85 KLNKNQ-INPKEYETESGNQPVRVKHHRLLSK*FRA 189
+L K Q I+ +YE +SG+ P R+ + + RA
Sbjct: 1389 QLQKLQGIDDGDYENDSGSGPDRIGRRKTIHNLERA 1424
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.6
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 85 KLNKNQ-INPKEYETESGNQPVRVKHHRLLSK*FRA 189
+L K Q I+ +YE +SG+ P R+ + + RA
Sbjct: 1389 QLQKLQGIDDGDYENDSGSGPDRIGRRKTIHNLERA 1424
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,846
Number of Sequences: 336
Number of extensions: 4608
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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