Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30352
         (695 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X62822-1|CAA44634.1|  406|Homo sapiens beta-galactoside  alpha-2...    30   9.1  
X54363-1|CAA38246.1|  405|Homo sapiens B cell antigen CD75 protein.    30   9.1  
X17247-1|CAA35111.1|  406|Homo sapiens protein ( Human mRNA for ...    30   9.1  
BC040009-1|AAH40009.1|  406|Homo sapiens ST6 beta-galactosamide ...    30   9.1  
BC031476-1|AAH31476.1|  406|Homo sapiens ST6 beta-galactosamide ...    30   9.1  

>X62822-1|CAA44634.1|  406|Homo sapiens beta-galactoside
           alpha-2,6-sialyltransferase protein.
          Length = 406

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 114 FRVYLIFVQLHPNSPFYLLK 55
           F  Y  + +LHPN PFY+LK
Sbjct: 278 FNNYKTYRKLHPNQPFYILK 297


>X54363-1|CAA38246.1|  405|Homo sapiens B cell antigen CD75 protein.
          Length = 405

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 114 FRVYLIFVQLHPNSPFYLLK 55
           F  Y  + +LHPN PFY+LK
Sbjct: 277 FNNYKTYRKLHPNQPFYILK 296


>X17247-1|CAA35111.1|  406|Homo sapiens protein ( Human mRNA for
           sialyltransferase (CMP-N-acetylneuraminate-beta-
           galactoside alpha-2,6-sialyltransferase) (EC 2.4.99.1). 
           ).
          Length = 406

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 114 FRVYLIFVQLHPNSPFYLLK 55
           F  Y  + +LHPN PFY+LK
Sbjct: 278 FNNYKTYRKLHPNQPFYILK 297


>BC040009-1|AAH40009.1|  406|Homo sapiens ST6 beta-galactosamide
           alpha-2,6-sialyltranferase 1 protein.
          Length = 406

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 114 FRVYLIFVQLHPNSPFYLLK 55
           F  Y  + +LHPN PFY+LK
Sbjct: 278 FNNYKTYRKLHPNQPFYILK 297


>BC031476-1|AAH31476.1|  406|Homo sapiens ST6 beta-galactosamide
           alpha-2,6-sialyltranferase 1 protein.
          Length = 406

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 114 FRVYLIFVQLHPNSPFYLLK 55
           F  Y  + +LHPN PFY+LK
Sbjct: 278 FNNYKTYRKLHPNQPFYILK 297


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,563,615
Number of Sequences: 237096
Number of extensions: 2809129
Number of successful extensions: 5239
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5238
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)