Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30352
(695 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF100305-4|AAC68916.2| 426|Caenorhabditis elegans Hypothetical ... 30 1.4
AF100305-3|AAL65795.1| 426|Caenorhabditis elegans Hypothetical ... 30 1.4
AF039713-1|AAB96725.1| 268|Caenorhabditis elegans Hypothetical ... 30 1.8
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF100305-5|AAN65285.1| 353|Caenorhabditis elegans Hypothetical ... 29 3.2
Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical pr... 28 5.5
U80452-9|AAB37854.2| 179|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF039048-10|AAB94240.2| 421|Caenorhabditis elegans Hypothetical... 28 5.5
Z70269-3|CAA94222.1| 290|Caenorhabditis elegans Hypothetical pr... 28 7.3
AC092690-3|AAK73857.1| 1145|Caenorhabditis elegans Hypothetical ... 28 7.3
Z83125-9|CAB05624.1| 338|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 27 9.7
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 27 9.7
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 27 9.7
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 27 9.7
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 27 9.7
L14331-8|AAA28100.1| 586|Caenorhabditis elegans C.elegans homeo... 27 9.7
AF067608-15|AAO38679.1| 470|Caenorhabditis elegans Hypothetical... 27 9.7
AF067608-14|AAK95864.1| 551|Caenorhabditis elegans Hypothetical... 27 9.7
AF036702-14|AAB88378.2| 396|Caenorhabditis elegans Hypothetical... 27 9.7
AF036702-13|AAB88379.2| 648|Caenorhabditis elegans Hypothetical... 27 9.7
>AF100305-4|AAC68916.2| 426|Caenorhabditis elegans Hypothetical
protein W04B5.3a protein.
Length = 426
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 138 PASAGKTPSVTFQVIPSEISPTQWAVYEEMEDLPEGISIKMPVIKGDPQAL-PEIPRPF 311
P SA TP + Q +P ++S Q +Y+ + +P G + P ++ Q + +P P+
Sbjct: 304 PQSANSTPGIP-QPLPQQMSRQQAPIYQNQQQMPPGYN---PYLQQQQQQMAATVPMPY 358
>AF100305-3|AAL65795.1| 426|Caenorhabditis elegans Hypothetical
protein W04B5.3b protein.
Length = 426
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 138 PASAGKTPSVTFQVIPSEISPTQWAVYEEMEDLPEGISIKMPVIKGDPQAL-PEIPRPF 311
P SA TP + Q +P ++S Q +Y+ + +P G + P ++ Q + +P P+
Sbjct: 304 PQSANSTPGIP-QPLPQQMSRQQAPIYQNQQQMPPGYN---PYLQQQQQQMAATVPMPY 358
>AF039713-1|AAB96725.1| 268|Caenorhabditis elegans Hypothetical
protein F57B10.8 protein.
Length = 268
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +3
Query: 24 DPTSESIEERSSGDKMANLDEVEQKSNKPE-RVRNRIREP-ASAGKTPSVTFQVIPSEIS 197
+P ESIE ++ D+ NLD+ E K+ + E +P KT V F IP + +
Sbjct: 35 EPKEESIETDNNEDEAGNLDDSEIKTEESEDDEMETFEDPEQKQKKTGVVFFSTIPPKYN 94
Query: 198 PTQWAVYEE 224
+ Y E
Sbjct: 95 VVRMREYFE 103
>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical protein
C38D4.3 protein.
Length = 1784
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 36 ESIEERSSGDKMANLDEVEQKSNKPERVRNRIREPASAGKTPSVTFQVIPSE 191
ES E + +++ +EV+Q + +PE+ R EP P V VIP E
Sbjct: 1260 ESKSEEVNEEEVVESEEVQQDAKEPEKTEKRQEEP-----EPEVMQPVIPEE 1306
>AF100305-5|AAN65285.1| 353|Caenorhabditis elegans Hypothetical
protein W04B5.3c protein.
Length = 353
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 138 PASAGKTPSVTFQVIPSEISPTQWAVYEEMEDLPEG 245
P SA TP + Q +P ++S Q +Y+ + +P G
Sbjct: 304 PQSANSTPGIP-QPLPQQMSRQQAPIYQNQQQMPPG 338
>Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical
protein B0379.3b protein.
Length = 1050
Score = 28.3 bits (60), Expect = 5.5
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +3
Query: 3 ETSNTDSDPTSESIEERSSGDKMANLDEVEQKSNKPERVRNRIREPASAGKTPSVTFQVI 182
E S +D DP + I+ + DK+ E E +S E+ ++P S +T T++
Sbjct: 525 EGSYSDEDPEQKEIKRQRRKDKLKKKQERELRSR--EKHTKSKQQPPSKIETRFNTYKK- 581
Query: 183 PSEISPTQWAVYEEMEDLPEGISIKMPVIK-GDPQALPEIP 302
SE S T + ++ + +++ PV++ A P IP
Sbjct: 582 KSESSATDTSNTPPVDTV--NVALPTPVVESSSTTAAPSIP 620
>Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical
protein B0379.3a protein.
Length = 1054
Score = 28.3 bits (60), Expect = 5.5
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +3
Query: 3 ETSNTDSDPTSESIEERSSGDKMANLDEVEQKSNKPERVRNRIREPASAGKTPSVTFQVI 182
E S +D DP + I+ + DK+ E E +S E+ ++P S +T T++
Sbjct: 529 EGSYSDEDPEQKEIKRQRRKDKLKKKQERELRSR--EKHTKSKQQPPSKIETRFNTYKK- 585
Query: 183 PSEISPTQWAVYEEMEDLPEGISIKMPVIK-GDPQALPEIP 302
SE S T + ++ + +++ PV++ A P IP
Sbjct: 586 KSESSATDTSNTPPVDTV--NVALPTPVVESSSTTAAPSIP 624
>U80452-9|AAB37854.2| 179|Caenorhabditis elegans Hypothetical
protein C16C8.12 protein.
Length = 179
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +3
Query: 78 LDEVEQKSNKPERVRNRIRE-PASAGKTPSVTFQVIPSEISPTQWAVYEEMEDLPEGISI 254
+ E ++ + R++N RE P+SAG Q + +I Q +++EM+ + E +
Sbjct: 8 MSEFQKLCAETSRIQNEFREIPSSAGNALLKDTQEMCQKILKKQDELHDEMKHVQESLMS 67
Query: 255 KMPVIKGD 278
++ +K +
Sbjct: 68 ELNSVKNE 75
>AF039048-10|AAB94240.2| 421|Caenorhabditis elegans Hypothetical
protein F16B4.9 protein.
Length = 421
Score = 28.3 bits (60), Expect = 5.5
Identities = 9/41 (21%), Positives = 23/41 (56%)
Frame = +1
Query: 28 RLVKALKNDLQEIKWRIWMKLNKNQINPKEYETESGNQPVR 150
+L LK + ++ W +W + + +++ K YE E+ + ++
Sbjct: 230 KLESTLKYQMFKVVWNVWRRFERVEMSVKMYERETPGEVMK 270
>Z70269-3|CAA94222.1| 290|Caenorhabditis elegans Hypothetical
protein ZK1086.3 protein.
Length = 290
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/35 (31%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 138 PASAGKTPSVT-FQVIPSEISPTQWAVYEEMEDLP 239
P + GK P T F+V+P++ T+ +Y+++ +P
Sbjct: 217 PFAIGKNPGFTRFRVLPNQSQKTRKYIYQDVTTIP 251
>AC092690-3|AAK73857.1| 1145|Caenorhabditis elegans Hypothetical
protein BE0003N10.3 protein.
Length = 1145
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 138 PASAGKTPSVT-FQVIPSEISPTQWAVYEEMEDLP 239
P + GK P T F+V+P++ T+ VY+++ +P
Sbjct: 254 PFAIGKEPGFTKFRVLPNQSQKTRKYVYQDVTTIP 288
>Z83125-9|CAB05624.1| 338|Caenorhabditis elegans Hypothetical
protein T15D6.11 protein.
Length = 338
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 138 PASAGKTPSVT-FQVIPSEISPTQWAVYEEMEDLP 239
P + GK P T F+V+P++ T+ VY+++ +P
Sbjct: 200 PFAIGKEPGFTKFRVLPNQNQKTREYVYQDVTTIP 234
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 120 RNRIREPASAGKTPSVTFQVIPSEISPTQWAVYEEMEDLPEGISIK 257
R +I P +A P VTF ++ISPT V E D ++I+
Sbjct: 4622 RAKILVPFAASPAPKVTFSKGENKISPTDPRVKVEYSDFLATLTIE 4667
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 120 RNRIREPASAGKTPSVTFQVIPSEISPTQWAVYEEMEDLPEGISIK 257
R +I P +A P VTF ++ISPT V E D ++I+
Sbjct: 5151 RAKILVPFAASPAPKVTFSKGENKISPTDPRVKVEYSDFLATLTIE 5196
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 120 RNRIREPASAGKTPSVTFQVIPSEISPTQWAVYEEMEDLPEGISIK 257
R +I P +A P VTF ++ISPT V E D ++I+
Sbjct: 4832 RAKILVPFAASPAPKVTFSKGENKISPTDPRVKVEYSDFLATLTIE 4877
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 120 RNRIREPASAGKTPSVTFQVIPSEISPTQWAVYEEMEDLPEGISIK 257
R +I P +A P VTF ++ISPT V E D ++I+
Sbjct: 4622 RAKILVPFAASPAPKVTFSKGENKISPTDPRVKVEYSDFLATLTIE 4667
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 120 RNRIREPASAGKTPSVTFQVIPSEISPTQWAVYEEMEDLPEGISIK 257
R +I P +A P VTF ++ISPT V E D ++I+
Sbjct: 5151 RAKILVPFAASPAPKVTFSKGENKISPTDPRVKVEYSDFLATLTIE 5196
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 120 RNRIREPASAGKTPSVTFQVIPSEISPTQWAVYEEMEDLPEGISIK 257
R +I P +A P VTF ++ISPT V E D ++I+
Sbjct: 4832 RAKILVPFAASPAPKVTFSKGENKISPTDPRVKVEYSDFLATLTIE 4877
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 120 RNRIREPASAGKTPSVTFQVIPSEISPTQWAVYEEMEDLPEGISIK 257
R +I P +A P VTF ++ISPT V E D ++I+
Sbjct: 4041 RAKILVPFAASPAPKVTFSKGENKISPTDPRVKVEYSDFLATLTIE 4086
>L14331-8|AAA28100.1| 586|Caenorhabditis elegans C.elegans homeobox
protein 26 protein.
Length = 586
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 6 TSNTDSDPTSESIEERSSGDKMANLDEVEQKSNKPERVRNRIREPASAGK 155
TSNT+S P+S S + S + M + + + + ++N E + AGK
Sbjct: 86 TSNTNSTPSSSSTSSKKSTEGMTETETMTASIEQEKVIQN---EESEAGK 132
>AF067608-15|AAO38679.1| 470|Caenorhabditis elegans Hypothetical
protein B0511.14b protein.
Length = 470
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 3 ETSNTDSDPTSESIEERSSGDKMANLDE---VEQKSNKPERV 119
E++ T+S+PTS + +RSS K+ DE + +S P +
Sbjct: 246 ESTETESEPTSSTRRQRSSPMKVVYEDEQPNIRSRSTSPPTI 287
>AF067608-14|AAK95864.1| 551|Caenorhabditis elegans Hypothetical
protein B0511.14a protein.
Length = 551
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 3 ETSNTDSDPTSESIEERSSGDKMANLDE---VEQKSNKPERV 119
E++ T+S+PTS + +RSS K+ DE + +S P +
Sbjct: 246 ESTETESEPTSSTRRQRSSPMKVVYEDEQPNIRSRSTSPPTI 287
>AF036702-14|AAB88378.2| 396|Caenorhabditis elegans Hypothetical
protein F33D4.6a protein.
Length = 396
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +3
Query: 12 NTDSDPTSESIEERSSGDKMANLDEVEQKSNKPER 116
N +DPT+ + + ++ ++EVEQ++ KP+R
Sbjct: 295 NLFTDPTTTTTPTTTEEPEVTTIEEVEQETIKPKR 329
>AF036702-13|AAB88379.2| 648|Caenorhabditis elegans Hypothetical
protein F33D4.6b protein.
Length = 648
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +3
Query: 12 NTDSDPTSESIEERSSGDKMANLDEVEQKSNKPER 116
N +DPT+ + + ++ ++EVEQ++ KP+R
Sbjct: 295 NLFTDPTTTTTPTTTEEPEVTTIEEVEQETIKPKR 329
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,784,163
Number of Sequences: 27780
Number of extensions: 426341
Number of successful extensions: 1146
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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