Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30351
         (809 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    25   2.8  
AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A prot...    25   3.7  
AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A prot...    25   3.7  
AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A prot...    25   3.7  
AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A prot...    25   3.7  
AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A prot...    25   3.7  
AJ970247-1|CAI96719.1|  132|Anopheles gambiae putative reverse t...    24   6.4  
AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse t...    24   6.4  
AJ970248-1|CAI96720.1|  132|Anopheles gambiae putative reverse t...    23   8.4  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   8.4  

>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = +1

Query: 382 K*FLRSRLPIISKWSQTRTSTSSKRPPRT--AQTSPLTAPCTKDR*EQAASP 531
           K FL SRL +  K  Q  T+ +   PP     Q  P+  P   +   QA+ P
Sbjct: 605 KQFLLSRLSLFIKQQQDNTANNVIPPPSAYQQQQPPVVPPPRTNSQSQASEP 656


>AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 308 GTSPQTEPAPQATPH 352
           G +P TEPAP+ +P+
Sbjct: 80  GVTPNTEPAPKPSPN 94


>AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 308 GTSPQTEPAPQATPH 352
           G +P TEPAP+ +P+
Sbjct: 80  GVTPNTEPAPKPSPN 94


>AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 308 GTSPQTEPAPQATPH 352
           G +P TEPAP+ +P+
Sbjct: 80  GVTPNTEPAPKPSPN 94


>AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 308 GTSPQTEPAPQATPH 352
           G +P TEPAP+ +P+
Sbjct: 80  GVTPNTEPAPKPSPN 94


>AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 308 GTSPQTEPAPQATPH 352
           G +P TEPAP+ +P+
Sbjct: 80  GVTPNTEPAPKPSPN 94


>AJ970247-1|CAI96719.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 116 WILQYLMSRVMSPRMQPASDKTM 184
           W+  YLM R  S RM P   +++
Sbjct: 100 WLRSYLMGRTYSVRMGPHLSRSL 122


>AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 116 WILQYLMSRVMSPRMQPASDKTMHHF 193
           W+  YLM R  S RM P   +++  F
Sbjct: 100 WLRSYLMGRTYSVRMGPHLSRSIPCF 125


>AJ970248-1|CAI96720.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 116 WILQYLMSRVMSPRMQP 166
           W+  YLM R  S RM P
Sbjct: 100 WLRSYLMGRTYSVRMGP 116


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 719 PETRGNFEPFPLPTPKN 669
           P+TR     +PLP P+N
Sbjct: 53  PQTRARSNTWPLPRPEN 69


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 923,594
Number of Sequences: 2352
Number of extensions: 20086
Number of successful extensions: 77
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 77
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)