Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30351
(809 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 31 0.74
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 31 0.74
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 31 0.74
U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical p... 31 1.3
U53151-3|AAB37067.2| 388|Caenorhabditis elegans Serpentine rece... 31 1.3
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 30 1.7
AF016420-7|AAB65303.1| 428|Caenorhabditis elegans Serpentine re... 30 2.3
Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr... 29 3.0
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein. 29 3.0
U80023-13|AAG24043.2| 348|Caenorhabditis elegans Hypothetical p... 29 3.9
U80023-12|AAY86287.1| 564|Caenorhabditis elegans Hypothetical p... 29 3.9
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 3.9
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 29 5.2
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 29 5.2
Z32683-13|CAA83630.1| 386|Caenorhabditis elegans Hypothetical p... 29 5.2
AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical ... 29 5.2
AF016441-6|AAX55687.1| 440|Caenorhabditis elegans Paps (adenosi... 28 6.9
AF016441-5|AAX55688.1| 408|Caenorhabditis elegans Paps (adenosi... 28 6.9
AF016441-4|AAX55686.1| 425|Caenorhabditis elegans Paps (adenosi... 28 6.9
Z83236-2|CAB05778.1| 337|Caenorhabditis elegans Hypothetical pr... 28 9.1
U40942-2|AAC47072.2| 201|Caenorhabditis elegans Hypothetical pr... 28 9.1
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 28 9.1
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 28 9.1
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 28 9.1
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 28 9.1
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 28 9.1
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 800 APAVWPRPNGPPKACSSNSEKIGRPPGPETRGNFEPFPLPTP 675
AP+ P P+GPP N + +P GP + G +P P P
Sbjct: 94 APSDEPSPSGPPSPGPVNPSEDPQPSGPPSPGPVDPSEDPQP 135
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -1
Query: 797 PAVWPRPNGPPKACSSNSEKIGRPPGPETRGNFEPFPLPTP 675
P+ P+P+GPP + + +P G + G +P P+P
Sbjct: 166 PSEDPQPSGPPSPGPVDPSEDPQPSGSSSPGPVDPSDEPSP 206
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 31.5 bits (68), Expect = 0.74
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 391 LRSRLPIISKWSQTRTSTSSKRPPRTAQTSPLTAPCTKDR*EQAAS-PQRGRRASRQRHH 567
LR L + S +S TS S+ + P + + A+ PQ+ + S + HH
Sbjct: 1878 LRGNLSVASSFSSEGTSKSAVDSTYAPSSIPKSLSSASIARQSASPIPQQSSQRSAKSHH 1937
Query: 568 HQKD 579
HQKD
Sbjct: 1938 HQKD 1941
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 31.5 bits (68), Expect = 0.74
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 391 LRSRLPIISKWSQTRTSTSSKRPPRTAQTSPLTAPCTKDR*EQAAS-PQRGRRASRQRHH 567
LR L + S +S TS S+ + P + + A+ PQ+ + S + HH
Sbjct: 699 LRGNLSVASSFSSEGTSKSAVDSTYAPSSIPKSLSSASIARQSASPIPQQSSQRSAKSHH 758
Query: 568 HQKD 579
HQKD
Sbjct: 759 HQKD 762
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 31.5 bits (68), Expect = 0.74
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 391 LRSRLPIISKWSQTRTSTSSKRPPRTAQTSPLTAPCTKDR*EQAAS-PQRGRRASRQRHH 567
LR L + S +S TS S+ + P + + A+ PQ+ + S + HH
Sbjct: 1878 LRGNLSVASSFSSEGTSKSAVDSTYAPSSIPKSLSSASIARQSASPIPQQSSQRSAKSHH 1937
Query: 568 HQKD 579
HQKD
Sbjct: 1938 HQKD 1941
>U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical
protein F45F2.1 protein.
Length = 475
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2
Query: 427 GSTLKLLAICSLGIISLITMTAFLGVRSRLRCWFCLRRRSLFVTF 293
G T K I S+G I L ++ FL +R W C+ R L++ F
Sbjct: 5 GPTFK--TIFSIGAIVLWSIELFLAFAQSVRPWICILRTCLYIIF 47
>U53151-3|AAB37067.2| 388|Caenorhabditis elegans Serpentine
receptor, class r protein9 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = -3
Query: 303 LSLSSLPVVYFSSTKAV-FLGASQFLFFDSLHTIRVKLKWCIVLSDAGCILGDITRLIRY 127
+ +S+LPV F K+ LG + SL K K C + + C++G I +I +
Sbjct: 2 VKMSNLPVFSFDDDKSSELLGPFRHFLKVSLLDCSAKTKCCSIFT---CLVGVIIVIITF 58
Query: 126 CRIHLEVEMIGGP 88
RI + ++ G P
Sbjct: 59 MRISVLMQTAGAP 71
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 421 WSQTRTSTSSKRPPRTAQTSPLTAPCTKDR*EQAASPQRGRRASRQRHHHQKDQE 585
WS++R+ + S+ PPR S T+DR S R R SR R + ++
Sbjct: 400 WSRSRSRSRSRSPPRRRSRS---RSRTRDRRRPRRSNSRRRSRSRDRQRRSRSRD 451
>AF016420-7|AAB65303.1| 428|Caenorhabditis elegans Serpentine
receptor, class r protein8 protein.
Length = 428
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = -3
Query: 276 YFSSTKAVFLGASQFLFFDSLHTIRVKLKWCIVLSDAGCILGDITRLIRYCRIHLEVEMI 97
+ T + LG +FL SL K K C V + C+LG + ++ RI +E +
Sbjct: 52 FSDDTPSDLLGPFRFLVKASLLDCSTKSKCCSVFT---CLLGVVMVVVTLIRISFLMEAV 108
Query: 96 GGP 88
G P
Sbjct: 109 GAP 111
>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical protein
C10C5.6b protein.
Length = 1782
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 95 PIISTSRWILQYLMSRVMS--PRMQPASDKTMHHFSLTRMVWRESKKRNWLAPRKTAFVD 268
PI +R + Q ++ RV + P MQ D TM H S +M+ R++ K PRK
Sbjct: 1022 PIERVAR-MAQKIVHRVEAGMPEMQANIDNTMAHLS-RKMIARKNSKATVEMPRKPVGPS 1079
Query: 269 EK*TTGSE 292
E+ +T SE
Sbjct: 1080 EEVSTLSE 1087
>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical protein
C10C5.6a protein.
Length = 1776
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 95 PIISTSRWILQYLMSRVMS--PRMQPASDKTMHHFSLTRMVWRESKKRNWLAPRKTAFVD 268
PI +R + Q ++ RV + P MQ D TM H S +M+ R++ K PRK
Sbjct: 1022 PIERVAR-MAQKIVHRVEAGMPEMQANIDNTMAHLS-RKMIARKNSKATVEMPRKPVGPS 1079
Query: 269 EK*TTGSE 292
E+ +T SE
Sbjct: 1080 EEVSTLSE 1087
>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical protein
C10C5.6b protein.
Length = 1782
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 95 PIISTSRWILQYLMSRVMS--PRMQPASDKTMHHFSLTRMVWRESKKRNWLAPRKTAFVD 268
PI +R + Q ++ RV + P MQ D TM H S +M+ R++ K PRK
Sbjct: 1022 PIERVAR-MAQKIVHRVEAGMPEMQANIDNTMAHLS-RKMIARKNSKATVEMPRKPVGPS 1079
Query: 269 EK*TTGSE 292
E+ +T SE
Sbjct: 1080 EEVSTLSE 1087
>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical protein
C10C5.6a protein.
Length = 1776
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 95 PIISTSRWILQYLMSRVMS--PRMQPASDKTMHHFSLTRMVWRESKKRNWLAPRKTAFVD 268
PI +R + Q ++ RV + P MQ D TM H S +M+ R++ K PRK
Sbjct: 1022 PIERVAR-MAQKIVHRVEAGMPEMQANIDNTMAHLS-RKMIARKNSKATVEMPRKPVGPS 1079
Query: 269 EK*TTGSE 292
E+ +T SE
Sbjct: 1080 EEVSTLSE 1087
>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
Length = 1800
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 95 PIISTSRWILQYLMSRVMS--PRMQPASDKTMHHFSLTRMVWRESKKRNWLAPRKTAFVD 268
PI +R + Q ++ RV + P MQ D TM H S +M+ R++ K PRK
Sbjct: 1046 PIERVAR-MAQKIVHRVEAGMPEMQANIDNTMAHLS-RKMIARKNSKATVEMPRKPVGPS 1103
Query: 269 EK*TTGSE 292
E+ +T SE
Sbjct: 1104 EEVSTLSE 1111
>U80023-13|AAG24043.2| 348|Caenorhabditis elegans Hypothetical
protein F07C4.12a protein.
Length = 348
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 752 SNSEKIGRPPGPETRGNFEPFPLPTPKNSF 663
+N K G P G E G++EP+ L P+ F
Sbjct: 280 TNFAKYGNPNGNEGAGSWEPYTLVNPERHF 309
>U80023-12|AAY86287.1| 564|Caenorhabditis elegans Hypothetical
protein F07C4.12b protein.
Length = 564
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 752 SNSEKIGRPPGPETRGNFEPFPLPTPKNSF 663
+N K G P G E G++EP+ L P+ F
Sbjct: 496 TNFAKYGNPNGNEGAGSWEPYTLVNPERHF 525
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -1
Query: 785 PRPNGPPKACSSNSEKIGRPPGPETRGNFEPFPLPTPKNSFV*SEG 648
P P G P+ S+ R P P +G P P PT + + EG
Sbjct: 76 PPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTGEPQDLSGEG 121
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -1
Query: 785 PRPNGPPKACSSNSEKIGRPPGPETRGNFEPFPLPTPKNSFV*SEG 648
P P G P+ S RPP P +G P P PT + + +EG
Sbjct: 139 PPPTGEPQDLSGEGNASRRPP-PPPKGTGSPPPPPTGEPQDLSTEG 183
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 785 PRPNGPPKACSSNSEKIGRPPGPETRGNFEPFPLPTPKNSFV*SEG 648
P P G P+ S+ RPP P +G P P PT + + +EG
Sbjct: 170 PPPTGEPQDLSTEGNASRRPP-PPPKGTGTPPPPPTGEPQDLSAEG 214
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -1
Query: 785 PRPNGPPKACSSNSEKIGRPPGPETRGNFEPFPLPTPKNSFV*SEG 648
P P G P+ S+ RPP P +G P P PT + + EG
Sbjct: 201 PPPTGEPQDLSAEGYASRRPP-PPPKGTGSPTPPPTGEPQDLSGEG 245
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = -1
Query: 785 PRPNGPPKACSSNSEKIGRPPGPETRGNFEPFPLPTPKNSFV*SEG 648
P P G P+ S RPP P +G P P PT + + EG
Sbjct: 108 PPPTGEPQDLSGEGNASRRPP-PPPKGTGSPPPPPTGEPQDLSGEG 152
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = -1
Query: 785 PRPNGPPKACSSNSEKIGRPPGPETRGNFEPFPLPTPKNSFV*SEG 648
P P G P+ S RPP P +G P P PT + + EG
Sbjct: 232 PPPTGEPQDLSGEGNASRRPP-PPPKGTGSPPPPPTGEPQDLSGEG 276
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 269 EK*TTGSEESDKQGTSPQTEPAPQATPHAQECSHGDQRNDS 391
EK + S++S P +P P+ATP Q D +DS
Sbjct: 458 EKAASSSDDSSDDEKKPTAKPTPKATP-KQSAKKADSSDDS 497
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 269 EK*TTGSEESDKQGTSPQTEPAPQATPHAQECSHGDQRNDS 391
EK + S++S P +P P+ATP Q D +DS
Sbjct: 733 EKAASSSDDSSDDEKKPTAKPTPKATP-KQSAKKADSSDDS 772
>Z32683-13|CAA83630.1| 386|Caenorhabditis elegans Hypothetical
protein R07E5.10a protein.
Length = 386
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +1
Query: 34 EKKSHISHLVMAFLQHKGRAANHFNLEMDSAVSDEPRDVAED 159
EKK+ I ++KG+ A+ ++D A +++P+D+ D
Sbjct: 245 EKKARIREFEKFVKENKGKNADMTKEDLDEATAEQPKDIDFD 286
>AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical
protein Y43D4A.5 protein.
Length = 1648
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -1
Query: 776 NGPPKACSSNSEKIGRPPGPETR--GNFEPFPLPT 678
+ P S + E +G PPGP+TR G +P P PT
Sbjct: 894 HAPADFGSGSVEPLGSPPGPQTRPIGTGQPLP-PT 927
>AF016441-6|AAX55687.1| 440|Caenorhabditis elegans Paps (adenosine
3'-phosphate 5'-phosphosulfate) transporter protein 1,
isoform b protein.
Length = 440
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 442 CLFGFGSTLKLLAICSLGIISLITMTAFLGV 350
C FG++L LL+ S G S IT T+F G+
Sbjct: 256 CTIAFGASLFLLSSSSKGAGSTITYTSFSGM 286
>AF016441-5|AAX55688.1| 408|Caenorhabditis elegans Paps (adenosine
3'-phosphate 5'-phosphosulfate) transporter protein 1,
isoform c protein.
Length = 408
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 442 CLFGFGSTLKLLAICSLGIISLITMTAFLGV 350
C FG++L LL+ S G S IT T+F G+
Sbjct: 256 CTIAFGASLFLLSSSSKGAGSTITYTSFSGM 286
>AF016441-4|AAX55686.1| 425|Caenorhabditis elegans Paps (adenosine
3'-phosphate 5'-phosphosulfate) transporter protein 1,
isoform a protein.
Length = 425
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 442 CLFGFGSTLKLLAICSLGIISLITMTAFLGV 350
C FG++L LL+ S G S IT T+F G+
Sbjct: 241 CTIAFGASLFLLSSSSKGAGSTITYTSFSGM 271
>Z83236-2|CAB05778.1| 337|Caenorhabditis elegans Hypothetical
protein K10H10.2 protein.
Length = 337
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 375 INEMIPKEQIANNFKVEPNPNKHFKQTTP 461
+ ++IP I N F NP H+K T P
Sbjct: 136 LRDVIPNAYILNQFGNPANPEAHYKTTGP 164
>U40942-2|AAC47072.2| 201|Caenorhabditis elegans Hypothetical
protein K02E10.6 protein.
Length = 201
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 366 VMVINEMIPKEQIANNFKVEPNPNKHFKQTTPTYCADLTIDG 491
V++ ++ P+E N K EP P +F Q T + A DG
Sbjct: 8 VLLTVQVCPEENWLPNRKEEPRPVSYFSQRTRSLNAGYATDG 49
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 351 TPKNAVMVINEMIPKEQIANNFKVEPNPNKHFKQTTP 461
TPK V E +PKE I ++ K + +P+ K+ +P
Sbjct: 1350 TPKRRVSFAEEELPKEVIDSDRKKKKSPSPDKKEKSP 1386
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 351 TPKNAVMVINEMIPKEQIANNFKVEPNPNKHFKQTTP 461
TPK V E +PKE I ++ K + +P+ K+ +P
Sbjct: 1350 TPKRRVSFAEEELPKEVIDSDRKKKKSPSPDKKEKSP 1386
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 351 TPKNAVMVINEMIPKEQIANNFKVEPNPNKHFKQTTP 461
TPK V E +PKE I ++ K + +P+ K+ +P
Sbjct: 1350 TPKRRVSFAEEELPKEVIDSDRKKKKSPSPDKKEKSP 1386
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 351 TPKNAVMVINEMIPKEQIANNFKVEPNPNKHFKQTTP 461
TPK V E +PKE I ++ K + +P+ K+ +P
Sbjct: 1350 TPKRRVSFAEEELPKEVIDSDRKKKKSPSPDKKEKSP 1386
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 27.9 bits (59), Expect = 9.1
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +1
Query: 397 SRLPIISKWSQTRTSTS-SKRPPRTAQTSPLTAPCTKDR*EQAASPQRGRRASRQR 561
SR P+ S R S S+ PP Q + P K R +Q+ S RR RQR
Sbjct: 124 SRSPVRRSRSPPRRQVSRSRSPPPRRQQRSRSPPPAKRRRDQSRSKSPPRRNYRQR 179
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,377,980
Number of Sequences: 27780
Number of extensions: 477837
Number of successful extensions: 1906
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1871
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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