Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30350
(884 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55653| Best HMM Match : No HMM Matches (HMM E-Value=.) 151 7e-37
SB_42081| Best HMM Match : ATP-synt_ab (HMM E-Value=8.3e-07) 144 6e-35
SB_49893| Best HMM Match : ATP-synt_ab (HMM E-Value=0) 114 1e-25
SB_21210| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_35533| Best HMM Match : Ldl_recept_b (HMM E-Value=9.8e-05) 33 0.41
SB_57037| Best HMM Match : RVT_1 (HMM E-Value=3.4e-15) 32 0.54
SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 32 0.54
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 32 0.54
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 32 0.54
SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015) 32 0.54
SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0) 32 0.54
SB_56220| Best HMM Match : RVT_1 (HMM E-Value=3.7e-16) 32 0.71
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.71
SB_50676| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36) 31 1.6
SB_280| Best HMM Match : MFS_1 (HMM E-Value=0.005) 30 2.9
SB_21412| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_23156| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_1562| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032) 29 6.6
SB_53720| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_44111| Best HMM Match : OAD_gamma (HMM E-Value=4.4) 29 6.6
SB_38027| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_40914| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_12274| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_6548| Best HMM Match : Helicase_C (HMM E-Value=0.003) 28 8.7
>SB_55653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 151 bits (366), Expect = 7e-37
Identities = 72/75 (96%), Positives = 73/75 (97%)
Frame = +3
Query: 30 YPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLE 209
YPGDVFYLHSRLLERAAKM+D GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLE
Sbjct: 243 YPGDVFYLHSRLLERAAKMNDSNGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLE 302
Query: 210 TELFYKGIRPAINVG 254
TELFYKGIRPAINVG
Sbjct: 303 TELFYKGIRPAINVG 317
Score = 35.5 bits (78), Expect = 0.058
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 254 LSVSRVGSAAQTKAMKQVA 310
LSVSRVGSAAQTKAMKQ +
Sbjct: 318 LSVSRVGSAAQTKAMKQTS 336
>SB_42081| Best HMM Match : ATP-synt_ab (HMM E-Value=8.3e-07)
Length = 99
Score = 144 bits (350), Expect = 6e-35
Identities = 67/75 (89%), Positives = 72/75 (96%)
Frame = +3
Query: 30 YPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLE 209
YPGDVFYLHSRLLERAAK+SD +G GSLTALP+IETQAGDVSAYIPTNVISITDGQIFL+
Sbjct: 5 YPGDVFYLHSRLLERAAKLSDALGAGSLTALPIIETQAGDVSAYIPTNVISITDGQIFLD 64
Query: 210 TELFYKGIRPAINVG 254
+ELFY GIRPAINVG
Sbjct: 65 SELFYNGIRPAINVG 79
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2
Query: 254 LSVSRVGSAAQTKAMKQVA 310
LSVSRVGSAAQ MK++A
Sbjct: 80 LSVSRVGSAAQVAMMKKLA 98
>SB_49893| Best HMM Match : ATP-synt_ab (HMM E-Value=0)
Length = 313
Score = 114 bits (274), Expect = 1e-25
Identities = 58/86 (67%), Positives = 69/86 (80%), Gaps = 11/86 (12%)
Frame = +3
Query: 30 YPGDVFYLHSRLLERAAKMSDKM------GG-----GSLTALPVIETQAGDVSAYIPTNV 176
YPGDVFYLHSRLLERA+++S++ G GSLTALP+IETQAGDVSA++PTNV
Sbjct: 86 YPGDVFYLHSRLLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNV 145
Query: 177 ISITDGQIFLETELFYKGIRPAINVG 254
ISITDGQIFLE+ +F GIRPA+N G
Sbjct: 146 ISITDGQIFLESAMFNSGIRPAVNAG 171
Score = 101 bits (242), Expect = 8e-22
Identities = 48/85 (56%), Positives = 63/85 (74%)
Frame = +2
Query: 254 LSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELL 433
+SVSRVG AAQTK +K+++G ++ LAQYRE+AAFAQF SDLD AT++ L G R+TEL+
Sbjct: 172 ISVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFAQFASDLDEATRKQLEHGQRVTELM 231
Query: 434 KQGQYVPMAIEEQVAIIYCGVRGHL 508
KQ QY PM+I + +Y RG L
Sbjct: 232 KQKQYAPMSIADMSVSLYAAERGFL 256
>SB_21210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/75 (32%), Positives = 44/75 (58%)
Frame = +3
Query: 27 GYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL 206
G+PG ++ + + ERA ++ + GS+T +P++ D++ IP IT+GQI++
Sbjct: 240 GFPGYMYTDLATVYERAGRVEGR--NGSITQIPILTMPNDDITHPIPDLTGYITEGQIYV 297
Query: 207 ETELFYKGIRPAINV 251
+ +L + I P INV
Sbjct: 298 DRQLHNRQIYPPINV 312
>SB_35533| Best HMM Match : Ldl_recept_b (HMM E-Value=9.8e-05)
Length = 909
Score = 32.7 bits (71), Expect = 0.41
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 181 PSLMDRSSWKLSCSTKVSDQPSTSVVCIACRICCSDQG 294
P L D SW+L + K S +V C C + C D+G
Sbjct: 732 PKLRDAKSWRLYGTNKTSVCRDVTVTCRDCAVPCRDRG 769
>SB_57037| Best HMM Match : RVT_1 (HMM E-Value=3.4e-15)
Length = 291
Score = 32.3 bits (70), Expect = 0.54
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = -2
Query: 529 FWRGPACEVTADTAVNDGDLFLNSHGHILSLLEELSK-----THSSVEQ-LLCSGIQVRT 368
F G +CE AV+D LN HG + LL + K +HS ++Q L GI +T
Sbjct: 26 FRAGFSCETQLILAVHDWASILNKHGQVDVLLLDFQKAFDKVSHSKLQQKLKLYGISGKT 85
Query: 367 ELGKSCDLTVLSQF 326
S LT SQF
Sbjct: 86 LSWLSAFLTNRSQF 99
>SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 209
Score = 32.3 bits (70), Expect = 0.54
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = -2
Query: 529 FWRGPACEVTADTAVNDGDLFLNSHGHILSLLEELSK-----THSSVEQ-LLCSGIQVRT 368
F G +CE AV+D LN HG + LL + K +HS ++Q L GI +T
Sbjct: 126 FRAGFSCETQLILAVHDWASILNKHGQVDVLLLDFQKAFDKVSHSKLQQKLKLYGISGKT 185
Query: 367 ELGKSCDLTVLSQF 326
S LT SQF
Sbjct: 186 LSWLSAFLTNRSQF 199
>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 522
Score = 32.3 bits (70), Expect = 0.54
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = -2
Query: 529 FWRGPACEVTADTAVNDGDLFLNSHGHILSLLEELSK-----THSSVEQ-LLCSGIQVRT 368
F G +CE AV+D LN HG + LL + K +HS ++Q L GI +T
Sbjct: 126 FRAGFSCETQLILAVHDWASILNKHGQVDVLLLDFQKAFDKVSHSKLQQKLKLYGISGKT 185
Query: 367 ELGKSCDLTVLSQF 326
S LT SQF
Sbjct: 186 LSWLSAFLTNRSQF 199
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 32.3 bits (70), Expect = 0.54
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = -2
Query: 529 FWRGPACEVTADTAVNDGDLFLNSHGHILSLLEELSK-----THSSVEQ-LLCSGIQVRT 368
F G +CE AV+D LN HG + LL + K +HS ++Q L GI +T
Sbjct: 496 FRAGFSCETQLILAVHDWASILNKHGQVDVLLLDFQKAFDKVSHSKLQQKLKLYGISGKT 555
Query: 367 ELGKSCDLTVLSQF 326
S LT SQF
Sbjct: 556 LSWLSAFLTNRSQF 569
>SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015)
Length = 224
Score = 32.3 bits (70), Expect = 0.54
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = -2
Query: 529 FWRGPACEVTADTAVNDGDLFLNSHGHILSLLEELSK-----THSSVEQ-LLCSGIQVRT 368
F G +CE AV+D LN HG + LL + K +HS ++Q L GI +T
Sbjct: 76 FRAGFSCETQLILAVHDWASILNKHGQVDVLLLDFQKAFDKVSHSKLQQKLKLYGISGKT 135
Query: 367 ELGKSCDLTVLSQF 326
S LT SQF
Sbjct: 136 LSWLSAFLTNRSQF 149
>SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1176
Score = 32.3 bits (70), Expect = 0.54
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = -2
Query: 529 FWRGPACEVTADTAVNDGDLFLNSHGHILSLLEELSK-----THSSVEQ-LLCSGIQVRT 368
F G +CE AV+D LN HG + LL + K +HS ++Q L GI +T
Sbjct: 832 FRAGFSCETQLILAVHDWASILNKHGQVDVLLLDFQKAFDKVSHSKLQQKLKLYGISGKT 891
Query: 367 ELGKSCDLTVLSQF 326
S LT SQF
Sbjct: 892 LSWLSAFLTNRSQF 905
>SB_56220| Best HMM Match : RVT_1 (HMM E-Value=3.7e-16)
Length = 453
Score = 31.9 bits (69), Expect = 0.71
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Frame = -2
Query: 556 E*IPSRRQ*FWRGPACEVTADTAVNDGDLFLNSHGHILSLLEELSK-----THSSVEQ-L 395
E +P +Q G +CE AV+D LN HG + LL + K +HS ++Q L
Sbjct: 51 EEVPDHQQ---AGFSCETQLILAVHDWASILNKHGQVDVLLLDFQKAFDKVSHSKLQQKL 107
Query: 394 LCSGIQVRTELGKSCDLTVLSQF 326
GI +T S LT SQF
Sbjct: 108 KLYGISGKTLSWLSAFLTNRSQF 130
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 31.9 bits (69), Expect = 0.71
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = -2
Query: 529 FWRGPACEVTADTAVNDGDLFLNSHGHILSLLEELSK-----THSSVEQ-LLCSGIQVRT 368
F G +CE AV+D LN HG + LL + K +HS ++Q L GI +T
Sbjct: 748 FRAGFSCETQLILAVHDWASILNKHGQVDVLLLDFQKAFDKVSHSKLQQKLKLYGISGKT 807
Query: 367 ELGKSCDLTVLSQF 326
S LT SQF
Sbjct: 808 LSWLSALLTNRSQF 821
>SB_50676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 838
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Frame = -2
Query: 514 ACEVTADTAVNDGDLFLNSHGHILSLLEELSK-----THSSVEQ-LLCSGIQVRTELGKS 353
+CE AV+D LN HG + LL + K +HS ++Q L GI +T S
Sbjct: 667 SCETQLILAVHDWASILNKHGQVDVLLLDFQKAFDKVSHSKLQQKLKLYGISGKTLSWLS 726
Query: 352 CDLTVLSQF 326
LT SQF
Sbjct: 727 AFLTNRSQF 735
>SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36)
Length = 1677
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Frame = -2
Query: 514 ACEVTADTAVNDGDLFLNSHGHILSLLEELSK-----THSSVEQ-LLCSGIQVRTELGKS 353
+CE AV+D LN HG + LL + K +HS ++Q L GI +T S
Sbjct: 1257 SCETQLILAVHDWASILNKHGQVDVLLLDFQKAFDKVSHSKLQQKLKLYGISGKTLSWLS 1316
Query: 352 CDLTVLSQF 326
LT SQF
Sbjct: 1317 AFLTNRSQF 1325
>SB_280| Best HMM Match : MFS_1 (HMM E-Value=0.005)
Length = 480
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 452 PMAIEEQVAIIYCGVRGHLTSWTPPKSLPS 541
PMA E+V + CG+R H S T K +PS
Sbjct: 449 PMAQSEEVCVSPCGLREHEASDTVTKIIPS 478
>SB_21412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1015
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = -1
Query: 380 PSQNRTGQKLRPHGTEPIPVSWNRPPAS*PWS---EQQIRHAIQTTDVDGWSD 231
P+Q R+GQ R G P+P S +RP S P S +Q A+ +D +SD
Sbjct: 953 PAQ-RSGQGKRDQGNAPVPASRSRPVPS-PRSTLTQQSQPSAVTAFSIDDYSD 1003
>SB_23156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 452 PMAIEEQVAIIYCGVRGHLTSWTPP-KSLPSRRNLLNTSKLATRVCSPRSPKTVRSPPS 625
P +++ G+R L S TPP ++ R L S+ +R +P +P T S S
Sbjct: 154 PAGSSSSISLASPGMRSSLGSLTPPSRTSTPRSRLTPRSRSRSRTITPSTPSTTSSRAS 212
>SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1994
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 509 TSWTPPKSLPSRRNLLNTSKLATRVCSPRSPKTVRSPPSLTPP 637
+S PP SLP ++ +TS + T +P S V +P S P
Sbjct: 1094 SSTLPPTSLPVAQSSTSTSTVKTAAVTPSSSTQVVAPTSTIQP 1136
>SB_1562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 738
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 383 HPSQNRTGQKLRPHGTEPIPVSWNRP 306
+P+ + +GQK G P PV+W RP
Sbjct: 479 NPAVSNSGQKSARKGLLPTPVNWGRP 504
>SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032)
Length = 1199
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = +1
Query: 466 GTGRHHLLRCPRSPHKLDPSKITAFEKEFTQHIKTSHQGLLSTIAKDGQITPESDASLKE 645
G R C R H+L + + F ++F +H+ T S + Q P S A +K+
Sbjct: 287 GLSRSVRKHCVRE-HQLFANVVREFREQFREHVST-----CSRAEQVPQYEPLSSAMVKK 340
Query: 646 DRHRLSSYFQPIAVKLVY 699
+S+++ I VK +Y
Sbjct: 341 VLSDISAHYPGIPVKKLY 358
>SB_53720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 110
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 616 TPESDASLKEDRHRLSSYFQPIAV 687
TP+ D ++ +RH+++SYF+ + V
Sbjct: 35 TPKRDVTITHERHQMTSYFRTMVV 58
>SB_44111| Best HMM Match : OAD_gamma (HMM E-Value=4.4)
Length = 305
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 422 TELLKQGQYVPMAIEEQVAIIYCGVRGHLTSWTPPKSL 535
T + Q P+A E Q++ + GV HL S PP SL
Sbjct: 189 TPAVNQRATDPLATEVQISTVSNGVSRHLNSRAPPISL 226
>SB_38027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 239 SHQRRLSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQ 364
S+ R++ +V A T MKQ G+ K E ++ RE+ + Q
Sbjct: 153 SNDRQIRQVKVAPAPNTSTMKQTYGNTKREASRPREITSQEQ 194
>SB_40914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 852 NTPHWKAKTTIRPMKSTCRLLQQYF 778
+ P W+ T+ KS+CRL YF
Sbjct: 30 SAPKWRLNTSTEQGKSSCRLCDDYF 54
>SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2529
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 529 FWRGPACEVTADTAVNDGDLFLNSHGHILSLLEELSKTHSSV 404
F G +CE A +D LNSHG + +++ + SK V
Sbjct: 1229 FRSGFSCETQLILATHDWGSTLNSHGQVDAIMLDFSKAFDKV 1270
>SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 788
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 529 FWRGPACEVTADTAVNDGDLFLNSHGHILSLLEELSKTHSSV 404
F G +CE A +D LNSHG + +++ + SK V
Sbjct: 213 FRSGFSCETQLILATHDWGSTLNSHGQVDAIMLDFSKAFDKV 254
>SB_12274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 529 FWRGPACEVTADTAVNDGDLFLNSHGHILSLLEELSKTHSSV 404
F G +CE A +D LNSHG + +++ + SK V
Sbjct: 181 FRSGFSCETQLILATHDWGSTLNSHGQVDAIMLDFSKAFDKV 222
>SB_6548| Best HMM Match : Helicase_C (HMM E-Value=0.003)
Length = 1063
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = -1
Query: 251 DVDGWSDTFV---EQLSFQEDLSISDGDHVGGNVS*HITG 141
D++G+ D + + + +D+ I DGD + G+ HI+G
Sbjct: 834 DIEGYDDDDINDGDDIEGDDDVDIDDGDDIEGDDDEHISG 873
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,508,751
Number of Sequences: 59808
Number of extensions: 642473
Number of successful extensions: 1864
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1858
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2526446612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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