Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30350
(884 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 164 9e-41
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 164 9e-41
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 164 9e-41
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 46 5e-05
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 44 1e-04
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z70036-5|CAO78725.1| 712|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z70036-4|CAO78724.1| 733|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z70036-3|CAA93876.1| 757|Caenorhabditis elegans Hypothetical pr... 29 3.3
U43316-1|AAC46993.1| 525|Caenorhabditis elegans transmembrane r... 29 5.8
U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical pr... 29 5.8
U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical pr... 29 5.8
U28928-1|AAA68334.3| 589|Caenorhabditis elegans Anchor cell fus... 29 5.8
EF205023-1|ABP04049.1| 589|Caenorhabditis elegans anchor cell f... 29 5.8
AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trn... 29 5.8
AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trn... 29 5.8
AC006736-2|AAF60493.1| 529|Caenorhabditis elegans Abnormal cell... 29 5.8
AC006736-1|AAF60492.1| 525|Caenorhabditis elegans Abnormal cell... 29 5.8
Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical p... 28 7.7
Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical p... 28 7.7
Z99281-37|CAJ44244.1| 740|Caenorhabditis elegans Hypothetical p... 28 7.7
Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical p... 28 7.7
Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical p... 28 7.7
Z22178-7|CAA80157.2| 288|Caenorhabditis elegans Hypothetical pr... 28 7.7
AY611485-1|AAT37524.1| 740|Caenorhabditis elegans epidermal gro... 28 7.7
AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal gro... 28 7.7
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 164 bits (398), Expect = 9e-41
Identities = 87/140 (62%), Positives = 100/140 (71%)
Frame = +2
Query: 254 LSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELL 433
LSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA+TQQLLNRG+RLTELL
Sbjct: 370 LSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELL 429
Query: 434 KQGQYVPMAIEEQVAIIYCGVRGHLTSWTPPKSLPSRRNLLNTSKLATRVCSPRSPKTVR 613
KQGQYVPM IEEQV +IY GV+G+L P + L + + + + +
Sbjct: 430 KQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQ 489
Query: 614 SPPSLTPP*KKIVTDFLATF 673
P K +V +FLATF
Sbjct: 490 ISPQTDAQLKDVVVNFLATF 509
Score = 150 bits (364), Expect = 1e-36
Identities = 70/75 (93%), Positives = 74/75 (98%)
Frame = +3
Query: 30 YPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLE 209
YPGDVFYLHSRLLERAAKM++ +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLE
Sbjct: 295 YPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLE 354
Query: 210 TELFYKGIRPAINVG 254
TELFYKG+RPAINVG
Sbjct: 355 TELFYKGVRPAINVG 369
Score = 62.5 bits (145), Expect = 4e-10
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = +1
Query: 511 KLDPSKITAFEKEFTQHIKTSHQGLLSTIAKDGQITPESDASLKEDRHRLSSYFQP 678
K+DPS IT FEKEF H+++S Q LL TI ++GQI+P++DA LK+ + F+P
Sbjct: 456 KVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATFKP 511
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 164 bits (398), Expect = 9e-41
Identities = 87/140 (62%), Positives = 100/140 (71%)
Frame = +2
Query: 254 LSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELL 433
LSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA+TQQLLNRG+RLTELL
Sbjct: 362 LSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELL 421
Query: 434 KQGQYVPMAIEEQVAIIYCGVRGHLTSWTPPKSLPSRRNLLNTSKLATRVCSPRSPKTVR 613
KQGQYVPM IEEQV +IY GV+G+L P + L + + + + +
Sbjct: 422 KQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQ 481
Query: 614 SPPSLTPP*KKIVTDFLATF 673
P K +V +FLATF
Sbjct: 482 ISPQTDAQLKDVVVNFLATF 501
Score = 150 bits (364), Expect = 1e-36
Identities = 70/75 (93%), Positives = 74/75 (98%)
Frame = +3
Query: 30 YPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLE 209
YPGDVFYLHSRLLERAAKM++ +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLE
Sbjct: 287 YPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLE 346
Query: 210 TELFYKGIRPAINVG 254
TELFYKG+RPAINVG
Sbjct: 347 TELFYKGVRPAINVG 361
Score = 62.5 bits (145), Expect = 4e-10
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = +1
Query: 511 KLDPSKITAFEKEFTQHIKTSHQGLLSTIAKDGQITPESDASLKEDRHRLSSYFQP 678
K+DPS IT FEKEF H+++S Q LL TI ++GQI+P++DA LK+ + F+P
Sbjct: 448 KVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATFKP 503
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 164 bits (398), Expect = 9e-41
Identities = 87/140 (62%), Positives = 100/140 (71%)
Frame = +2
Query: 254 LSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDAATQQLLNRGMRLTELL 433
LSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDA+TQQLLNRG+RLTELL
Sbjct: 397 LSVSRVGSAAQTKAMKQVAGSMKLELAQYREVAAFAQFGSDLDASTQQLLNRGVRLTELL 456
Query: 434 KQGQYVPMAIEEQVAIIYCGVRGHLTSWTPPKSLPSRRNLLNTSKLATRVCSPRSPKTVR 613
KQGQYVPM IEEQV +IY GV+G+L P + L + + + + +
Sbjct: 457 KQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQ 516
Query: 614 SPPSLTPP*KKIVTDFLATF 673
P K +V +FLATF
Sbjct: 517 ISPQTDAQLKDVVVNFLATF 536
Score = 150 bits (364), Expect = 1e-36
Identities = 70/75 (93%), Positives = 74/75 (98%)
Frame = +3
Query: 30 YPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLE 209
YPGDVFYLHSRLLERAAKM++ +GGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLE
Sbjct: 322 YPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLE 381
Query: 210 TELFYKGIRPAINVG 254
TELFYKG+RPAINVG
Sbjct: 382 TELFYKGVRPAINVG 396
Score = 62.5 bits (145), Expect = 4e-10
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = +1
Query: 511 KLDPSKITAFEKEFTQHIKTSHQGLLSTIAKDGQITPESDASLKEDRHRLSSYFQP 678
K+DPS IT FEKEF H+++S Q LL TI ++GQI+P++DA LK+ + F+P
Sbjct: 483 KVDPSAITKFEKEFLAHLRSSQQALLKTIREEGQISPQTDAQLKDVVVNFLATFKP 538
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 45.6 bits (103), Expect = 5e-05
Identities = 24/75 (32%), Positives = 44/75 (58%)
Frame = +3
Query: 27 GYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL 206
G+PG ++ + + ERA ++ + GS+T +P++ D++ IP IT+GQI++
Sbjct: 302 GFPGYMYTDLATIYERAGRVEGR--DGSITQIPILTMPNDDITHPIPDLTGYITEGQIYV 359
Query: 207 ETELFYKGIRPAINV 251
+ +L + I P INV
Sbjct: 360 DRQLHNRLIYPPINV 374
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/75 (30%), Positives = 44/75 (58%)
Frame = +3
Query: 27 GYPGDVFYLHSRLLERAAKMSDKMGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFL 206
G+PG ++ + + ERA ++ + G S+T +P++ D++ IP IT+GQI++
Sbjct: 314 GFPGYMYTDLATIYERAGRVKGREG--SITQIPILTMPNNDITHPIPDLTGYITEGQIYI 371
Query: 207 ETELFYKGIRPAINV 251
+ +L + I P I+V
Sbjct: 372 DKQLHKRLIYPPIDV 386
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 527 KSLPSRRNLLNTSKLATRVCSPRSPKTVRSPPSLTP 634
+ L N T R+C+P PKT PP+ TP
Sbjct: 1318 EGLGGNTNQFETLSECERICTPSGPKTPTLPPTPTP 1353
>Z70036-5|CAO78725.1| 712|Caenorhabditis elegans Hypothetical
protein T01B4.2c protein.
Length = 712
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +1
Query: 499 RSPHKLDPSKITAFEKEFTQHIKTSHQGLLSTIAKDGQITPESDA-SLKE--DRHRLSSY 669
RSP S IT E T+H K + L T++ DG ++ A SL + D +L S+
Sbjct: 602 RSPSGGALSVITEASDEDTRHFKKHRRPLAKTVSTDGTVSNHGSAESLDQVMDELQLESH 661
Query: 670 FQPIAVK 690
Q + K
Sbjct: 662 DQAVTPK 668
>Z70036-4|CAO78724.1| 733|Caenorhabditis elegans Hypothetical
protein T01B4.2b protein.
Length = 733
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +1
Query: 499 RSPHKLDPSKITAFEKEFTQHIKTSHQGLLSTIAKDGQITPESDA-SLKE--DRHRLSSY 669
RSP S IT E T+H K + L T++ DG ++ A SL + D +L S+
Sbjct: 623 RSPSGGALSVITEASDEDTRHFKKHRRPLAKTVSTDGTVSNHGSAESLDQVMDELQLESH 682
Query: 670 FQPIAVK 690
Q + K
Sbjct: 683 DQAVTPK 689
>Z70036-3|CAA93876.1| 757|Caenorhabditis elegans Hypothetical
protein T01B4.2a protein.
Length = 757
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +1
Query: 499 RSPHKLDPSKITAFEKEFTQHIKTSHQGLLSTIAKDGQITPESDA-SLKE--DRHRLSSY 669
RSP S IT E T+H K + L T++ DG ++ A SL + D +L S+
Sbjct: 647 RSPSGGALSVITEASDEDTRHFKKHRRPLAKTVSTDGTVSNHGSAESLDQVMDELQLESH 706
Query: 670 FQPIAVK 690
Q + K
Sbjct: 707 DQAVTPK 713
>U43316-1|AAC46993.1| 525|Caenorhabditis elegans transmembrane
receptor protein.
Length = 525
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 148 MCQ-LTFPPT*SPSLMDRSSWKLSCSTKVSDQPSTSVVC 261
MC L + T P+L+D SWK + + ++ +P SVVC
Sbjct: 33 MCNDLPYNLTSFPNLVDEESWKDASESILTYKPLLSVVC 71
>U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical
protein F10D7.5c protein.
Length = 437
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +2
Query: 500 GHLTSWTPPKSLPSRRNLLNTSKLATRVCSPRSPKT---VRSPPSLTPP 637
G + TPP P R +L +S +R+ + SP T + SPPS PP
Sbjct: 317 GEIIPSTPPPVAP--RAVLGSSSSTSRLPNRSSPATTTAMMSPPSFNPP 363
>U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical
protein F10D7.5a protein.
Length = 617
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +2
Query: 500 GHLTSWTPPKSLPSRRNLLNTSKLATRVCSPRSPKT---VRSPPSLTPP 637
G + TPP P R +L +S +R+ + SP T + SPPS PP
Sbjct: 497 GEIIPSTPPPVAP--RAVLGSSSSTSRLPNRSSPATTTAMMSPPSFNPP 543
>U28928-1|AAA68334.3| 589|Caenorhabditis elegans Anchor cell fusion
failure protein1 protein.
Length = 589
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 360 PSSVLTWMPLHSNCSTEECVLLSSSSKDNMCPWLL 464
P +W HS CS EC L S D + PW++
Sbjct: 489 PRQEQSWSKGHSPCSQAECNSLKSGVSD-LFPWIM 522
>EF205023-1|ABP04049.1| 589|Caenorhabditis elegans anchor cell
fusion failure-1 protein.
Length = 589
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 360 PSSVLTWMPLHSNCSTEECVLLSSSSKDNMCPWLL 464
P +W HS CS EC L S D + PW++
Sbjct: 489 PRQEQSWSKGHSPCSQAECNSLKSGVSD-LFPWIM 522
>AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform a protein.
Length = 909
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 454 GHILSLLEELSKTHSSVEQLLCSGIQVRTELGKSCDLTVL 335
G L L+EE K S V + LC + R+ + K +L L
Sbjct: 649 GKELKLMEEFGKLKSEVHEALCDSVDTRSVIEKFRELISL 688
>AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform b protein.
Length = 908
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 454 GHILSLLEELSKTHSSVEQLLCSGIQVRTELGKSCDLTVL 335
G L L+EE K S V + LC + R+ + K +L L
Sbjct: 648 GKELKLMEEFGKLKSEVHEALCDSVDTRSVIEKFRELISL 687
>AC006736-2|AAF60493.1| 529|Caenorhabditis elegans Abnormal cell
migration protein1, isoform b protein.
Length = 529
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 148 MCQ-LTFPPT*SPSLMDRSSWKLSCSTKVSDQPSTSVVC 261
MC L + T P+L+D SWK + + ++ +P SVVC
Sbjct: 33 MCNDLPYNLTSFPNLVDEESWKDASESILTYKPLLSVVC 71
>AC006736-1|AAF60492.1| 525|Caenorhabditis elegans Abnormal cell
migration protein1, isoform a protein.
Length = 525
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 148 MCQ-LTFPPT*SPSLMDRSSWKLSCSTKVSDQPSTSVVC 261
MC L + T P+L+D SWK + + ++ +P SVVC
Sbjct: 33 MCNDLPYNLTSFPNLVDEESWKDASESILTYKPLLSVVC 71
>Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical
protein Y57G11C.24e protein.
Length = 665
Score = 28.3 bits (60), Expect = 7.7
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 171 WWECKLTHHRLGF 133
WWECK H R+G+
Sbjct: 388 WWECKNMHQRVGY 400
>Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical
protein Y57G11C.24d protein.
Length = 845
Score = 28.3 bits (60), Expect = 7.7
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 171 WWECKLTHHRLGF 133
WWECK H R+G+
Sbjct: 568 WWECKNMHQRVGY 580
>Z99281-37|CAJ44244.1| 740|Caenorhabditis elegans Hypothetical
protein Y57G11C.24h protein.
Length = 740
Score = 28.3 bits (60), Expect = 7.7
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 171 WWECKLTHHRLGF 133
WWECK H R+G+
Sbjct: 665 WWECKNMHQRVGY 677
>Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical
protein Y57G11C.24a protein.
Length = 862
Score = 28.3 bits (60), Expect = 7.7
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 171 WWECKLTHHRLGF 133
WWECK H R+G+
Sbjct: 585 WWECKNMHQRVGY 597
>Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical
protein Y57G11C.24g protein.
Length = 917
Score = 28.3 bits (60), Expect = 7.7
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 171 WWECKLTHHRLGF 133
WWECK H R+G+
Sbjct: 640 WWECKNMHQRVGY 652
>Z22178-7|CAA80157.2| 288|Caenorhabditis elegans Hypothetical
protein F54C8.7a protein.
Length = 288
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +1
Query: 484 LLRCPRSPHKLDPSKITAFEKEFTQHIKTSHQGLLSTIAK-DGQITPESDASLK--EDRH 654
L +CPR +K+ +F+K K S Q LL + K D + PE +A + +D H
Sbjct: 29 LEKCPRIDTAQVAAKVESFKKWTIGTFKNSKQQLLEHMGKIDKTVDPEFEAQCEVLKDIH 88
Query: 655 R 657
R
Sbjct: 89 R 89
>AY611485-1|AAT37524.1| 740|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant B
protein.
Length = 740
Score = 28.3 bits (60), Expect = 7.7
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 171 WWECKLTHHRLGF 133
WWECK H R+G+
Sbjct: 665 WWECKNMHQRVGY 677
>AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant A
protein.
Length = 917
Score = 28.3 bits (60), Expect = 7.7
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 171 WWECKLTHHRLGF 133
WWECK H R+G+
Sbjct: 640 WWECKNMHQRVGY 652
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,498,764
Number of Sequences: 27780
Number of extensions: 467183
Number of successful extensions: 1342
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1342
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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