Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30349
         (908 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3128|AAF49173.1|  224|Drosophila melanogaster CG14089-P...    31   2.9  
AE013599-3816|AAF47165.3| 1669|Drosophila melanogaster CG4049-PA...    30   3.8  
AE014297-2229|AAF55331.1|  229|Drosophila melanogaster CG14888-P...    29   6.7  

>AE014296-3128|AAF49173.1|  224|Drosophila melanogaster CG14089-PA
           protein.
          Length = 224

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -3

Query: 903 PGTPGPPLKQGLRLPNSPTGSKPGTPSEEG 814
           PG PGPP + G +    P GSK G P E+G
Sbjct: 90  PGPPGPPGQPGQKGYPGPKGSK-GDPGEKG 118


>AE013599-3816|AAF47165.3| 1669|Drosophila melanogaster CG4049-PA
            protein.
          Length = 1669

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 14/21 (66%), Positives = 16/21 (76%), Gaps = 2/21 (9%)
 Frame = -3

Query: 858  NSPTG--SKPGTPSEEGLEPG 802
            N  TG  SKPG+PSEEG +PG
Sbjct: 1152 NKSTGDLSKPGSPSEEGSKPG 1172


>AE014297-2229|AAF55331.1|  229|Drosophila melanogaster CG14888-PA
           protein.
          Length = 229

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -3

Query: 903 PGTPGPPLKQGLRLPNSPTGSKPGTPSEEGLEPGK 799
           PG PGPP K+G R     +G K G P   G+   K
Sbjct: 32  PGPPGPPGKRGKRGKKGDSGEK-GDPGLNGISGEK 65


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,650,880
Number of Sequences: 53049
Number of extensions: 918646
Number of successful extensions: 2285
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2264
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)