Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30348
(873 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0426 + 33855701-33856135 33 0.30
12_02_0306 + 17307166-17309091 33 0.39
05_04_0112 + 18084490-18084915 32 0.52
12_02_0431 - 19000267-19000719 32 0.69
08_02_1012 + 23550314-23551504 32 0.69
09_02_0252 - 6315834-6315959,6316074-6317018 31 0.91
07_01_0294 + 2130956-2131087,2131495-2131950 31 0.91
01_07_0248 + 42261373-42261609,42261733-42261905,42261986-422620... 31 1.2
01_06_0146 + 26969011-26969995,26970878-26970930 31 1.2
06_03_0828 + 25137782-25138312,25141349-25141588 31 1.6
11_04_0097 + 13448740-13450725 30 2.1
01_07_0126 - 41222916-41222942,41223120-41223190,41223478-412235... 30 2.1
05_03_0458 + 14280953-14281866,14281964-14282912 30 2.8
04_03_0191 - 12452369-12452499,12452875-12453077,12453641-124538... 30 2.8
01_06_1816 + 40086972-40087820,40088324-40088459,40088544-400886... 29 3.7
09_06_0038 - 20415363-20415883,20415917-20416596,20416858-204169... 29 4.9
08_02_0703 - 20188489-20190246 29 4.9
06_03_1257 - 28790660-28790785,28791126-28791283,28791528-287916... 29 4.9
05_03_0343 + 12732673-12732792,12732903-12733091,12733220-127333... 29 4.9
03_05_0646 - 26385447-26385463,26385546-26385657,26385838-263859... 29 4.9
02_01_0213 + 1416721-1417440 29 4.9
09_06_0205 - 21567467-21567655,21567791-21567876,21567965-215680... 29 6.4
09_04_0005 + 13612060-13612291,13612381-13612510,13612726-136129... 29 6.4
06_03_1146 - 28004896-28005554,28005664-28005844 29 6.4
06_02_0152 - 12316242-12316248,12316634-12316800,12317689-123178... 29 6.4
04_04_1173 + 31469357-31469920 29 6.4
04_03_0672 + 18559984-18559986,18560096-18560569,18560666-185608... 29 6.4
03_05_0768 + 27575303-27575980,27576427-27576543 29 6.4
01_05_0199 - 19174971-19175105,19176302-19176628,19176813-191769... 29 6.4
07_03_1160 - 24430240-24431268 28 8.5
07_03_0476 - 18547223-18548187,18548743-18549958 28 8.5
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 28 8.5
02_05_1120 + 34257504-34258294,34258483-34258571,34258616-342587... 28 8.5
02_05_0932 - 32841331-32842242 28 8.5
02_03_0134 - 15596379-15597689 28 8.5
01_01_0242 + 1997427-1997429,1997893-1998580,2000199-2000234,200... 28 8.5
>03_06_0426 + 33855701-33856135
Length = 144
Score = 33.1 bits (72), Expect = 0.30
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -3
Query: 703 RIAISGLSFVINLSELGSQGHGARHRSGIRRNVGSRWGGGTWGERRSVLGHQP 545
RI L ++ L G + + + + VG GGG W RR GH+P
Sbjct: 82 RILSQELDVLVELDRAGGPARTDQATARMAQPVGGSGGGGAWRRRRRSRGHRP 134
>12_02_0306 + 17307166-17309091
Length = 641
Score = 32.7 bits (71), Expect = 0.39
Identities = 32/101 (31%), Positives = 38/101 (37%), Gaps = 2/101 (1%)
Frame = -3
Query: 646 GHGARH--RSGIRRNVGSRWGGGTWGERRSVLGHQPAALWGTRSRPXXXXXFVTSLSSGG 473
G GAR R G+ V G G S+ G L G +R L+ GG
Sbjct: 85 GGGARGGARDGVGVTVTGVGAGAGAGVGSSLTGDGGGTLCGGGARGGARDGVGVRLTGGG 144
Query: 472 IGPDAGTGVLVEVKAGGTLDLGGFTFDAVVEDVAHRGVGMG 350
G AG G + GGTL GG A D G G+G
Sbjct: 145 AGAGAGVGSSLAGVGGGTLCGGGARGGA--RDGGGAGAGVG 183
Score = 31.9 bits (69), Expect = 0.69
Identities = 32/101 (31%), Positives = 38/101 (37%), Gaps = 2/101 (1%)
Frame = -3
Query: 646 GHGARH--RSGIRRNVGSRWGGGTWGERRSVLGHQPAALWGTRSRPXXXXXFVTSLSSGG 473
G GAR R G+ V G G S+ G L G +R L+ GG
Sbjct: 236 GGGARGGARDGVGVTVTVVGAGAGAGVGSSLTGDGGGTLCGGGARGGARDGVGVRLTGGG 295
Query: 472 IGPDAGTGVLVEVKAGGTLDLGGFTFDAVVEDVAHRGVGMG 350
G AG G + GGTL GG A D G G+G
Sbjct: 296 AGAGAGVGSSLAGVGGGTLCGGGARGGA--RDGVGAGAGVG 334
>05_04_0112 + 18084490-18084915
Length = 141
Score = 32.3 bits (70), Expect = 0.52
Identities = 25/64 (39%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = -3
Query: 592 GGGTWGERRSVLGHQPAALWGTRSRPXXXXXFVTS-LSSGGIGPDA-GTGVLVEVKAG-G 422
GGG GE+ G AA T RP +++ GI PDA G LVE AG G
Sbjct: 12 GGGGVGEQLPAAGEDSAAATNTGKRPVVGSSLAAMVVAAAGIQPDAFALGGLVEYPAGNG 71
Query: 421 TLDL 410
DL
Sbjct: 72 ERDL 75
>12_02_0431 - 19000267-19000719
Length = 150
Score = 31.9 bits (69), Expect = 0.69
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
Frame = -2
Query: 392 CSCRRCC----TQRGRDGQRIHCGGD--IVSWAWGAG 300
C C C +RG DG+ + CGGD +VS+ GAG
Sbjct: 96 CCCVSACGGRRRRRGSDGEEVCCGGDGPVVSYRGGAG 132
>08_02_1012 + 23550314-23551504
Length = 396
Score = 31.9 bits (69), Expect = 0.69
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Frame = +3
Query: 261 TSPST*TAAIGLNSSPPSPTHNVPAAMDSLPI---PTPLCATSSTTAXXXXXXXXXXXXA 431
TS S+ +++ +SS SPT PAA+ P+ PL A
Sbjct: 294 TSSSS-SSSSSSSSSSSSPTKQAPAALGFYPMGPYSLPLPAQGDAAEGNAAVGSGDGTVT 352
Query: 432 FTSTSTPVPASGPIPPEDKDVTNNKKNKGR 521
S P PA+ P+P + K V + +GR
Sbjct: 353 APSPPPPPPAAAPLPVKPKLVKLGARKRGR 382
>09_02_0252 - 6315834-6315959,6316074-6317018
Length = 356
Score = 31.5 bits (68), Expect = 0.91
Identities = 24/89 (26%), Positives = 34/89 (38%)
Frame = +3
Query: 327 VPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIPPEDKDVTNNK 506
+PAA D P P PL T + S++TP GP+P + T++
Sbjct: 1 MPAAADLPPPPPPLAIPLPETTRRPRRRTREVSSRYLSSTTP----GPVPSSPRLSTSSS 56
Query: 507 KNKGRLRVPQRAAG*CPRTDRRSPQVPPP 593
+ RAA P + P PPP
Sbjct: 57 RTPSPRAHRPRAA--TPFANENHPPPPPP 83
>07_01_0294 + 2130956-2131087,2131495-2131950
Length = 195
Score = 31.5 bits (68), Expect = 0.91
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -3
Query: 670 NLSELGSQGHGARHRSGIR-RNVGSRWGGGTWGERRSVLGHQPAALWGTR-SRP 515
N++ GS+ G RSG R R G R GGG G+ + LGH+ G R RP
Sbjct: 131 NVAAAGSEVGGGGRRSGRRARRSGDRRGGGG-GQVEATLGHRRGGSGGGRWDRP 183
>01_07_0248 + 42261373-42261609,42261733-42261905,42261986-42262058,
42262148-42262282,42262352-42262562,42262886-42263034,
42263169-42263267,42263821-42263989,42264176-42264308,
42264600-42264694,42264774-42264882,42265136-42265295,
42265433-42265594,42265814-42265985,42266254-42266402,
42266914-42266951,42267779-42267839,42267913-42268155,
42268233-42268315,42269521-42269609,42270449-42270495,
42270576-42270656,42270737-42270899,42271077-42271267,
42271691-42271762
Length = 1097
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = +3
Query: 456 PASGPIPPEDKDVTNNKKN--KGRLRVPQRAAG*CPRTDRRSPQVPPPQRLPTFLRMPER 629
P P PP +DV +N+K V QR + RR P PP +R P R+
Sbjct: 979 PMKAPPPPPKRDVPHNEKGAPSAEKDVQQRR----EPSPRRKPASPPRKRTPPNRRIESP 1034
Query: 630 CRAP*P 647
R P P
Sbjct: 1035 RRQPDP 1040
>01_06_0146 + 26969011-26969995,26970878-26970930
Length = 345
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/100 (25%), Positives = 33/100 (33%)
Frame = +3
Query: 309 PSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIPPEDK 488
P P + P P P P +S A S P A P PP
Sbjct: 28 PHPATDPPPISPQNPTPPPPPLPASAAAPTTPSPNHSGDP---SRPIPSQAPAPPPPPTA 84
Query: 489 DVTNNKKNKGRLRVPQRAAG*CPRTDRRSPQVPPPQRLPT 608
D + + R P+ A P D+ +P PPP P+
Sbjct: 85 DPSPPLPHDNRTPQPRAAPPPAPAPDQPAPPSPPPSLPPS 124
>06_03_0828 + 25137782-25138312,25141349-25141588
Length = 256
Score = 30.7 bits (66), Expect = 1.6
Identities = 32/127 (25%), Positives = 45/127 (35%), Gaps = 22/127 (17%)
Frame = -3
Query: 706 RRIAISGLSFVINLSELGSQGHGARHRSGIRRNVGSRW----------GGGT-----WGE 572
RR + + S + ++ + H + RR G RW GGG GE
Sbjct: 100 RRGGAASREIAMRRSGVAARSAASTHSTPWRRTTGGRWARGGGGRLEAGGGAAEEAGGGE 159
Query: 571 RRSVLGHQ-------PAALWGTRSRPXXXXXFVTSLSSGGIGPDAGTGVLVEVKAGGTLD 413
R +V G Q P +W P + GG+G D +L+ V GG
Sbjct: 160 RAAVSGEQRGRRRGRPDPIWAGGGPPHGINRCCRLVGGGGVGGDGADRLLLVVVGGGEEG 219
Query: 412 LGGFTFD 392
G T D
Sbjct: 220 DDGGTAD 226
>11_04_0097 + 13448740-13450725
Length = 661
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/68 (29%), Positives = 27/68 (39%)
Frame = +3
Query: 435 TSTSTPVPASGPIPPEDKDVTNNKKNKGRLRVPQRAAG*CPRTDRRSPQVPPPQRLPTFL 614
T T P PA ++ K RLRV +A P +R+P P P P
Sbjct: 31 TPTPAPTPADADQATPTDAAAERRRRKRRLRVEPPSARGGP-APQRAPGAPRPASNPNAP 89
Query: 615 RMPERCRA 638
++PE A
Sbjct: 90 KLPEPASA 97
>01_07_0126 -
41222916-41222942,41223120-41223190,41223478-41223560,
41223587-41223653,41223740-41223848,41224431-41224511,
41224671-41224940,41225035-41226510,41226832-41226908,
41227812-41227912,41229397-41229660,41230964-41231136
Length = 932
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/93 (23%), Positives = 36/93 (38%)
Frame = +3
Query: 258 ATSPST*TAAIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFT 437
A SP+ ++ G PPSP+ +V AA P + +TSS+ A
Sbjct: 24 AASPAPVPSSFGPRPRPPSPSTSVGAAPQPPPHSQNISSTSSSNISLPTPSLDLPDVADL 83
Query: 438 STSTPVPASGPIPPEDKDVTNNKKNKGRLRVPQ 536
+S +P+ G D + N + P+
Sbjct: 84 FSSPSLPSRGSTSMMDSTSRKRESNGSAFQDPR 116
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 306 PPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVP 458
PPSPT + P+A P+PTP A+SS + F S+S+P P
Sbjct: 94 PPSPTTS-PSASSLPPVPTPRSASSSKCS---APTSAQTPTRFLSSSSPPP 140
>04_03_0191 -
12452369-12452499,12452875-12453077,12453641-12453835,
12454301-12454809
Length = 345
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 231 RTQDRPGRAWLWRLHRHIRRT 169
R Q RP R W+WRLH + R+
Sbjct: 39 RGQIRPLRGWIWRLHAGVSRS 59
>01_06_1816 +
40086972-40087820,40088324-40088459,40088544-40088640,
40088742-40088842,40089149-40089312,40089407-40089595,
40089904-40090025,40090200-40090242
Length = 566
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 457 GTGVLVEVKAGGTLDLGGFTFDAVVEDVAHRGVGMGKESI 338
G G+ + AG G FT DA V HRGV +G ++
Sbjct: 479 GVGLTAFLAAGMWFGAGVFTSDAAVISTIHRGVPVGVAAV 518
>09_06_0038 -
20415363-20415883,20415917-20416596,20416858-20416911,
20417440-20417489,20417665-20417800,20419030-20419128,
20419411-20419676
Length = 601
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = +3
Query: 240 IRKINNATSPST*TAAIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXX 419
+R+ + ++SPS+ +++ SSPPS + ++ + A+SS A
Sbjct: 4 LRRSSTSSSPSSSSSSPTAASSPPSSSWIHLRSLLVAAASSSSSASSSAAAGSSVAMVSA 63
Query: 420 XXXAFTSTSTPVPASGPIP 476
A +S+ +P PA P P
Sbjct: 64 SAPAASSSPSPSPAPAPAP 82
>08_02_0703 - 20188489-20190246
Length = 585
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/70 (28%), Positives = 26/70 (37%)
Frame = +3
Query: 180 CVDGVATTKLCPDGLVFDPTIRKINNATSPST*TAAIGLNSSPPSPTHNVPAAMDSLPIP 359
CVD A LCP G N+A + T +PP+P A +L
Sbjct: 77 CVDACAGLSLCPPGASAATAAAIPNDALRAAIRTWCARHGRAPPAPPSAAEAREAALLRA 136
Query: 360 TPLCATSSTT 389
P A +TT
Sbjct: 137 VPAAAARTTT 146
>06_03_1257 -
28790660-28790785,28791126-28791283,28791528-28791604,
28791825-28791955
Length = 163
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -3
Query: 790 KNP-QFGVPCSAFPQKPLEPIPRIRE 716
KNP QF P AFP +PL P P R+
Sbjct: 20 KNPCQFSQPTPAFPSRPLTPPPPPRK 45
>05_03_0343 +
12732673-12732792,12732903-12733091,12733220-12733387,
12733468-12733522,12733646-12733704,12734784-12734909,
12737281-12737409,12737486-12737540,12737633-12737808,
12737903-12737986,12738602-12738625
Length = 394
Score = 29.1 bits (62), Expect = 4.9
Identities = 28/112 (25%), Positives = 42/112 (37%), Gaps = 7/112 (6%)
Frame = +3
Query: 279 TAAIGLNSSPPSPTHNVPAAMDSLPIP---TPLCATSSTTAXXXXXXXXXXXXAFTSTST 449
+ I + + P+P+ P A + P+ P ATS A T T
Sbjct: 53 SGTIDRSKAAPAPSAGTPGAGTTPPVHDLNVPYEATSEEYATPTADMLFPPTPLQTPIQT 112
Query: 450 PVPASGP----IPPEDKDVTNNKKNKGRLRVPQRAAG*CPRTDRRSPQVPPP 593
P+P + IP D + + R + A P+T R SP +PPP
Sbjct: 113 PLPGTDAGMYNIPTGPSDYAPSPISDVRNGMAMNGAD--PKTGRPSPYMPPP 162
>03_05_0646 -
26385447-26385463,26385546-26385657,26385838-26385957,
26386120-26386371
Length = 166
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 97 LPLQAPNSSAPLKTASMKTTDNATSSSN---VSMESPQPSSA 213
LPL AP+S A + T DN TS+S V +P P++A
Sbjct: 5 LPLLAPDSKAATSSPLCLTLDNPTSTSTSPAVPSSAPPPAAA 46
>02_01_0213 + 1416721-1417440
Length = 239
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = -3
Query: 646 GHGARHRSGIRRNVGSRWGGGTWGERRSVLGHQPAALWGTRSRPXXXXXFVTSLSSG-GI 470
G GA+ G+ G+ G G ++ +G A G + ++ +G G+
Sbjct: 82 GAGAKAAIGVGAGAGAGAGAGVGAGAKAAIGAGTGAGAGAGAGAGVGAGAKAAIGAGAGV 141
Query: 469 GPDAGTGVLVEVKAGGTLDLG 407
G AG G V AG +G
Sbjct: 142 GAGAGAGAGAAVGAGAKAAIG 162
>09_06_0205 -
21567467-21567655,21567791-21567876,21567965-21568037,
21568267-21568326,21568887-21568935,21569328-21569431,
21569587-21569640,21569719-21569763,21569817-21569879,
21570415-21570615,21570620-21570797,21570900-21570993,
21571075-21572478,21572560-21572604,21572710-21572788,
21573424-21573589,21573679-21573771,21573872-21573929,
21574063-21574120,21574210-21574367,21575130-21575177,
21575269-21575320,21575404-21575529
Length = 1160
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = +2
Query: 335 RNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKKQ 514
R+GF+ D + N I T+V C HF++ G C + + C+ ++K
Sbjct: 478 RDGFYVDFDKLNEDCLLNEISKTITDVSCPQMPHFND--GLCPEDVGSSKSSCSVRKKSS 535
Query: 515 RTASSA 532
+ +SA
Sbjct: 536 KRQNSA 541
>09_04_0005 +
13612060-13612291,13612381-13612510,13612726-13612926,
13613086-13613185,13613513-13613559,13613871-13613964,
13614042-13614192,13614777-13614923,13614994-13615067,
13615288-13615376,13615840-13615954,13616104-13616301
Length = 525
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 306 PPSPTHNVPAAMDSLPIPTPLC 371
PP P H PAA+ LP+P P C
Sbjct: 4 PPPPPH--PAALLPLPLPLPFC 23
>06_03_1146 - 28004896-28005554,28005664-28005844
Length = 279
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +3
Query: 300 SSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPAS-GPIP 476
SSPPSP PAA P+P+ T S + T +S P PA+ P P
Sbjct: 162 SSPPSPA---PAAATPSLAPSPVATTPSPSPSVSPMAPAPAPTTSTPSSPPAPAAMAPSP 218
>06_02_0152 -
12316242-12316248,12316634-12316800,12317689-12317800,
12317930-12317999,12318535-12318535,12318791-12319144
Length = 236
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 240 IRKINNATSPST*TAAIGLNSSPPSPTHNVPAAMDSLP-IPTPL 368
+ ++++ P+T A G +SS P+PT ++P SLP PTP+
Sbjct: 29 VPRLSSFRPPATDAATPGSDSSYPTPT-SIPPPPTSLPSTPTPV 71
>04_04_1173 + 31469357-31469920
Length = 187
Score = 28.7 bits (61), Expect = 6.4
Identities = 26/75 (34%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Frame = -3
Query: 664 SELGSQGHGARHRSGIRRNVGSRWGGGTWG-----ERRSVLGHQPAALWGTRSRPXXXXX 500
SE G+ HG G G R GGG+ G E S AA GT +
Sbjct: 88 SEGGTSRHGGGEHGGEEEEGGRRGGGGSIGTSLPPENSSSAADSTAAAAGTLN---SNSP 144
Query: 499 FVTSLSSGGIGPDAG 455
+S SSGG G AG
Sbjct: 145 SSSSSSSGGSGGRAG 159
>04_03_0672 +
18559984-18559986,18560096-18560569,18560666-18560836,
18561494-18561640
Length = 264
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 194 RHNQALPGRSCVRPYYQEDQQCDQPFNVDCGDRTELQPPKPNSQCPRR 337
RH + P +S + P Y D Q P N G R E P + +S +R
Sbjct: 43 RHPEP-PSKSPLHPAYTPDAQGQSPMNPQHGRRQEADPHRRHSLSQQR 89
>03_05_0768 + 27575303-27575980,27576427-27576543
Length = 264
Score = 28.7 bits (61), Expect = 6.4
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = -3
Query: 493 TSLSSGGIGPDAGTGVLVEVKAGGTLDLGGFTFDAVVEDVAHRGVGMGKESIA 335
TS S+GG G DA GV VEV + G D GG A +E+ G S+A
Sbjct: 44 TSSSAGGGGLDACPGVRVEVISDGH-DEGGVASAASLEEYLATLDAAGAASLA 95
>01_05_0199 -
19174971-19175105,19176302-19176628,19176813-19176915,
19178852-19178916,19179941-19180048,19180213-19180305,
19180395-19180442,19180801-19180899,19180980-19181096,
19181186-19181239,19181312-19181404,19181776-19181881,
19182050-19182084,19182173-19182259,19182385-19182462,
19182528-19182596,19182682-19182780,19183644-19183685,
19184498-19184570,19184654-19184982,19185070-19185127,
19185217-19185269,19186075-19186144,19186276-19186337,
19186452-19186540,19186906-19187011,19187110-19187178,
19187295-19187330
Length = 900
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 103 LQAPNSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCST 234
L A +S P +N +SSSN +M++ PS+ T + ST
Sbjct: 235 LDAAANSVPPGAGPSHNMENTSSSSNTAMQNGGPSTVVTPVIST 278
>07_03_1160 - 24430240-24431268
Length = 342
Score = 28.3 bits (60), Expect = 8.5
Identities = 32/132 (24%), Positives = 47/132 (35%), Gaps = 2/132 (1%)
Frame = +3
Query: 306 PPSPTHNVPAAMDSLPIPTPLCATSS-TTAXXXXXXXXXXXXAFTSTSTPVP-ASGPIPP 479
PP P N P D LP+P P + +S + P P +GPI P
Sbjct: 181 PPQPIPNGPPKPDMLPMPKPDGSPNSYAPSVPDQSTQPNPNGPSIPNQPPQPIPNGPIKP 240
Query: 480 EDKDVTNNKKNKGRLRVPQRAAG*CPRTDRRSPQVPPPQRLPTFLRMPERCRAP*PWLPS 659
+ N + PQ P+ D+ PPQ P P++ P P PS
Sbjct: 241 DQPPQPNPDMPPKPDQPPQPCPDGPPKPDQ------PPQPNPNGPPKPDQPPQPNPNGPS 294
Query: 660 SERFITKESPEI 695
+ +P++
Sbjct: 295 KPDQPPRPNPDM 306
>07_03_0476 - 18547223-18548187,18548743-18549958
Length = 726
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 198 TTKLCPDGLVFDPTIRKINNATSPST*TAAIGLNSSPPSPTHNVPAAMDSLPIP 359
T KL P F T + ++ A+ L PPS +H+ AA+ SLP P
Sbjct: 202 TIKLLPSANAFRVTDFATEHNHPLASAAPAVSLALLPPSSSHHTIAAVASLPDP 255
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/66 (30%), Positives = 23/66 (34%)
Frame = +3
Query: 282 AAIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPA 461
A G + PP P H PAA P P P + S A + P P
Sbjct: 314 AGAGTGAPPPPPAH--PAA----PAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPG 367
Query: 462 SGPIPP 479
GP PP
Sbjct: 368 PGPPPP 373
>02_05_1120 +
34257504-34258294,34258483-34258571,34258616-34258713,
34259269-34259292,34259314-34259404,34259761-34259813,
34259933-34260151
Length = 454
Score = 28.3 bits (60), Expect = 8.5
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +3
Query: 432 FTSTSTPVPA--SGPIPPEDKDVTNNKKNKGRLRVPQRAAG*CPRTDR--RSPQVPPPQR 599
F+S+S+P P P PP D+D + K ++G R P + R DR +P P +R
Sbjct: 20 FSSSSSPNPPFPPPPPPPNDRDDASPKPSEGEGRNPAASLFQDLR-DRLMSTPSHLPSRR 78
Query: 600 LPT 608
+PT
Sbjct: 79 IPT 81
>02_05_0932 - 32841331-32842242
Length = 303
Score = 28.3 bits (60), Expect = 8.5
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Frame = +1
Query: 112 PNSSAPLKTASMKT--TDNATSSSNVSME-SPQPSSARTVL-CSTLLSGRSTMR-PALQR 276
P+ SA L A + D + +S E SP P R C+ L S++R P LQ+
Sbjct: 19 PSFSAALLDAIYHSLDADGSLPASPADAEGSPVPGRRRRPSQCNNLSPSASSVRSPRLQK 78
Query: 277 RLRR*D*TPAPQAQLTMSPPQ 339
R P PQ L + PPQ
Sbjct: 79 TPRPCRVRPDPQPSLLLPPPQ 99
>02_03_0134 - 15596379-15597689
Length = 436
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 112 PNSSAPLKTASMKTTDNATSSSNVSMESPQPSSART 219
P+SS +T + ++T + SSS S ++PQ SS+ T
Sbjct: 60 PSSSFSTRTGTSRSTFGSASSSIHSSKAPQTSSSTT 95
>01_01_0242 +
1997427-1997429,1997893-1998580,2000199-2000234,
2000786-2001114,2001178-2001855
Length = 577
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 292 D*TPAPQAQLTMSPPQWILCPSRPLC 369
D PA LT++PP W+ P RP C
Sbjct: 18 DCEPATCGNLTINPPFWLDEPGRPPC 43
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,740,185
Number of Sequences: 37544
Number of extensions: 668535
Number of successful extensions: 3171
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 2777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3149
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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