Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30348
(873 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 41 0.001
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 38 0.009
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 38 0.012
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 34 0.12
Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical pr... 34 0.15
Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical p... 34 0.15
U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription f... 34 0.15
U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein ( Caeno... 34 0.15
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 32 0.47
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 31 0.81
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 31 1.4
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 31 1.4
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 31 1.4
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 31 1.4
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 31 1.4
AF016686-15|AAB66231.3| 572|Caenorhabditis elegans C-type lecti... 30 1.9
AC084159-10|AAK39362.1| 310|Caenorhabditis elegans Hypothetical... 30 1.9
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 30 2.5
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 30 2.5
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 30 2.5
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 29 3.3
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z29443-10|CAA82578.2| 315|Caenorhabditis elegans Hypothetical p... 29 4.3
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 4.3
AB121091-1|BAD14918.1| 315|Caenorhabditis elegans T-box transcr... 29 4.3
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 29 5.7
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 5.7
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 29 5.7
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 29 5.7
Z93377-3|CAB07580.1| 358|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 28 7.6
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 28 7.6
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 41.1 bits (92), Expect = 0.001
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 317 NSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDS 475
N +C F A D + C +FY C+ G + C +G F+ C WP +
Sbjct: 1242 NGECSEHGSFIA--DANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSA 1292
Score = 37.1 bits (82), Expect = 0.016
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +3
Query: 120 KCPAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKIN-NATSPST*TAAIGL 296
+C D C+ F+ CV G CP G VF+P + + + PS A
Sbjct: 1244 ECSEHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAVPSCSGQASDS 1303
Query: 297 NSSPPSPTHN 326
NSS S T+N
Sbjct: 1304 NSSYGSSTYN 1313
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 111 AQFKCPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFD 233
A+F C +K DG Y ++F CV G A CPD LVF+
Sbjct: 95 AEFDCTSKQDGIYSIGCS-NQFISCVAGGAYMAKCPDSLVFN 135
Score = 31.5 bits (68), Expect = 0.81
Identities = 29/132 (21%), Positives = 46/132 (34%), Gaps = 1/132 (0%)
Frame = +3
Query: 108 SAQFKCPA-KDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINNATSPST*TA 284
S F C +DG Y D D F+ C + + + CP G VF+ + + + T
Sbjct: 188 SIDFDCNGLEDGNYADGCN-DVFYSCSNNMVFQRYCPPGTVFNINQQSCDFQCTTDDPTT 246
Query: 285 AIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPAS 464
+ ++S T P DS T STT F + +T
Sbjct: 247 TVSYSTS----TITTPQEDDSEYSSTTSADVISTTTTPSIDAIETTTTGFDAVTTTTTTQ 302
Query: 465 GPIPPEDKDVTN 500
P ++ V +
Sbjct: 303 TPFVCQEGQVNS 314
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 37.9 bits (84), Expect = 0.009
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = +2
Query: 323 QCPRRNGFFAHPDPSV----C-NIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQ 487
+C + +G + D ++ C N+F++C EG A C A L F+ +C WP +
Sbjct: 170 ECSQVSGEYCESDGNISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNV--M 227
Query: 488 GCNEQQKK 511
C+E+ +K
Sbjct: 228 DCSEKSEK 235
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 135 DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTI 242
DG + FF C +G+A + CP LVF+P I
Sbjct: 182 DGNISKSECSNVFFSCSEGIAHRRNCPANLVFNPAI 217
Score = 33.5 bits (73), Expect = 0.20
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 123 CPAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVF 230
C DG + R F C +G+ CPDGL+F
Sbjct: 239 CGEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMF 274
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +3
Query: 87 TAVAAIASAQFKCPAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVF 230
T + FKC KDG + C KF CV+G++ CP+GL F
Sbjct: 554 TRAPTTTTPAFKC-TKDGFFGVPSDCLKFIRCVNGISYNFECPNGLSF 600
Score = 35.9 bits (79), Expect = 0.038
Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
Frame = +3
Query: 90 AVAAIASAQFKCPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINNATS 266
A AS C K DG Y + C F C+ + + CP GL + +++ +T+
Sbjct: 470 ATTTTASNTNVCSGKSDGFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYCTTSTA 529
Query: 267 PST*TAAIGLNSSPPSPTHNVPAAMDSLPIPT 362
++ +P + T + P + PT
Sbjct: 530 SG---CSVTTTRAPTTTTKSAPTVTTTTRAPT 558
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 314 PNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPD 472
P +C + +GFF P S C F C+ G + +C GL F + C PD
Sbjct: 562 PAFKCTK-DGFFGVP--SDCLKFIRCVNGISYNFECPNGLSFHADTMMCDRPD 611
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 123 CPAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINNATS 266
CP DG Y K+ +CV+ V + CP+GL FD + + +S
Sbjct: 43 CPDGDGLYAVGCS-SKYLQCVNNVEYEQSCPEGLYFDRLLARCERRSS 89
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 374 NIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKKQRTASSAPKSS 544
++FY C G+ C A L F+ Y G C + S + C Q + S PK++
Sbjct: 589 SVFYICANGQVVATTCPANLIFNPYVGECDY--STNVRDCQGYQPTTTPSYSYPKTT 643
Score = 31.5 bits (68), Expect = 0.81
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 99 AIASAQFKCPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFD 233
A F C K +G+Y + FF C DG A CP LVF+
Sbjct: 425 AEVKVDFDCTGKPNGKYIKEACTKSFFTCHDGRAFANDCPGDLVFN 470
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 102 IASAQFKCP-AKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINNATS 266
IA F C DG + F+ C +G CP L+F+P + + + +T+
Sbjct: 567 IALDDFSCKHLADGNHASGLCKSVFYICANGQVVATTCPANLIFNPYVGECDYSTN 622
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 371 CNIFY-NCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKKQRTASSAP 535
C+ +Y +CI+ + ++ C L F + S CV+P A + C+ RT + P
Sbjct: 967 CSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDA--KECSIATTLDRTPPAVP 1020
>Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +3
Query: 294 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPI 473
LN PP T ++ + LP P +S A A +STST P++ P
Sbjct: 52 LNPYPPMQTTDIDYSSAFLPTHPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPA 111
Query: 474 PPEDKDVTNNK 506
P DV K
Sbjct: 112 PTSTTDVLELK 122
>Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +3
Query: 294 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPI 473
LN PP T ++ + LP P +S A A +STST P++ P
Sbjct: 52 LNPYPPMQTTDIDYSSAFLPTHPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPA 111
Query: 474 PPEDKDVTNNK 506
P DV K
Sbjct: 112 PTSTTDVLELK 122
>U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription
factor E12/47 homolog protein.
Length = 399
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +3
Query: 294 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPI 473
LN PP T ++ + LP P +S A A +STST P++ P
Sbjct: 52 LNPYPPMQTTDIDYSSAFLPTHPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPA 111
Query: 474 PPEDKDVTNNK 506
P DV K
Sbjct: 112 PTSTTDVLELK 122
>U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein (
Caenorhabditis elegansN2 basic-helix-loop-helix
transcription factor E12/47homolog mRNA, complete cds.
).
Length = 399
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +3
Query: 294 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPI 473
LN PP T ++ + LP P +S A A +STST P++ P
Sbjct: 52 LNPYPPMQTTDIDYSSAFLPTHPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPA 111
Query: 474 PPEDKDVTNNK 506
P DV K
Sbjct: 112 PTSTTDVLELK 122
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 32.3 bits (70), Expect = 0.47
Identities = 34/154 (22%), Positives = 48/154 (31%)
Frame = +3
Query: 231 DPTIRKINNATSPST*TAAIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXX 410
+PT++ A P+T +PP PT P P PT TT
Sbjct: 159 EPTVKN-TTAAEPTTEAPPPPTTKAPPPPTTKAP------PPPTTKAPPPPTTKAPPPPT 211
Query: 411 XXXXXXAFTSTSTPVPASGPIPPEDKDVTNNKKNKGRLRVPQRAAG*CPRTDRRSPQVPP 590
P P + P P + N K P +AA P PP
Sbjct: 212 TNKEVTTVAPVPKPAPVTAPAP--NPPAPENTTAKVETTKPTKAAPPAPTPVPNPVPSPP 269
Query: 591 PQRLPTFLRMPERCRAP*PWLPSSERFITKESPE 692
P T + + P P+ + T E+P+
Sbjct: 270 PPPANTTVTEEKTTVPPATDEPAPKTVATTENPK 303
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 31.5 bits (68), Expect = 0.81
Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Frame = +3
Query: 450 PVPASGPIPPEDKDVTNNKKNKGRLRVPQRAAG*CPRTDRRSPQVPPPQR-LPTFLRMPE 626
P P P P ED VT P+ G C + D + Q PPP P +PE
Sbjct: 351 PAPTPAPAPAEDPVVTP---------APEELTGVCYKDDCQGLQTPPPPAPPPPAPAVPE 401
Query: 627 RCRAP*P 647
+AP P
Sbjct: 402 EAQAPTP 408
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 123 CPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTI 242
C K DG + + F C G+A CP LVF+PTI
Sbjct: 247 CEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTI 287
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 123 CPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTI 242
C K DG + + F C G+A CP LVF+PTI
Sbjct: 247 CEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTI 287
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Frame = +2
Query: 209 LPGRSCVRP--YYQEDQQCDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNI- 379
L G+SC +P ++ + C P C + +C + G++ H +C+
Sbjct: 699 LYGQSCEKPCPHFTFGKNCRFPCK--CARENSEGCDEITGKCRCKPGYYGHHCKRMCSPG 756
Query: 380 FYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQG 490
+ G A + C AG+ D +G C AG QG
Sbjct: 757 LFGA--GCAMKCSCPAGIRCDPVTGDCTKKCPAGYQG 791
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Frame = +2
Query: 209 LPGRSCVRP--YYQEDQQCDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNI- 379
L G+SC +P ++ + C P C + +C + G++ H +C+
Sbjct: 699 LYGQSCEKPCPHFTFGKNCRFPCK--CARENSEGCDEITGKCRCKPGYYGHHCKRMCSPG 756
Query: 380 FYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQG 490
+ G A + C AG+ D +G C AG QG
Sbjct: 757 LFGA--GCAMKCSCPAGIRCDPVTGDCTKKCPAGYQG 791
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 356 PDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTC 460
PD C FY C G T+ C G +D++ TC
Sbjct: 167 PDVYNCKNFYQCASGLWTQRSCGEGTIWDQHKLTC 201
>AF016686-15|AAB66231.3| 572|Caenorhabditis elegans C-type lectin
protein 43 protein.
Length = 572
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +2
Query: 236 YYQEDQQCDQPFNVDC--GDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIF 382
Y Q C+ PF+V G T P PN P GF+++ D + +F
Sbjct: 154 YTQLKYICEVPFHVTSTSGTPTRAPTPTPNGSVPCPEGFWSYKDNTCLKLF 204
>AC084159-10|AAK39362.1| 310|Caenorhabditis elegans Hypothetical
protein Y73B3A.5 protein.
Length = 310
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +3
Query: 282 AAIGLNSSPPSPTHNV--PAAMDSLPIPTPLCATSST--TAXXXXXXXXXXXXAFTSTST 449
+A+ L + TH+V P+ DS+ P+ A+S+T T+ + +S++T
Sbjct: 110 SALSLLGTDSPTTHSVSTPSPTDSVCSPSSSVASSATPSTSSPVDESRQCRKRSLSSSTT 169
Query: 450 PVPASGPIPPEDKDVTNNKKN 512
P + P PP K + N N
Sbjct: 170 PSTTAPPQPPTKKGMKPNPLN 190
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Frame = +3
Query: 201 TKLCPDGLVFDP-TIRKINNATSPST*TAAIGLNSSPPSPTH-NVPAAMDSLPIP----- 359
T + + ++ P T + I + +PS + ++ NSSP + TH N+ + + +P
Sbjct: 1162 TNITSEPVIVQPITAQVITHLATPSPVSHSLSSNSSPSATTHSNMSSIQSTTSVPGRRFT 1221
Query: 360 -TPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPI 473
P+ S + A TS PVP+ P+
Sbjct: 1222 VQPVSQAESGISSSISTPHPEPTPAITSCPPPVPSVPPV 1260
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Frame = +3
Query: 201 TKLCPDGLVFDP-TIRKINNATSPST*TAAIGLNSSPPSPTH-NVPAAMDSLPIP----- 359
T + + ++ P T + I + +PS + ++ NSSP + TH N+ + + +P
Sbjct: 1162 TNITSEPVIVQPITAQVITHLATPSPVSHSLSSNSSPSATTHSNMSSIQSTTSVPGRRFT 1221
Query: 360 -TPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPI 473
P+ S + A TS PVP+ P+
Sbjct: 1222 VQPVSQAESGISSSISTPHPEPTPAITSCPPPVPSVPPV 1260
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +2
Query: 212 PGRSCVRPYYQEDQQCD--QPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFY 385
PG++CVR + +CD P + D R + +C NG+ PD C +
Sbjct: 221 PGKNCVRTVQPDPPECDVSDPMSCDPAKREVCIFVENTYKCRCANGYSRLPD-GRCVVIN 279
Query: 386 NCIE 397
C E
Sbjct: 280 ECAE 283
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +2
Query: 212 PGRSCVRPYYQEDQQCD--QPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFY 385
PG++CVR + +CD P + D R + +C NG+ PD C +
Sbjct: 805 PGKNCVRTVQPDPPECDVSDPMSCDPAKREVCIFVENTYKCRCANGYSRLPD-GRCVVIN 863
Query: 386 NCIE 397
C E
Sbjct: 864 ECAE 867
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +2
Query: 212 PGRSCVRPYYQEDQQCD--QPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFY 385
PG++CVR + +CD P + D R + +C NG+ PD C +
Sbjct: 221 PGKNCVRTVQPDPPECDVSDPMSCDPAKREVCIFVENTYKCRCANGYSRLPD-GRCVVIN 279
Query: 386 NCIE 397
C E
Sbjct: 280 ECAE 283
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +2
Query: 212 PGRSCVRPYYQEDQQCD--QPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFY 385
PG++CVR + +CD P + D R + +C NG+ PD C +
Sbjct: 805 PGKNCVRTVQPDPPECDVSDPMSCDPAKREVCIFVENTYKCRCANGYSRLPD-GRCVVIN 863
Query: 386 NCIE 397
C E
Sbjct: 864 ECAE 867
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane
cell adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +2
Query: 212 PGRSCVRPYYQEDQQCD--QPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFY 385
PG++CVR + +CD P + D R + +C NG+ PD C +
Sbjct: 805 PGKNCVRTVQPDPPECDVSDPMSCDPAKREVCIFVENTYKCRCANGYSRLPD-GRCVVIN 863
Query: 386 NCIE 397
C E
Sbjct: 864 ECAE 867
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/41 (31%), Positives = 27/41 (65%)
Frame = +1
Query: 103 LQAPNSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVL 225
+ AP++S P T+S+ T+ +TSSS+++ P+++ + L
Sbjct: 217 ISAPSTSQPSTTSSLITSPPSTSSSSMAPRKTPPNASSSSL 257
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/79 (26%), Positives = 37/79 (46%)
Frame = +1
Query: 100 PLQAPNSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGRSTMRPALQRR 279
P +AP ++ +T S T + ++ V+ + + S+ARTV +T + ST+R +
Sbjct: 134 PPEAPTKASTARTISTTETTTSPPTTTVTPRTTRSSTARTV--ATTKTSPSTLRTTTKPP 191
Query: 280 LRR*D*TPAPQAQLTMSPP 336
T + T SPP
Sbjct: 192 TTTTIATTRITTKTTTSPP 210
>Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical
protein F29C12.1b protein.
Length = 590
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 275 VDCGDRTELQPPKPNSQCPRRNGF 346
+D G T L PP P +QCPR+ G+
Sbjct: 448 IDAGKGTPLAPP-PQAQCPRQPGW 470
>Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical
protein F29C12.1a protein.
Length = 592
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 275 VDCGDRTELQPPKPNSQCPRRNGF 346
+D G T L PP P +QCPR+ G+
Sbjct: 450 IDAGKGTPLAPP-PQAQCPRQPGW 472
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 447 TPVPASGPIPPEDKDVTNNKKNKGRLRVPQRAAG*CPRTDRRSPQVPPPQRL-PTFLRMP 623
+P + P P + + + + R R P + PR RRSP P +R P R P
Sbjct: 442 SPSQSKSPAPRRRRSPSKSPQAPRRRRSPSGSKSRSPRR-RRSPAAAPRRRQSPQRRRSP 500
Query: 624 ERCRAP 641
R R+P
Sbjct: 501 RRRRSP 506
>Z29443-10|CAA82578.2| 315|Caenorhabditis elegans Hypothetical
protein T07C4.2 protein.
Length = 315
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 118 SSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGR 249
S + K S D+ T S+ + SPQP +RTV S L R
Sbjct: 197 SQSDRKRNSPSADDSTTDESSSQVSSPQPKKSRTVSVSPPLMPR 240
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/71 (26%), Positives = 36/71 (50%)
Frame = +1
Query: 118 SSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGRSTMRPALQRRLRR*D* 297
SS+P+ + S T + +S S++S ++PQ SS T + SG ++ + L
Sbjct: 965 SSSPIPSTSQNTNPSTSSGSSMSTQTPQ-SSQSTSPVESSTSGATSSSGSPGTTLTSISP 1023
Query: 298 TPAPQAQLTMS 330
+P+P + + S
Sbjct: 1024 SPSPSSTIGSS 1034
>AB121091-1|BAD14918.1| 315|Caenorhabditis elegans T-box
transcription factor TBX-8 protein.
Length = 315
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 118 SSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGR 249
S + K S D+ T S+ + SPQP +RTV S L R
Sbjct: 197 SQSDRKRNSPSADDSTTDESSSQVSSPQPKKSRTVSVSPPLMPR 240
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 123 CPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTI 242
C K DG Y +F C G++ CP L++DP I
Sbjct: 61 CSTKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRI 101
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 123 CPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTI 242
C K DG Y +F C G++ CP L++DP I
Sbjct: 61 CSTKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRI 101
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/73 (24%), Positives = 29/73 (39%)
Frame = +3
Query: 261 TSPST*TAAIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTS 440
T+P+ TA+ + P T++V + + +P P S TT + T
Sbjct: 549 TTPTHTTASQPTTTKPVVTTNSVTPSTGTTTVPVPTTTGSPTTQTTAPVTKPTVPSSTTQ 608
Query: 441 TSTPVPASGPIPP 479
T+ PV PP
Sbjct: 609 TAPPVTTPTSQPP 621
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = +3
Query: 255 NATSPST*TAAIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAF 434
N+ +PST T + + ++ SPT A + +P+ T+
Sbjct: 569 NSVTPSTGTTTVPVPTTTGSPTTQTTAPVTKPTVPSSTTQTAPPVTTPTSQPPVTTTSLL 628
Query: 435 TSTSTP-VPASGPIPPEDKDV 494
T+ +TP VP + + P V
Sbjct: 629 TTLTTPTVPVTTTVVPSSATV 649
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 123 CPAK-DGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTI 242
C K DG Y +F C G++ CP L++DP I
Sbjct: 61 CSTKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRI 101
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/79 (26%), Positives = 34/79 (43%)
Frame = +1
Query: 100 PLQAPNSSAPLKTASMKTTDNATSSSNVSMESPQPSSARTVLCSTLLSGRSTMRPALQRR 279
P++AP++S P + + S + SP P R + S + RS R R+
Sbjct: 83 PIRAPSASPPRRRRDDSPRKRSRSPPRRTRRSPSPPRRRRISRSPVRRSRSPPR----RQ 138
Query: 280 LRR*D*TPAPQAQLTMSPP 336
+ R P + Q + SPP
Sbjct: 139 VSRSRSPPPRRQQRSRSPP 157
>Z93377-3|CAB07580.1| 358|Caenorhabditis elegans Hypothetical
protein F13A7.7 protein.
Length = 358
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 290 RTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEV 415
+ ++ PKPN G+F H SV + F+ GE +V
Sbjct: 311 KRDMTSPKPNDDDGTLMGYFRHGYQSVADFFHRKTVGEEEQV 352
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +2
Query: 641 VTLAAKFGE-VYNEGEPRNCDAPLERFPDSRNWFQGL---LRESRTRDPKLGI 787
+TL G + N+G PR +E+ ++R WF L L + ++++ K+ I
Sbjct: 1655 LTLPTSIGNTIINDGNPRINTTGMEKSDEARAWFDSLTLNLEQGKSQNEKMWI 1707
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = +3
Query: 474 PPEDKDVTNNKKNKGRLRVPQRAAG*CPRTDRRSPQVPPPQRLPTFLRMPERCRAP*P 647
PPE NN L V + R + P PPP + P + PER +P P
Sbjct: 166 PPEKSVYENNPIAPSELNVQVK------RAPPQGPPPPPPPQAPADIDYPERLMSPPP 217
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 231 DPTIRKINNATSPST*TAAIGLNSSPPSPTHNVPAAMDSLPIPTP 365
+P+I +N SPS +++ + ++PPSP+ P A+ P P P
Sbjct: 580 EPSIPAVNPEPSPSQPSSSGPIQTAPPSPSS--PNAIPEGPPPGP 622
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,399,904
Number of Sequences: 27780
Number of extensions: 491966
Number of successful extensions: 2206
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2197
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -