Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30347
         (703 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   1.8  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   3.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   5.6  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   7.4  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   9.7  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 408 AIGSCCYYYVAFSYNILLRGAQS 340
           +IG  C++ +   YN+L  GA+S
Sbjct: 364 SIGFNCFWVMKLLYNVLRFGAES 386


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +3

Query: 540 GRGEFLCGSDNRTYSSLCRLDLHNCVHRNKKPV 638
           G   F C    R +++   L  H  VHR K P+
Sbjct: 159 GERPFKCKICGRAFTTKGNLKTHMGVHRAKPPM 191


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -2

Query: 381 VAFSYNILLRGAQSCESVTEEKHLTLLTHQRMAQGIVR 268
           V+  +  LL+G +  +SVT   H  L   Q+ +  ++R
Sbjct: 329 VSAKHRHLLKGIERADSVTWNPHKLLTAPQQCSTLLLR 366


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -2

Query: 381 VAFSYNI-LLRGAQSCESVTEEKHLTLLTHQRMAQ 280
           VAF  N+  +    SC++V EE   TLL   ++ Q
Sbjct: 256 VAFMINVGTVTLILSCDAVLEEVKTTLLLAYKIRQ 290


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +3

Query: 540 GRGEFLCGSDNRTYSSLCRLDLHNCVHRNKKP 635
           G   + C   +  +S   +L  H  +H N+KP
Sbjct: 215 GERPYGCEHCSMKFSDSNQLKAHVLIHTNEKP 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,777
Number of Sequences: 336
Number of extensions: 2839
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)