Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30347
(703 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0) 36 0.042
SB_3798| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.097
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 33 0.22
SB_58159| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 33 0.22
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_31788| Best HMM Match : Kazal_1 (HMM E-Value=0) 31 0.68
SB_44384| Best HMM Match : Kazal_1 (HMM E-Value=1.4e-21) 31 0.90
SB_37368| Best HMM Match : Kazal_1 (HMM E-Value=9.2e-09) 31 0.90
SB_15403| Best HMM Match : CH (HMM E-Value=0) 31 1.2
SB_7463| Best HMM Match : Ank (HMM E-Value=0) 30 1.6
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 29 2.8
SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19) 29 2.8
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_39832| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 3.6
SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 3.6
SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19) 29 3.6
SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_27966| Best HMM Match : RCSD (HMM E-Value=0.11) 29 3.6
SB_58180| Best HMM Match : zf-C2H2 (HMM E-Value=1e-24) 29 4.8
SB_58178| Best HMM Match : UBACT (HMM E-Value=1.7e-34) 29 4.8
SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0) 29 4.8
SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38) 28 6.4
SB_46812| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_11826| Best HMM Match : Kazal_1 (HMM E-Value=1.2e-16) 28 6.4
SB_6081| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_18275| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 325
Score = 35.5 bits (78), Expect = 0.042
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 555 LCGSDNRTYSSLCRLDLHNCVHRNKKPVTL 644
+CGSDN+TY++LC L++ C N + L
Sbjct: 207 VCGSDNKTYANLCNLEVEACKPENTDKLQL 236
Score = 29.1 bits (62), Expect = 3.6
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 555 LCGSDNRTYSSLCRLDLHNC 614
+CGSD +TY + C L++ +C
Sbjct: 53 VCGSDGKTYPNPCALEVESC 72
>SB_3798| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 34.3 bits (75), Expect = 0.097
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 543 RGEFLCGSDNRTYSSLCRLDLHNC 614
R +CG+D RTYSS C L H+C
Sbjct: 228 RSTEICGTDGRTYSSFCALREHSC 251
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 519 CVGCPVRGRGEFLCGSDNRTYSSLCRLDLHNC 614
C C +CG+D TY SLCRL + C
Sbjct: 131 CSSCNSSPADTEVCGADGVTYGSLCRLRVATC 162
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 525 GCPVRGRGEFLCGSDNRTYSSLCRLDLHNCV 617
GCP E +CG+D +Y S C ++L CV
Sbjct: 55 GCPAPNGDETICGTDGISYPSPCEMNLTACV 85
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +3
Query: 555 LCGSDNRTYSSLCRLDLHNCVHRNKKPVTL--ACRRL 659
+C S+ +TYS+ C +D C+ K V AC +L
Sbjct: 1607 VCASNGKTYSNRCDMDADACIRDTKLTVVSQGACAKL 1643
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 528 CPVRGRGEFLCGSDNRTYSSLCRLDLHNCVHRNKKPVTL 644
CP GR +++CGSD +Y + C +D C R + +T+
Sbjct: 295 CP--GRADYVCGSDGNSYFTECHMDATAC--RESRDITV 329
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 555 LCGSDNRTYSSLCRLDLHNC 614
+CGSD RTY +LCRL + C
Sbjct: 449 VCGSDLRTYVNLCRLQVEVC 468
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 528 CPVRGRGEFLCGSDNRTYSSLCRLDLHNCVHRNK 629
CPV F+CGS+ +TY++ C L + +C + +
Sbjct: 961 CPVAS--SFVCGSNGKTYTNECLLKVDSCAEQKE 992
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 546 GEFLCGSDNRTYSSLCRLDLHNC 614
G +C SD +TY+S C + + NC
Sbjct: 1079 GSTVCASDGKTYASECHVKVRNC 1101
Score = 29.1 bits (62), Expect = 3.6
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 555 LCGSDNRTYSSLCRLDLHNC 614
+CGSD +TY + C+L + +C
Sbjct: 520 VCGSDGKTYENECKLRVESC 539
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 528 CPVRGRGEFLCGSDNRTYSSLCRLDLHNC 614
CP + +CGSD TY S C L +C
Sbjct: 1435 CPPDNQNASVCGSDLVTYRSECELKAKSC 1463
>SB_58159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 510 PDRCVGCPVRGRGEFLCGSDNRTYSSLCRLDLHNCV-HRNKKPVTLACRRL 659
P+RC P +CG+D RTY+S C L L C H+ K C+ +
Sbjct: 203 PNRCHE-PCPSEASPVCGTDMRTYASRCHLQLAKCKGHKVKMIYKGRCKEI 252
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 555 LCGSDNRTYSSLCRLDLHNCVHRNKKPVTL--ACRRLLSV 668
+CG D RTYSS C +D C + V CR++L V
Sbjct: 814 VCGQDGRTYSSTCAMDARACQAQTSIAVKHPGLCRKVLDV 853
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 32.7 bits (71), Expect = 0.30
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +3
Query: 555 LCGSDNRTYSSLCRLDLHNCVHRNKKPVTLACRR 656
+CGS+N+TY++ C L + +C +N K + + R+
Sbjct: 302 ICGSNNKTYANECELRMDSC--KNNKSIAIQFRK 333
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 528 CP-VRGRGEFLCGSDNRTYSSLCRLDLHNCVH 620
CP + + + +CGSDN TY+S C+L C++
Sbjct: 219 CPDCKDKSDPVCGSDNVTYASECQLRRAACLN 250
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 519 CVGCPVRGRGEFLCGSDNRTYSSLCRLDLHNC 614
C CP ++LC S+N TY S C L+ +C
Sbjct: 1863 CPTCPKAK--DYLCASNNLTYMSKCHLERASC 1892
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Frame = +3
Query: 516 RCV---GCPVRGRGEFLCGSDNRTYSSLCRLDLHNC 614
RCV GCP + +C SD TY S+C + C
Sbjct: 2999 RCVCPPGCPPAEVSQRVCASDGLTYPSVCEMHRTAC 3034
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 519 CVGCPVRGRGEFLCGSDNRTYSSLCRLDLHNC 614
C CP + +CG++N+TY+S C L + C
Sbjct: 679 CPECPQVDKP--VCGTNNKTYTSECALQVDAC 708
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 528 CPVRGRGEF-LCGSDNRTYSSLCRLDLHNC 614
CP + E +CGSD++TY + CR+ C
Sbjct: 609 CPECSKREDPVCGSDSKTYPNECRMRQEAC 638
>SB_31788| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 352
Score = 31.5 bits (68), Expect = 0.68
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 537 RGRGEFLCGSDNRTYSSLCRLDLHNCVHRNKKPVTLACRRL 659
R + + +CGSD TY S C L + C+ + K+ L + +
Sbjct: 300 RRKRDPVCGSDGVTYRSKCHLRVAKCLRKRKRRSQLVLKHM 340
>SB_44384| Best HMM Match : Kazal_1 (HMM E-Value=1.4e-21)
Length = 85
Score = 31.1 bits (67), Expect = 0.90
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 510 PDRCVG-CPVRGRGEFLCGSDNRTYSSLCRLDLHNC 614
PD+C CP R +CGSDN TYS+ C L C
Sbjct: 37 PDKCAPICPKIYRP--VCGSDNVTYSNPCMLRSATC 70
>SB_37368| Best HMM Match : Kazal_1 (HMM E-Value=9.2e-09)
Length = 68
Score = 31.1 bits (67), Expect = 0.90
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 555 LCGSDNRTYSSLCRLDLHNC 614
+CGSD+ TY++ C LD NC
Sbjct: 21 VCGSDDVTYANACTLDERNC 40
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 528 CP-VRGRGEFLCGSDNRTYSSLCRLDLHNCVHRNKKPVTL 644
CP V+ R +CG+D TY +LCRL +C R +PV +
Sbjct: 1313 CPLVKSR---VCGTDGITYDNLCRLRAESC--RRYQPVNV 1347
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 555 LCGSDNRTYSSLCRLDLHNCVHR 623
+CG D +TY + C L L +C R
Sbjct: 984 VCGDDGQTYDNECLLQLESCSRR 1006
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 555 LCGSDNRTYSSLCRLDLHNC 614
+CGSD TY++LC L C
Sbjct: 735 VCGSDGNTYNNLCLLTAARC 754
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 549 EFLCGSDNRTYSSLCRLDLHNCVHRN 626
+ +CGSD+R Y++ C L C R+
Sbjct: 1571 QLVCGSDDRDYANECVLQARACTWRD 1596
>SB_7463| Best HMM Match : Ank (HMM E-Value=0)
Length = 864
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 81 VTARCACTSGCWQPRCCWRFR*LQL 155
V A+C+CT GC RC W++ ++L
Sbjct: 736 VAAKCSCTHGC--RRCVWKYNTVEL 758
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 555 LCGSDNRTYSSLCRLDLHNCVHRNK 629
LCGSD +TY + C ++ +C+ +NK
Sbjct: 5165 LCGSDGKTYDNQCEMERASCL-QNK 5188
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 519 CVGCPVRGRGEFLCGSDNRTYSSLCRLDLHNC 614
C CP + +CGSD +TY++ C L + C
Sbjct: 5621 CQSCPSINKP--VCGSDGKTYNNECELRQYAC 5650
>SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4475
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 555 LCGSDNRTYSSLCRLDLHNCVHRNKKPVTLA 647
+CGSD +TY + C L C +KK VT+A
Sbjct: 3981 VCGSDGKTYKNECELKRAAC--ESKKNVTVA 4009
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 504 E*PDRCVGCPVRGRGEFLCGSDNRTYSSLCRLDLHNCV--HRNKK 632
E P RC+ P + E +CG+D +TY +LC + +C HR+ +
Sbjct: 4236 ECPSRCL--PDK---EPVCGADGKTYRNLCEIRKASCEGWHRDNR 4275
>SB_32965| Best HMM Match : Kazal_1 (HMM E-Value=3.4e-19)
Length = 69
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 513 DRCVGCPVRGRGEFLCGSDNRTYSSLCRLDLHNCVHRNKKPVTLA 647
D+CV P + +CG+D +TY + C L C H N +TLA
Sbjct: 22 DKCVR-PCPAINDPVCGTDGKTYGNECMLGAATC-HSN-GTITLA 63
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 519 CVGCPVRGRGEFLCGSDNRTYSSLCRLDLHNC 614
C+ CP + +CGSD + Y ++C+L + C
Sbjct: 274 CLSCP--NMLDPVCGSDGKNYDNVCKLRQNAC 303
>SB_39832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -2
Query: 369 YNILLRGAQSCESVTEEKHLTLLTHQRMAQGIVRV 265
YN+++R S VT ++H T++ R + G+V V
Sbjct: 93 YNVMVRSRYSHGMVTVQRHGTVMVRSRYSHGMVTV 127
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 525 GCPVRGRGEFLCGSDNRTYSSLCRLDLHNCVHRNK 629
GCP + +CG+D TY +LC L L C +
Sbjct: 601 GCPSEVKP--VCGTDGVTYDNLCSLRLKACTDNTR 633
>SB_39834| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 293
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 510 PDRCVGCPVRGRG-EFLCGSDNRTYSSLCRLDLHNC 614
PD+C P+ + + +CGSDN TYS+ C L C
Sbjct: 166 PDKCA--PICNKMYQPVCGSDNVTYSNPCMLRSATC 199
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 555 LCGSDNRTYSSLCRLDLHNCVHRNKKPVTLA 647
+CG+D +TY + C L C R+ +TLA
Sbjct: 55 VCGTDGKTYGNKCMLGAATC--RSNGTITLA 83
>SB_39831| Best HMM Match : Kazal_1 (HMM E-Value=2.4e-19)
Length = 173
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 510 PDRCVGCPVRGRG-EFLCGSDNRTYSSLCRLDLHNC 614
PD+C P+ + + +CGSDN TYS+ C L C
Sbjct: 23 PDKCA--PICNKMYQPVCGSDNVTYSNPCMLRSATC 56
>SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 555 LCGSDNRTYSSLCRLDLHNCVHRNK 629
+CGSD TY + C L CVH K
Sbjct: 92 VCGSDGVTYPNHCELHRIACVHTKK 116
>SB_27966| Best HMM Match : RCSD (HMM E-Value=0.11)
Length = 652
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 242 ESERH*SRDS*KKKQDPSRRRTRS 171
E E H ++ K KQ+P RRRTRS
Sbjct: 417 EEEGHLGEEANKAKQEPPRRRTRS 440
>SB_58180| Best HMM Match : zf-C2H2 (HMM E-Value=1e-24)
Length = 201
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 528 CPVRGRGEFLCGSDNRTYSSLCRLDLHNCVHRNKKPVTLA-CRRLLS 665
CP+ + CG + ++S+ L H+ VH N+KP C R S
Sbjct: 109 CPLVPNRPYHCGYCSESFSNPNELRNHSIVHANEKPFRCGYCSRSFS 155
>SB_58178| Best HMM Match : UBACT (HMM E-Value=1.7e-34)
Length = 1236
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 528 CPVRGRGEFLCGSDNRTYSSLCRLDLHNCVHRNKKPVTLA-CRRLLS 665
CP+ + CG + ++S+ L H+ VH N+KP C R S
Sbjct: 1122 CPLVPNRPYHCGYCSESFSNPNELRNHSIVHANEKPFRCGYCSRSFS 1168
>SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1182
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 45 CVRPESLSRVRVVTARCACTSGCWQPRCC 131
C+ S +T +C C +G PRCC
Sbjct: 485 CIEGSLRSMCSQITGQCQCKAGFGGPRCC 513
>SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38)
Length = 641
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -1
Query: 586 DEYVRLSEPQRNSPRPRTGQPTQRSGYSHHCRDLHQYLWRHCRKIHLPRHLRDL*PALPS 407
+++ R + Q+N R Q Q Y HH + +Q+ RH ++ + H P LPS
Sbjct: 577 NQHHRHHQKQQNQHH-RHHQKKQNQHYRHHQKQQNQHHHRHRKQQNQHHHRHGHNPLLPS 635
Query: 406 Y 404
+
Sbjct: 636 H 636
>SB_46812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 296 CVRSVRCFSSVTLSQLCAPRRRILYEK 376
C+ RC+ ++ SQ+C P LY +
Sbjct: 3 CMEKGRCYKGISESQVCGPNEDALYRE 29
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1
Query: 565 EPQRNSPRPRTGQPTQRS 512
EPQR +P PRT QP R+
Sbjct: 1747 EPQRTAPTPRTQQPPARA 1764
>SB_11826| Best HMM Match : Kazal_1 (HMM E-Value=1.2e-16)
Length = 98
Score = 28.3 bits (60), Expect = 6.4
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 555 LCGSDNRTYSSLCRLDLHNC 614
+CG+D +TY + C L++ C
Sbjct: 50 MCGTDGKTYGNKCMLEIATC 69
>SB_6081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +3
Query: 528 CPVRGRGEF--LCGSDNRTYSSLCRLDLHNCV 617
CP+ ++ +CGSD RTY + +++ C+
Sbjct: 10 CPMAVTADYNPVCGSDGRTYPNRASMEVQGCL 41
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,137,680
Number of Sequences: 59808
Number of extensions: 392267
Number of successful extensions: 1731
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1731
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -