Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30347
         (703 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3267|AAF56093.1|  660|Drosophila melanogaster CG13830-P...    64   2e-10
AY058325-1|AAL13554.1|  662|Drosophila melanogaster GH09510p pro...    37   0.023
AE014296-1453|AAF50418.2|  662|Drosophila melanogaster CG32354-P...    37   0.023
BT003621-1|AAO39624.1|  767|Drosophila melanogaster GH04473p pro...    31   2.0  
AF454393-1|AAL51006.1|  705|Drosophila melanogaster follistatin ...    31   2.0  
AE013599-2026|AAF58158.2|  767|Drosophila melanogaster CG33466-P...    31   2.0  
BT023691-1|AAY85091.1|   68|Drosophila melanogaster IP03664p pro...    29   4.6  
AE014134-2103|AAN10787.1|   68|Drosophila melanogaster CG31704-P...    29   4.6  
X54666-1|CAA38477.1|  728|Drosophila melanogaster BRcore-TNT1-Q1...    29   6.1  
X54663-1|CAA38474.1|  663|Drosophila melanogaster BRcore-Q1-Z1 p...    29   6.1  
AL009146-4|CAA15629.1|  710|Drosophila melanogaster EG:17A9.1,FB...    29   6.1  
AE014298-238|AAN09054.1|  663|Drosophila melanogaster CG11491-PG...    29   6.1  
AE014298-237|AAF45648.1|  724|Drosophila melanogaster CG11491-PE...    29   6.1  

>AE014297-3267|AAF56093.1|  660|Drosophila melanogaster CG13830-PA
           protein.
          Length = 660

 Score = 63.7 bits (148), Expect = 2e-10
 Identities = 27/47 (57%), Positives = 33/47 (70%)
 Frame = +3

Query: 513 DRCVGCPVRGRGEFLCGSDNRTYSSLCRLDLHNCVHRNKKPVTLACR 653
           D C  CPV  +  FLCG+DNRTYSSLCRLD HNC+H     + +AC+
Sbjct: 226 DNCKPCPV-AKPTFLCGADNRTYSSLCRLDYHNCIHSTS--IRIACK 269



 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 22/54 (40%), Positives = 38/54 (70%)
 Frame = +1

Query: 232 RSLSQTQKYIYDPHNSLCHSLVCKKREVFFLRDAFTALCATKKDIIRKGDVIVT 393
           ++L + +++I+DP + LC  L CKKRE+  L D F+A+C +KK++ +  D I+T
Sbjct: 55  KNLGEHKRWIHDPSSDLCRPLNCKKREICLLEDEFSAVCVSKKELHKNRDEIIT 108


>AY058325-1|AAL13554.1|  662|Drosophila melanogaster GH09510p
           protein.
          Length = 662

 Score = 37.1 bits (82), Expect = 0.023
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +3

Query: 510 PDRCVGCPVRGRGEFLCGSDNRTYSSLCRLDLHNCVHRNK 629
           P  C         +++CGSD   YSSLC L + NC  + K
Sbjct: 381 PTECPKSDTDSSSQYVCGSDGNIYSSLCELKMLNCGPQRK 420



 Score = 34.3 bits (75), Expect = 0.16
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +3

Query: 552 FLCGSDNRTYSSLCRLDLHNCVHRNKKPVTLACRRLLSVFLSKAAQKI 695
           F+CGSDN  Y S C +   NC    K    +  +R L+ F  K   +I
Sbjct: 565 FVCGSDNNLYKSECHMRKENC---GKHVFVVPLKRCLAAFQLKGCARI 609



 Score = 32.7 bits (71), Expect = 0.50
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +3

Query: 549 EFLCGSDNRTYSSLCRLDLHNC 614
           E +CGSDN+TY + C L++ NC
Sbjct: 615 EPVCGSDNKTYLNDCFLEIENC 636



 Score = 28.7 bits (61), Expect = 8.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 558 CGSDNRTYSSLCRLDLHNC 614
           CGSD R Y+S C++   NC
Sbjct: 338 CGSDGRLYASPCKMRSSNC 356


>AE014296-1453|AAF50418.2|  662|Drosophila melanogaster CG32354-PA
           protein.
          Length = 662

 Score = 37.1 bits (82), Expect = 0.023
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +3

Query: 510 PDRCVGCPVRGRGEFLCGSDNRTYSSLCRLDLHNCVHRNK 629
           P  C         +++CGSD   YSSLC L + NC  + K
Sbjct: 381 PTECPKSDTDSSSQYVCGSDGNIYSSLCELKMLNCGPQRK 420



 Score = 34.3 bits (75), Expect = 0.16
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +3

Query: 552 FLCGSDNRTYSSLCRLDLHNCVHRNKKPVTLACRRLLSVFLSKAAQKI 695
           F+CGSDN  Y S C +   NC    K    +  +R L+ F  K   +I
Sbjct: 565 FVCGSDNNLYKSECHMRKENC---GKHVFVVPLKRCLAAFQLKGCARI 609



 Score = 32.7 bits (71), Expect = 0.50
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +3

Query: 549 EFLCGSDNRTYSSLCRLDLHNC 614
           E +CGSDN+TY + C L++ NC
Sbjct: 615 EPVCGSDNKTYLNDCFLEIENC 636



 Score = 28.7 bits (61), Expect = 8.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 558 CGSDNRTYSSLCRLDLHNC 614
           CGSD R Y+S C++   NC
Sbjct: 338 CGSDGRLYASPCKMRSSNC 356


>BT003621-1|AAO39624.1|  767|Drosophila melanogaster GH04473p
           protein.
          Length = 767

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 555 LCGSDNRTYSSLCRLDLHNCVHR 623
           +CG +N+TY+S C +  H+C  R
Sbjct: 734 ICGYNNQTYNSWCEMHKHSCESR 756


>AF454393-1|AAL51006.1|  705|Drosophila melanogaster follistatin
           protein.
          Length = 705

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 555 LCGSDNRTYSSLCRLDLHNCVHR 623
           +CG +N+TY+S C +  H+C  R
Sbjct: 672 ICGYNNQTYNSWCEMHKHSCESR 694


>AE013599-2026|AAF58158.2|  767|Drosophila melanogaster CG33466-PA
           protein.
          Length = 767

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 555 LCGSDNRTYSSLCRLDLHNCVHR 623
           +CG +N+TY+S C +  H+C  R
Sbjct: 734 ICGYNNQTYNSWCEMHKHSCESR 756


>BT023691-1|AAY85091.1|   68|Drosophila melanogaster IP03664p
           protein.
          Length = 68

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +3

Query: 528 CPVRGRGEFLCGSDNRTYSSLCRLDLHNCVHRNKKPVTL 644
           CP     + +CGSD+ TYS+ C LD   C+ +  + +T+
Sbjct: 27  CPCPRNYDPVCGSDSVTYSNQCVLD---CLIKEGRSITV 62


>AE014134-2103|AAN10787.1|   68|Drosophila melanogaster CG31704-PA
           protein.
          Length = 68

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +3

Query: 528 CPVRGRGEFLCGSDNRTYSSLCRLDLHNCVHRNKKPVTL 644
           CP     + +CGSD+ TYS+ C LD   C+ +  + +T+
Sbjct: 27  CPCPRNYDPVCGSDSVTYSNQCVLD---CLIKEGRSITV 62


>X54666-1|CAA38477.1|  728|Drosophila melanogaster BRcore-TNT1-Q1-Z1
           protein.
          Length = 728

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = +3

Query: 540 GRGEFLCGSDNRTYSSLCRLDLH-NCVHR--NKKPVTLACRRLLS 665
           G  +F C   N+  SSL RL  H   VH    K+PV   C+R+ S
Sbjct: 633 GGDDFRCNPCNKNLSSLTRLKRHIQNVHMRPTKEPVCNICKRVYS 677


>X54663-1|CAA38474.1|  663|Drosophila melanogaster BRcore-Q1-Z1
           protein.
          Length = 663

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = +3

Query: 540 GRGEFLCGSDNRTYSSLCRLDLH-NCVHR--NKKPVTLACRRLLS 665
           G  +F C   N+  SSL RL  H   VH    K+PV   C+R+ S
Sbjct: 568 GGDDFRCNPCNKNLSSLTRLKRHIQNVHMRPTKEPVCNICKRVYS 612


>AL009146-4|CAA15629.1|  710|Drosophila melanogaster
           EG:17A9.1,FBgn0000210;br protein.
          Length = 710

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = +3

Query: 540 GRGEFLCGSDNRTYSSLCRLDLH-NCVHR--NKKPVTLACRRLLS 665
           G  +F C   N+  SSL RL  H   VH    K+PV   C+R+ S
Sbjct: 615 GGDDFRCNPCNKNLSSLTRLKRHIQNVHMRPTKEPVCNICKRVYS 659


>AE014298-238|AAN09054.1|  663|Drosophila melanogaster CG11491-PG,
           isoform G protein.
          Length = 663

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = +3

Query: 540 GRGEFLCGSDNRTYSSLCRLDLH-NCVHR--NKKPVTLACRRLLS 665
           G  +F C   N+  SSL RL  H   VH    K+PV   C+R+ S
Sbjct: 568 GGDDFRCNPCNKNLSSLTRLKRHIQNVHMRPTKEPVCNICKRVYS 612


>AE014298-237|AAF45648.1|  724|Drosophila melanogaster CG11491-PE,
           isoform E protein.
          Length = 724

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = +3

Query: 540 GRGEFLCGSDNRTYSSLCRLDLH-NCVHR--NKKPVTLACRRLLS 665
           G  +F C   N+  SSL RL  H   VH    K+PV   C+R+ S
Sbjct: 629 GGDDFRCNPCNKNLSSLTRLKRHIQNVHMRPTKEPVCNICKRVYS 673


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,644,307
Number of Sequences: 53049
Number of extensions: 546910
Number of successful extensions: 2360
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2360
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)