Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30344
         (891 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            26   1.3  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    26   1.8  
AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative odorant-b...    25   2.3  
AY748849-1|AAV28195.1|  106|Anopheles gambiae cytochrome P450 pr...    25   4.1  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 207  CWNGCKWR*RWCTIWTSLMPG 269
            CWN  KW  R  + W  L+ G
Sbjct: 2760 CWNPLKWDWRSSSTWIGLLTG 2780


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 7/51 (13%)
 Frame = -1

Query: 882 GNINPWGKKKW---VFLGEKGPPPRVFGKGQFLPPGKFG----PGIPESIW 751
           G++ P G+K     V  GEKG P R    G+  PPG  G    PG+P  +W
Sbjct: 530 GDMGPLGEKGDACPVVKGEKGLPGRPGKTGRDGPPGLTGEKGEPGLP--VW 578



 Score = 25.4 bits (53), Expect = 2.3
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 839 GKRAPPQGFSEKGNFYPPGNLGPGSRK 759
           G+R  P    EKG+  PPG +GP   K
Sbjct: 618 GQRGLPGPQGEKGDQGPPGFIGPKGDK 644


>AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative
           odorant-binding protein OBPjj17 protein.
          Length = 285

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 534 NHQGYFEIPRLRREIFATPNSGYGRTEGYR 623
           N +GY    R+  E +  P  G GRTE  R
Sbjct: 211 NDEGYVRDDRILEEEYDRPYRGRGRTESPR 240


>AY748849-1|AAV28195.1|  106|Anopheles gambiae cytochrome P450
           protein.
          Length = 106

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 173 GVKSCQGQEYFMLEWV*VEVKMV 241
           GV+SC GQ + MLE   V V+++
Sbjct: 78  GVRSCIGQRFAMLEMKTVLVRLL 100


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,056,546
Number of Sequences: 2352
Number of extensions: 24809
Number of successful extensions: 46
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)