Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30343
         (828 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.55 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    25   0.97 
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    24   1.7  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      23   3.9  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   6.8  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   6.8  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    22   6.8  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   9.0  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   9.0  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 25.4 bits (53), Expect = 0.55
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 536  CYLKSTITVCFSVTLNC 486
            C+  S I +C++V LNC
Sbjct: 1115 CFFPSKIRICWNVLLNC 1131


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 24.6 bits (51), Expect = 0.97
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = -1

Query: 624 AVKVSQLLPST*KNLK*IIYGHRDPETIILLSQVNH 517
           +V +  L+    KN++ ++Y +   E  ILL  +NH
Sbjct: 448 SVFICDLIEQKVKNIQMLVYQNEAEEVKILLDVINH 483


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 721 LNFNP*IKIFQILRVTRGARGKVGKKMPFKPNSRKS 614
           +N+NP  K F+    +   R ++  + P  PNS+KS
Sbjct: 191 INYNPFAKGFRENGKSSAKRKQLVSEHPDSPNSKKS 226


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 653 NFAPGPPGYP*NLENFYL 706
           NF  G P    NL+NFYL
Sbjct: 353 NFYYGGPNSENNLDNFYL 370


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 371 YFVVATETTLYLFCLTVTFEI 309
           YF + T+T L +  +TVT+ I
Sbjct: 358 YFTIETKTVLDVLGVTVTYLI 378


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 371 YFVVATETTLYLFCLTVTFEI 309
           YF + T+T L +  +TVT+ I
Sbjct: 284 YFTIETKTVLDVLGVTVTYLI 304


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 558 RDPETIILLSQVNHNSMLFSDPK 490
           +D  TII +  ++HN  ++ DP+
Sbjct: 83  KDTITIIHIYDLHHNPDIYPDPE 105


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 32  YNVLRIQWSLTANHLNLTCMKKQYN 106
           YN  R+  S   N LNLT  K + N
Sbjct: 130 YNESRVMMSPPGNVLNLTMPKYEPN 154


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 32  YNVLRIQWSLTANHLNLTCMKKQYN 106
           YN  R+  S   N LNLT  K + N
Sbjct: 130 YNESRVMMSPPGNVLNLTMPKYEPN 154


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,110
Number of Sequences: 336
Number of extensions: 4159
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)