Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30341
         (792 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   2.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   6.5  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   8.5  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   8.5  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   8.5  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   8.5  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   8.5  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -1

Query: 282 AGLSEDEVVRRKICPKGPERTESMVPGSKSTRMARG 175
           +GL+E+EVV      +GP+  +++   +   R+  G
Sbjct: 84  SGLTEEEVVLSNAIAEGPDAEKALQRAALILRLREG 119


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +2

Query: 35   NQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEA 157
            N+I  + W +  D  G     AYHGD  +  E I    ++A
Sbjct: 911  NRIRNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKA 951


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
 Frame = +2

Query: 407 PSVAAPGP-VWAPSSSQRSVKSTPTES*THTQ*SPAQS 517
           P    P P  W P  S  + + T T S T    +PA S
Sbjct: 426 PVQTTPKPGQWVPEKSTSTTQRTTTVSTTEAPPAPAVS 463


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +2

Query: 608 EALYDICFRNLKLVHTHLRVNLNHLVFPHNVWWHQL 715
           EAL + C +  +     +R  L+HL+     WW +L
Sbjct: 66  EALQNECAKCNEKHKEGVRKVLHHLIKNKPNWWQEL 101


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +1

Query: 616 IRHLLPQSQTCPHPPTGEP*PLSFPSQCLVAPIALRFPGQLNAD 747
           I HL  ++   P P TG    LS  ++C    +    P Q + D
Sbjct: 37  IGHLRFKAPQAPQPWTGIRDALSEGNKCYSKDLLFNLPAQGSED 80


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +1

Query: 616 IRHLLPQSQTCPHPPTGEP*PLSFPSQCLVAPIALRFPGQLNAD 747
           I HL  ++   P P TG    LS  ++C    +    P Q + D
Sbjct: 37  IGHLRFKAPQAPQPWTGIRDALSEGNKCYSKDLLFNLPAQGSED 80


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +1

Query: 616 IRHLLPQSQTCPHPPTGEP*PLSFPSQCLVAPIALRFPGQLNAD 747
           I HL  ++   P P TG    LS  ++C    +    P Q + D
Sbjct: 39  IGHLRFKAPQAPQPWTGIRDALSEGNKCYSKDLLFNLPAQGSED 82


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 247 DLSERSGADRVHGAGLQVDEDGAG 176
           DLS R+G+   H   L + + G G
Sbjct: 199 DLSPRNGSPTDHSPVLNLSKSGGG 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,694
Number of Sequences: 336
Number of extensions: 3932
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)