Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30341
(792 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 120 5e-29
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 120 5e-29
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 120 5e-29
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 120 5e-29
AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein p... 27 0.88
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 24 4.7
AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14... 23 8.2
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 120 bits (289), Expect = 5e-29
Identities = 73/156 (46%), Positives = 89/156 (57%), Gaps = 1/156 (0%)
Frame = +1
Query: 307 HYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 486
HYTEGAELVD+VLDVVRKE E+CDCLQGFQ KIREEYPDRIM
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 487 NTYSVVPCPKY-QTLSSNHTMRLSQFTS*LKTQTKTYCIRQRGSIRHLLPQSQTCPHPPT 663
NTYSVVP PK T+ + LS ++ +TYCI ++ + ++ P+P
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLS-IHQLVENTDETYCI-DNEALYDICFRTLKVPNPSY 118
Query: 664 GEP*PLSFPSQCLVAPIALRFPGQLNADLRKIG*KM 771
G+ L + V LRFPGQLNADLRK+ M
Sbjct: 119 GDLNHLVSLTMSGVT-TCLRFPGQLNADLRKLAVNM 153
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 120 bits (289), Expect = 5e-29
Identities = 73/156 (46%), Positives = 89/156 (57%), Gaps = 1/156 (0%)
Frame = +1
Query: 307 HYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 486
HYTEGAELVD+VLDVVRKE E+CDCLQGFQ KIREEYPDRIM
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 487 NTYSVVPCPKY-QTLSSNHTMRLSQFTS*LKTQTKTYCIRQRGSIRHLLPQSQTCPHPPT 663
NTYSVVP PK T+ + LS ++ +TYCI ++ + ++ P+P
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLS-IHQLVENTDETYCI-DNEALYDICFRTLKVPNPSY 118
Query: 664 GEP*PLSFPSQCLVAPIALRFPGQLNADLRKIG*KM 771
G+ L + V LRFPGQLNADLRK+ M
Sbjct: 119 GDLNHLVSLTMSGVT-TCLRFPGQLNADLRKLAVNM 153
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 120 bits (289), Expect = 5e-29
Identities = 73/156 (46%), Positives = 89/156 (57%), Gaps = 1/156 (0%)
Frame = +1
Query: 307 HYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 486
HYTEGAELVD+VLDVVRKE E+CDCLQGFQ KIREEYPDRIM
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 487 NTYSVVPCPKY-QTLSSNHTMRLSQFTS*LKTQTKTYCIRQRGSIRHLLPQSQTCPHPPT 663
NTYSVVP PK T+ + LS ++ +TYCI ++ + ++ P+P
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLS-IHQLVENTDETYCI-DNEALYDICFRTLKVPNPSY 118
Query: 664 GEP*PLSFPSQCLVAPIALRFPGQLNADLRKIG*KM 771
G+ L + V LRFPGQLNADLRK+ M
Sbjct: 119 GDLNHLVSLTMSGVT-TCLRFPGQLNADLRKLAVNM 153
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 120 bits (289), Expect = 5e-29
Identities = 73/156 (46%), Positives = 89/156 (57%), Gaps = 1/156 (0%)
Frame = +1
Query: 307 HYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 486
HYTEGAELVD+VLDVVRKE E+CDCLQGFQ KIREEYPDRIM
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 487 NTYSVVPCPKY-QTLSSNHTMRLSQFTS*LKTQTKTYCIRQRGSIRHLLPQSQTCPHPPT 663
NTYSVVP PK T+ + LS ++ +TYCI ++ + ++ P+P
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLS-IHQLVENTDETYCI-DNEALYDICFRTLKVPNPSY 118
Query: 664 GEP*PLSFPSQCLVAPIALRFPGQLNADLRKIG*KM 771
G+ L + V LRFPGQLNADLRK+ M
Sbjct: 119 GDLNHLVSLTMSGVT-TCLRFPGQLNADLRKLAVNM 153
>AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein
protein.
Length = 357
Score = 26.6 bits (56), Expect = 0.88
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 374 AIAYRASNLHIPSVAAPGPVWAPSSSQRSVKSTPTES*TH 493
A A+ A+N + AAP + AP+++ S + P + H
Sbjct: 196 ATAFAATNAASVATAAPAAITAPAANAASTAAAPAAATAH 235
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 24.2 bits (50), Expect = 4.7
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -1
Query: 309 VSLGPVVAGAGLSEDEVVRRKICPKGPERTESMVPGSKST 190
+ GP V+G G S+ ++ RK PK + P ST
Sbjct: 1140 MKFGPGVSGPGGSKTPILNRKEKPKSCSVCRQISPTVNST 1179
>AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14D2
protein.
Length = 372
Score = 23.4 bits (48), Expect = 8.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 268 FGQSGAGNNWAKGHYTEGAELVDSVLDVV 354
FG G + G YT +E +D VLD +
Sbjct: 343 FGLEQCGTDGVPGVYTRMSEYMDWVLDTM 371
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 843,082
Number of Sequences: 2352
Number of extensions: 17984
Number of successful extensions: 75
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -