Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30341
(792 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 163 1e-40
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 160 1e-39
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 160 1e-39
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 159 1e-39
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 157 8e-39
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 157 1e-38
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 157 1e-38
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 155 4e-38
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 154 6e-38
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 79 3e-15
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 79 3e-15
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 79 3e-15
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 77 1e-14
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 77 1e-14
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 76 2e-14
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 76 2e-14
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 75 7e-14
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 75 7e-14
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 29 2.7
At4g37190.1 68417.m05265 expressed protein 29 3.5
At1g18700.1 68414.m02333 DNAJ heat shock N-terminal domain-conta... 29 3.5
At2g40820.1 68415.m05038 proline-rich family protein contains pr... 28 6.2
At2g31620.1 68415.m03863 receptor-like protein kinase-related co... 28 8.2
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 163 bits (396), Expect = 1e-40
Identities = 70/85 (82%), Positives = 81/85 (95%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 EIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKYVP 178
EI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+YVP
Sbjct: 3 EILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRYVP 62
Query: 179 RAILVDLEPGTMDSVRSGPFGQIFR 253
RA+L+DLEPGTMDS+RSGP+GQIFR
Sbjct: 63 RAVLMDLEPGTMDSIRSGPYGQIFR 87
Score = 139 bits (336), Expect = 2e-33
Identities = 79/169 (46%), Positives = 98/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 256 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 435
DNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+CDCLQGFQ
Sbjct: 89 DNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGM 148
Query: 436 XXXXXXKIREEYPDRIMNTYSVVPCPKY-QTLSSNHTMRLSQFTS*LKTQTKTYCIRQRG 612
KIREEYPDR+M T+SV P PK T+ + LS L +
Sbjct: 149 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ--LVENADECMVLDNE 206
Query: 613 SIRHLLPQSQTCPHPPTGEP*PLSFPSQCLVAPIALRFPGQLNADLRKI 759
++ + ++ P G+ L + V +LRFPGQLN+DLRK+
Sbjct: 207 ALYDICFRTLKLSTPSFGDLNHLISATMSGVT-CSLRFPGQLNSDLRKL 254
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +3
Query: 504 PLPKVSDTVVEPYNATLSVHQLVENTDENLLHSTTRLY 617
P PKVSDTVVEPYNATLSVHQLVEN DE ++ LY
Sbjct: 172 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALY 209
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/63 (44%), Positives = 33/63 (52%)
Frame = +2
Query: 602 DNEALYDICFRNLKLVHTHLRVNLNHLVFPHNVWWHQLP*GSPVS*TLILEKLAKKWVPF 781
DNEALYDICFR LKL T +LNHL+ + P L KLA +PF
Sbjct: 204 DNEALYDICFRTLKL-STPSFGDLNHLI-SATMSGVTCSLRFPGQLNSDLRKLAVNLIPF 261
Query: 782 PRV 790
PR+
Sbjct: 262 PRL 264
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 160 bits (388), Expect = 1e-39
Identities = 68/84 (80%), Positives = 79/84 (94%)
Frame = +2
Query: 2 EIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPR 181
EI+H+Q GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YVPR
Sbjct: 3 EILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYVPR 62
Query: 182 AILVDLEPGTMDSVRSGPFGQIFR 253
AIL+DLEPGTMDSVR+GP+GQIFR
Sbjct: 63 AILMDLEPGTMDSVRTGPYGQIFR 86
Score = 138 bits (335), Expect = 3e-33
Identities = 79/169 (46%), Positives = 97/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 256 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 435
DNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+CDCLQGFQ
Sbjct: 88 DNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGM 147
Query: 436 XXXXXXKIREEYPDRIMNTYSVVPCPKY-QTLSSNHTMRLSQFTS*LKTQTKTYCIRQRG 612
KIREEYPDR+M T+SV P PK T+ + LS L +
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ--LVENADECMVLDNE 205
Query: 613 SIRHLLPQSQTCPHPPTGEP*PLSFPSQCLVAPIALRFPGQLNADLRKI 759
++ + ++ P G+ L + V LRFPGQLN+DLRK+
Sbjct: 206 ALYDICFRTLKLTTPSFGDLNHLISATMSGVT-CCLRFPGQLNSDLRKL 253
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +3
Query: 504 PLPKVSDTVVEPYNATLSVHQLVENTDENLLHSTTRLY 617
P PKVSDTVVEPYNATLSVHQLVEN DE ++ LY
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALY 208
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/63 (44%), Positives = 33/63 (52%)
Frame = +2
Query: 602 DNEALYDICFRNLKLVHTHLRVNLNHLVFPHNVWWHQLP*GSPVS*TLILEKLAKKWVPF 781
DNEALYDICFR LKL T +LNHL+ + P L KLA +PF
Sbjct: 203 DNEALYDICFRTLKLT-TPSFGDLNHLI-SATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 260
Query: 782 PRV 790
PR+
Sbjct: 261 PRL 263
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 160 bits (388), Expect = 1e-39
Identities = 70/85 (82%), Positives = 79/85 (92%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 EIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKYVP 178
EI+H+Q GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+YVP
Sbjct: 3 EILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRYVP 62
Query: 179 RAILVDLEPGTMDSVRSGPFGQIFR 253
RA+L+DLEPGTMDS+RSGPFGQIFR
Sbjct: 63 RAVLMDLEPGTMDSIRSGPFGQIFR 87
Score = 139 bits (336), Expect = 2e-33
Identities = 79/169 (46%), Positives = 98/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 256 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 435
DNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+CDCLQGFQ
Sbjct: 89 DNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGM 148
Query: 436 XXXXXXKIREEYPDRIMNTYSVVPCPKY-QTLSSNHTMRLSQFTS*LKTQTKTYCIRQRG 612
KIREEYPDR+M T+SV P PK T+ + LS L +
Sbjct: 149 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ--LVENADECMVLDNE 206
Query: 613 SIRHLLPQSQTCPHPPTGEP*PLSFPSQCLVAPIALRFPGQLNADLRKI 759
++ + ++ P G+ L + V +LRFPGQLN+DLRK+
Sbjct: 207 ALYDICFRTLKLSTPSFGDLNHLISATMSGVT-CSLRFPGQLNSDLRKL 254
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +3
Query: 504 PLPKVSDTVVEPYNATLSVHQLVENTDENLLHSTTRLY 617
P PKVSDTVVEPYNATLSVHQLVEN DE ++ LY
Sbjct: 172 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALY 209
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/63 (44%), Positives = 33/63 (52%)
Frame = +2
Query: 602 DNEALYDICFRNLKLVHTHLRVNLNHLVFPHNVWWHQLP*GSPVS*TLILEKLAKKWVPF 781
DNEALYDICFR LKL T +LNHL+ + P L KLA +PF
Sbjct: 204 DNEALYDICFRTLKL-STPSFGDLNHLI-SATMSGVTCSLRFPGQLNSDLRKLAVNLIPF 261
Query: 782 PRV 790
PR+
Sbjct: 262 PRL 264
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 159 bits (387), Expect = 1e-39
Identities = 70/84 (83%), Positives = 78/84 (92%)
Frame = +2
Query: 2 EIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPR 181
EI+H+Q GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYVPR
Sbjct: 3 EILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYVPR 62
Query: 182 AILVDLEPGTMDSVRSGPFGQIFR 253
A+L+DLEPGTMDS+RSGPFGQIFR
Sbjct: 63 AVLMDLEPGTMDSLRSGPFGQIFR 86
Score = 137 bits (332), Expect = 7e-33
Identities = 79/169 (46%), Positives = 97/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 256 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 435
DNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+ DCLQGFQ
Sbjct: 88 DNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENSDCLQGFQVCHSLGGGTGSGM 147
Query: 436 XXXXXXKIREEYPDRIMNTYSVVPCPKY-QTLSSNHTMRLSQFTS*LKTQTKTYCIRQRG 612
KIREEYPDR+M T+SV P PK T+ + LS L +
Sbjct: 148 GTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQ--LVENADECMVLDNE 205
Query: 613 SIRHLLPQSQTCPHPPTGEP*PLSFPSQCLVAPIALRFPGQLNADLRKI 759
++ + ++ +P G+ L + V LRFPGQLN+DLRK+
Sbjct: 206 ALYDICFRTLKLANPTFGDLNHLISATMSGVT-CCLRFPGQLNSDLRKL 253
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +3
Query: 504 PLPKVSDTVVEPYNATLSVHQLVENTDENLLHSTTRLY 617
P PKVSDTVVEPYNATLSVHQLVEN DE ++ LY
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALY 208
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/63 (42%), Positives = 33/63 (52%)
Frame = +2
Query: 602 DNEALYDICFRNLKLVHTHLRVNLNHLVFPHNVWWHQLP*GSPVS*TLILEKLAKKWVPF 781
DNEALYDICFR LKL + +LNHL+ + P L KLA +PF
Sbjct: 203 DNEALYDICFRTLKLANPTFG-DLNHLI-SATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 260
Query: 782 PRV 790
PR+
Sbjct: 261 PRL 263
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 157 bits (381), Expect = 8e-39
Identities = 69/84 (82%), Positives = 77/84 (91%)
Frame = +2
Query: 2 EIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPR 181
EI+H+Q GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYVPR
Sbjct: 3 EILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYVPR 62
Query: 182 AILVDLEPGTMDSVRSGPFGQIFR 253
A+L+DLEPGTMDS+RSGPFGQIFR
Sbjct: 63 AVLMDLEPGTMDSLRSGPFGQIFR 86
Score = 141 bits (342), Expect = 4e-34
Identities = 80/169 (47%), Positives = 98/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 256 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 435
DNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDCLQGFQ
Sbjct: 88 DNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGM 147
Query: 436 XXXXXXKIREEYPDRIMNTYSVVPCPKY-QTLSSNHTMRLSQFTS*LKTQTKTYCIRQRG 612
KIREEYPDR+M T+SV P PK T+ + LS L +
Sbjct: 148 GTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQ--LVENADECMVLDNE 205
Query: 613 SIRHLLPQSQTCPHPPTGEP*PLSFPSQCLVAPIALRFPGQLNADLRKI 759
++ + ++ +P G+ L + V LRFPGQLN+DLRK+
Sbjct: 206 ALYDICFRTLKLANPTFGDLNHLISATMSGVT-CCLRFPGQLNSDLRKL 253
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +3
Query: 504 PLPKVSDTVVEPYNATLSVHQLVENTDENLLHSTTRLY 617
P PKVSDTVVEPYNATLSVHQLVEN DE ++ LY
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALY 208
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/63 (42%), Positives = 33/63 (52%)
Frame = +2
Query: 602 DNEALYDICFRNLKLVHTHLRVNLNHLVFPHNVWWHQLP*GSPVS*TLILEKLAKKWVPF 781
DNEALYDICFR LKL + +LNHL+ + P L KLA +PF
Sbjct: 203 DNEALYDICFRTLKLANPTFG-DLNHLI-SATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 260
Query: 782 PRV 790
PR+
Sbjct: 261 PRL 263
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 157 bits (380), Expect = 1e-38
Identities = 67/84 (79%), Positives = 77/84 (91%)
Frame = +2
Query: 2 EIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPR 181
EI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++VPR
Sbjct: 3 EILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFVPR 62
Query: 182 AILVDLEPGTMDSVRSGPFGQIFR 253
A+L+DLEPGTMDS+RSGP+GQ FR
Sbjct: 63 AVLMDLEPGTMDSLRSGPYGQTFR 86
Score = 140 bits (338), Expect = 1e-33
Identities = 80/169 (47%), Positives = 97/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 256 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 435
DNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDCLQGFQ
Sbjct: 88 DNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGM 147
Query: 436 XXXXXXKIREEYPDRIMNTYSVVPCPKY-QTLSSNHTMRLSQFTS*LKTQTKTYCIRQRG 612
KIREEYPDR+M T+SV P PK T+ + LS L +
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ--LVENADECMVLDNE 205
Query: 613 SIRHLLPQSQTCPHPPTGEP*PLSFPSQCLVAPIALRFPGQLNADLRKI 759
++ + ++ P G+ L + V LRFPGQLN+DLRK+
Sbjct: 206 ALYDICFRTLKLTTPSFGDLNHLISATMSGVT-CCLRFPGQLNSDLRKL 253
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +3
Query: 504 PLPKVSDTVVEPYNATLSVHQLVENTDENLLHSTTRLY 617
P PKVSDTVVEPYNATLSVHQLVEN DE ++ LY
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALY 208
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/63 (44%), Positives = 33/63 (52%)
Frame = +2
Query: 602 DNEALYDICFRNLKLVHTHLRVNLNHLVFPHNVWWHQLP*GSPVS*TLILEKLAKKWVPF 781
DNEALYDICFR LKL T +LNHL+ + P L KLA +PF
Sbjct: 203 DNEALYDICFRTLKLT-TPSFGDLNHLI-SATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 260
Query: 782 PRV 790
PR+
Sbjct: 261 PRL 263
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 157 bits (380), Expect = 1e-38
Identities = 67/84 (79%), Positives = 77/84 (91%)
Frame = +2
Query: 2 EIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPR 181
EI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++VPR
Sbjct: 3 EILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFVPR 62
Query: 182 AILVDLEPGTMDSVRSGPFGQIFR 253
A+L+DLEPGTMDS+RSGP+GQ FR
Sbjct: 63 AVLMDLEPGTMDSLRSGPYGQTFR 86
Score = 140 bits (338), Expect = 1e-33
Identities = 80/169 (47%), Positives = 97/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 256 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 435
DNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDCLQGFQ
Sbjct: 88 DNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGM 147
Query: 436 XXXXXXKIREEYPDRIMNTYSVVPCPKY-QTLSSNHTMRLSQFTS*LKTQTKTYCIRQRG 612
KIREEYPDR+M T+SV P PK T+ + LS L +
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ--LVENADECMVLDNE 205
Query: 613 SIRHLLPQSQTCPHPPTGEP*PLSFPSQCLVAPIALRFPGQLNADLRKI 759
++ + ++ P G+ L + V LRFPGQLN+DLRK+
Sbjct: 206 ALYDICFRTLKLTTPSFGDLNHLISATMSGVT-CCLRFPGQLNSDLRKL 253
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +3
Query: 504 PLPKVSDTVVEPYNATLSVHQLVENTDENLLHSTTRLY 617
P PKVSDTVVEPYNATLSVHQLVEN DE ++ LY
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALY 208
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/63 (44%), Positives = 33/63 (52%)
Frame = +2
Query: 602 DNEALYDICFRNLKLVHTHLRVNLNHLVFPHNVWWHQLP*GSPVS*TLILEKLAKKWVPF 781
DNEALYDICFR LKL T +LNHL+ + P L KLA +PF
Sbjct: 203 DNEALYDICFRTLKLT-TPSFGDLNHLI-SATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 260
Query: 782 PRV 790
PR+
Sbjct: 261 PRL 263
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 155 bits (375), Expect = 4e-38
Identities = 66/84 (78%), Positives = 78/84 (92%)
Frame = +2
Query: 2 EIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPR 181
EI+H+Q GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YVPR
Sbjct: 3 EILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYVPR 62
Query: 182 AILVDLEPGTMDSVRSGPFGQIFR 253
A+L+DLEPGTMDSVRSGP+GQIFR
Sbjct: 63 AVLMDLEPGTMDSVRSGPYGQIFR 86
Score = 140 bits (339), Expect = 1e-33
Identities = 80/169 (47%), Positives = 97/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 256 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 435
DNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDCLQGFQ
Sbjct: 88 DNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGM 147
Query: 436 XXXXXXKIREEYPDRIMNTYSVVPCPKY-QTLSSNHTMRLSQFTS*LKTQTKTYCIRQRG 612
KIREEYPDR+M T+SV P PK T+ + LS L +
Sbjct: 148 GTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQ--LVENADECMVLDNE 205
Query: 613 SIRHLLPQSQTCPHPPTGEP*PLSFPSQCLVAPIALRFPGQLNADLRKI 759
++ + ++ P G+ L + V LRFPGQLN+DLRK+
Sbjct: 206 ALYDICFRTLKLSTPSFGDLNHLISATMSGVT-CCLRFPGQLNSDLRKL 253
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +3
Query: 504 PLPKVSDTVVEPYNATLSVHQLVENTDENLLHSTTRLY 617
P PKVSDTVVEPYNATLSVHQLVEN DE ++ LY
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALY 208
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/63 (44%), Positives = 33/63 (52%)
Frame = +2
Query: 602 DNEALYDICFRNLKLVHTHLRVNLNHLVFPHNVWWHQLP*GSPVS*TLILEKLAKKWVPF 781
DNEALYDICFR LKL T +LNHL+ + P L KLA +PF
Sbjct: 203 DNEALYDICFRTLKL-STPSFGDLNHLI-SATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 260
Query: 782 PRV 790
PR+
Sbjct: 261 PRL 263
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 154 bits (374), Expect = 6e-38
Identities = 65/84 (77%), Positives = 77/84 (91%)
Frame = +2
Query: 2 EIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPR 181
EI+H+Q GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++VPR
Sbjct: 3 EILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFVPR 62
Query: 182 AILVDLEPGTMDSVRSGPFGQIFR 253
A+L+DLEPGTMDSVRSGP+GQIFR
Sbjct: 63 AVLMDLEPGTMDSVRSGPYGQIFR 86
Score = 140 bits (338), Expect = 1e-33
Identities = 80/169 (47%), Positives = 97/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 256 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXX 435
DNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDCLQGFQ
Sbjct: 88 DNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGM 147
Query: 436 XXXXXXKIREEYPDRIMNTYSVVPCPKY-QTLSSNHTMRLSQFTS*LKTQTKTYCIRQRG 612
KIREEYPDR+M T+SV P PK T+ + LS L +
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ--LVENADECMVLDNE 205
Query: 613 SIRHLLPQSQTCPHPPTGEP*PLSFPSQCLVAPIALRFPGQLNADLRKI 759
++ + ++ P G+ L + V LRFPGQLN+DLRK+
Sbjct: 206 ALYDICFRTLKLTTPSFGDLNHLISATMSGVT-CCLRFPGQLNSDLRKL 253
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +3
Query: 504 PLPKVSDTVVEPYNATLSVHQLVENTDENLLHSTTRLY 617
P PKVSDTVVEPYNATLSVHQLVEN DE ++ LY
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALY 208
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/63 (44%), Positives = 33/63 (52%)
Frame = +2
Query: 602 DNEALYDICFRNLKLVHTHLRVNLNHLVFPHNVWWHQLP*GSPVS*TLILEKLAKKWVPF 781
DNEALYDICFR LKL T +LNHL+ + P L KLA +PF
Sbjct: 203 DNEALYDICFRTLKLT-TPSFGDLNHLI-SATMSGVTCCLRFPGQLNSDLRKLAVNLIPF 260
Query: 782 PRV 790
PR+
Sbjct: 261 PRL 263
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 79.4 bits (187), Expect = 3e-15
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 EIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYV 175
EI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK+V
Sbjct: 3 EIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHV 62
Query: 176 PRAILVDLEPGTMDSVRSGPFGQIF 250
PRA+ VDLEP +D VR+G + Q+F
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLF 87
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/98 (29%), Positives = 47/98 (47%)
Frame = +1
Query: 232 TFRTDLPSDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXX 411
T+R + + G+ A NN+A+GHYT G E+VD LD VRK +++C LQGF
Sbjct: 82 TYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAV 141
Query: 412 XXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPCPKYQT 525
++ +Y + +++ P P+ T
Sbjct: 142 GGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVST 179
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +3
Query: 504 PLPKVSDTVVEPYNATLSVHQLVENTDENLLHSTTRLY 617
P P+VS VVEPYN+ LS H L+E+TD +L +Y
Sbjct: 173 PSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIY 210
Score = 31.5 bits (68), Expect = 0.66
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 554 LSSPAS*KHRRKPTAFDNEALYDICFRNLKLVHTHLRVNLNHLV 685
LS+ + +H DNEA+YDIC R+L + NLN L+
Sbjct: 189 LSTHSLLEHTDVAVLLDNEAIYDICRRSLD-IERPTYTNLNRLI 231
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 79.4 bits (187), Expect = 3e-15
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 EIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYV 175
EI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK+V
Sbjct: 3 EIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHV 62
Query: 176 PRAILVDLEPGTMDSVRSGPFGQIF 250
PRA+ VDLEP +D VR+G + Q+F
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLF 87
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/98 (29%), Positives = 47/98 (47%)
Frame = +1
Query: 232 TFRTDLPSDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXX 411
T+R + + G+ A NN+A+GHYT G E+VD LD VRK +++C LQGF
Sbjct: 82 TYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAV 141
Query: 412 XXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPCPKYQT 525
++ +Y + +++ P P+ T
Sbjct: 142 GGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVST 179
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +3
Query: 504 PLPKVSDTVVEPYNATLSVHQLVENTDENLLHSTTRLY 617
P P+VS VVEPYN+ LS H L+E+TD +L +Y
Sbjct: 173 PSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIY 210
Score = 31.5 bits (68), Expect = 0.66
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 554 LSSPAS*KHRRKPTAFDNEALYDICFRNLKLVHTHLRVNLNHLV 685
LS+ + +H DNEA+YDIC R+L + NLN L+
Sbjct: 189 LSTHSLLEHTDVAVLLDNEAIYDICRRSLD-IERPTYTNLNRLI 231
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 79.0 bits (186), Expect = 3e-15
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 EIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYV 175
EI+ + GQ G Q+G WE+ EHGI P G DS + + N +++E S G++V
Sbjct: 3 EIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQHV 62
Query: 176 PRAILVDLEPGTMDSVRSGPFGQIF 250
PRA+ +DLEP +D VR+G + Q+F
Sbjct: 63 PRAVFLDLEPTVIDEVRTGTYRQLF 87
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +1
Query: 232 TFRTDLPSDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 393
T+R + + G+ A NN+A+GHYT G E+VD+ L+ +RK +++C LQGF
Sbjct: 82 TYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNCTGLQGF 135
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +3
Query: 504 PLPKVSDTVVEPYNATLSVHQLVENTDENLLHSTTRLY 617
P P+VS VVEPYN+ LS H L+E+TD +L +Y
Sbjct: 173 PSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIY 210
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 554 LSSPAS*KHRRKPTAFDNEALYDICFRNLKLVHTHLRVNLNHLV 685
LS+ + +H DNEA+YDIC R+L + NLN L+
Sbjct: 189 LSTHSLLEHTDVVVLLDNEAIYDICRRSLD-IERPTYSNLNRLI 231
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 77.0 bits (181), Expect = 1e-14
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 EIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYV 175
E + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK+V
Sbjct: 3 ECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHV 62
Query: 176 PRAILVDLEPGTMDSVRSGPFGQIF 250
PRA+ VDLEP +D VR+G + Q+F
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLF 87
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/98 (29%), Positives = 47/98 (47%)
Frame = +1
Query: 232 TFRTDLPSDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXX 411
T+R + + G+ A NN+A+GHYT G E+VD LD +RK +++C LQGF
Sbjct: 82 TYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 141
Query: 412 XXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPCPKYQT 525
++ +Y + ++V P P+ T
Sbjct: 142 GGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +3
Query: 504 PLPKVSDTVVEPYNATLSVHQLVENTDENLLHSTTRLY 617
P P+VS +VVEPYN+ LS H L+E+TD ++L +Y
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIY 210
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 554 LSSPAS*KHRRKPTAFDNEALYDICFRNLKLVHTHLRVNLNHLV 685
LS+ + +H DNEA+YDIC R+L + NLN LV
Sbjct: 189 LSTHSLLEHTDVSILLDNEAIYDICRRSLN-IERPTYTNLNRLV 231
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 77.0 bits (181), Expect = 1e-14
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 EIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYV 175
E + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK+V
Sbjct: 3 ECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHV 62
Query: 176 PRAILVDLEPGTMDSVRSGPFGQIF 250
PRA+ VDLEP +D VR+G + Q+F
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLF 87
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/98 (29%), Positives = 47/98 (47%)
Frame = +1
Query: 232 TFRTDLPSDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXX 411
T+R + + G+ A NN+A+GHYT G E+VD LD +RK +++C LQGF
Sbjct: 82 TYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 141
Query: 412 XXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPCPKYQT 525
++ +Y + ++V P P+ T
Sbjct: 142 GGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +3
Query: 504 PLPKVSDTVVEPYNATLSVHQLVENTDENLLHSTTRLY 617
P P+VS +VVEPYN+ LS H L+E+TD ++L +Y
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIY 210
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 554 LSSPAS*KHRRKPTAFDNEALYDICFRNLKLVHTHLRVNLNHLV 685
LS+ + +H DNEA+YDIC R+L + NLN LV
Sbjct: 189 LSTHSLLEHTDVSILLDNEAIYDICRRSLN-IERPTYTNLNRLV 231
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 76.2 bits (179), Expect = 2e-14
Identities = 32/83 (38%), Positives = 53/83 (63%)
Frame = +2
Query: 2 EIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPR 181
EI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+PR
Sbjct: 4 EIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIPR 63
Query: 182 AILVDLEPGTMDSVRSGPFGQIF 250
A+L+DLEP ++ +++G + ++
Sbjct: 64 ALLIDLEPRVINGIQNGEYRNLY 86
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +1
Query: 280 GAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKI 459
GAGNNWA G Y +G + + ++D++ +E++ D L+GF +
Sbjct: 99 GAGNNWASG-YHQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETL 157
Query: 460 REEYPDRIMNTYSVVP 507
+ Y +++ TYSV P
Sbjct: 158 NDRYSKKLVQTYSVFP 173
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 513 KVSDTVVEPYNATLSVHQLVENTD 584
+ SD VV+PYN+ L++ +L N D
Sbjct: 177 ETSDVVVQPYNSLLTLKRLTLNAD 200
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 76.2 bits (179), Expect = 2e-14
Identities = 32/83 (38%), Positives = 53/83 (63%)
Frame = +2
Query: 2 EIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPR 181
EI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+PR
Sbjct: 4 EIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIPR 63
Query: 182 AILVDLEPGTMDSVRSGPFGQIF 250
A+L+DLEP ++ +++G + ++
Sbjct: 64 ALLIDLEPRVINGIQNGDYRNLY 86
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +1
Query: 280 GAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKI 459
GAGNNWA G Y +G + + ++D++ +E++ D L+GF +
Sbjct: 99 GAGNNWASG-YHQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETL 157
Query: 460 REEYPDRIMNTYSVVP 507
+ Y +++ TYSV P
Sbjct: 158 NDRYSKKLVQTYSVFP 173
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 513 KVSDTVVEPYNATLSVHQLVENTD 584
+ SD VV+PYN+ L++ +L N D
Sbjct: 177 ETSDVVVQPYNSLLTLKRLTLNAD 200
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 74.5 bits (175), Expect = 7e-14
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 EIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYV 175
E + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+V
Sbjct: 3 ECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHV 62
Query: 176 PRAILVDLEPGTMDSVRSGPFGQIF 250
PRA+ VDLEP +D VR+G + Q+F
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLF 87
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/98 (29%), Positives = 47/98 (47%)
Frame = +1
Query: 232 TFRTDLPSDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXX 411
T+R + + G+ A NN+A+GHYT G E+VD LD +RK +++C LQGF
Sbjct: 82 TYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 141
Query: 412 XXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPCPKYQT 525
++ +Y + ++V P P+ T
Sbjct: 142 GGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +3
Query: 504 PLPKVSDTVVEPYNATLSVHQLVENTDENLLHSTTRLYTTSASAIS 641
P P+VS +VVEPYN+ LS H L+E+TD ++L +Y ++S
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLS 218
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 554 LSSPAS*KHRRKPTAFDNEALYDICFRNLKLVHTHLRVNLNHLV 685
LS+ + +H DNEA+YDIC R+L + NLN LV
Sbjct: 189 LSTHSLLEHTDVSILLDNEAIYDICRRSLS-IERPTYTNLNRLV 231
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 74.5 bits (175), Expect = 7e-14
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 EIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYV 175
E + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+V
Sbjct: 3 ECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHV 62
Query: 176 PRAILVDLEPGTMDSVRSGPFGQIF 250
PRA+ VDLEP +D VR+G + Q+F
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLF 87
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/98 (29%), Positives = 47/98 (47%)
Frame = +1
Query: 232 TFRTDLPSDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXX 411
T+R + + G+ A NN+A+GHYT G E+VD LD +RK +++C LQGF
Sbjct: 82 TYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV 141
Query: 412 XXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPCPKYQT 525
++ +Y + ++V P P+ T
Sbjct: 142 GGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +3
Query: 504 PLPKVSDTVVEPYNATLSVHQLVENTDENLLHSTTRLYTTSASAIS 641
P P+VS +VVEPYN+ LS H L+E+TD ++L +Y ++S
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLS 218
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 554 LSSPAS*KHRRKPTAFDNEALYDICFRNLKLVHTHLRVNLNHLV 685
LS+ + +H DNEA+YDIC R+L + NLN LV
Sbjct: 189 LSTHSLLEHTDVSILLDNEAIYDICRRSLS-IERPTYTNLNRLV 231
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +1
Query: 328 LVDSVLDVVRKESESCDCLQGF 393
+++SV VVRKE+E+C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 29.1 bits (62), Expect = 3.5
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Frame = +2
Query: 2 EIVHLQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG-GK 169
EIV +Q G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 3 EIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGVAT 62
Query: 170 YVPRAILVDLEP--GTMDS 220
Y PR + V+L+ GTM S
Sbjct: 63 YTPRLVSVNLKGALGTMSS 81
>At1g18700.1 68414.m02333 DNAJ heat shock N-terminal
domain-containing protein low similarity to SP|Q9QYI8
DnaJ homolog subfamily B member 7 Mus musculus; contains
Pfam profile PF00226 DnaJ domain
Length = 700
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 664 GEP*PLSFPSQCLVAPIALRFPGQLNAD 747
G P SFP C A +RF G+L+AD
Sbjct: 223 GLPSIFSFPPNCKTADCLIRFEGELSAD 250
>At2g40820.1 68415.m05038 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 903
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = -1
Query: 762 ANFSKISVQLTGEP*GNWCHQTL*GKTKWLRFTRRWVW-------TSLRLRKQMSYRASL 604
+ F+ + Q+ G+ + H GK + ++ +R W+ TS++L + S+ +SL
Sbjct: 401 SEFTVVISQMNGQDHASRSHVFTVGKAR-IKLSRGWITKAREIYSTSMQLYLKFSFSSSL 459
Query: 603 SNAVGFRLC 577
+ V F+LC
Sbjct: 460 NGLVTFQLC 468
>At2g31620.1 68415.m03863 receptor-like protein kinase-related
contains Pfam profile: PF01657 Domain of unknown
function that is usually associated with protein kinase
domain Pfam:PF00069; similar to receptor-like protein
kinase 4 (GI:13506745) and receptor-like protein kinase
5 (GI:13506747) [Arabidopsis thaliana]
Length = 255
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 581 RRKPTAFDNEALYDICFRNLKLVHTHLRVNLNHLVFPHN 697
RR P YD CF + ++T+ +++ H ++ HN
Sbjct: 110 RRCPNNRGRIIWYDNCFLYISEIYTYEKIDFKHYLYLHN 148
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,210,099
Number of Sequences: 28952
Number of extensions: 361631
Number of successful extensions: 1083
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1785055200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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