Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30340
         (850 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D576D8 Cluster: PREDICTED: hypothetical protein;...    38   0.42 
UniRef50_Q7JVV8 Cluster: LP02570p; n=9; melanogaster subgroup|Re...    36   0.97 
UniRef50_Q6BD40 Cluster: CG10200; n=6; Sophophora|Rep: CG10200 -...    36   0.97 
UniRef50_A5ZTP3 Cluster: Putative uncharacterized protein; n=1; ...    36   1.7  
UniRef50_Q5YXI3 Cluster: Putative uncharacterized protein; n=3; ...    34   5.2  
UniRef50_Q6ME89 Cluster: Putative uncharacterized protein; n=1; ...    33   6.9  

>UniRef50_UPI0000D576D8 Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 221

 Score = 37.5 bits (83), Expect = 0.42
 Identities = 19/67 (28%), Positives = 33/67 (49%)
 Frame = +2

Query: 299 IQLIFSVGQYYVPRSYYTIDSDGHESQPVPLRRLRRSLNPYPYSYNQGAEGSADVSGGAL 478
           +  + +    +VP+SYY ID DGH+S  V  R  +R +  +P    +   GS+  S  + 
Sbjct: 13  VSCVLAYSGEFVPKSYYIIDQDGHKSDVVYFRS-KRDVESFPLFRVKRGGGSSSSSQSSA 71

Query: 479 TRIKAKG 499
           +   + G
Sbjct: 72  SSSSSSG 78


>UniRef50_Q7JVV8 Cluster: LP02570p; n=9; melanogaster subgroup|Rep:
           LP02570p - Drosophila melanogaster (Fruit fly)
          Length = 202

 Score = 36.3 bits (80), Expect = 0.97
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +2

Query: 314 SVGQYYVPRSYYTIDSDGHESQPVPLR-RLRRSLNPYPYSYNQGAEGSADVSGGALT 481
           S GQ+ +PR+++T+DS+GH+S   P+   L R L     S +  +  S+   G   T
Sbjct: 20  SAGQF-LPRAFFTLDSEGHQSNVHPVNAHLLRRLRRQSSSSSSSSSSSSSSGGNVFT 75


>UniRef50_Q6BD40 Cluster: CG10200; n=6; Sophophora|Rep: CG10200 -
           Drosophila melanogaster (Fruit fly)
          Length = 162

 Score = 36.3 bits (80), Expect = 0.97
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +2

Query: 314 SVGQYYVPRSYYTIDSDGHESQPVPLR-RLRRSLNPYPYSYNQGAEGSADVSGGALT 481
           S GQ+ +PR+++T+DS+GH+S   P+   L R L     S +  +  S+   G   T
Sbjct: 12  SAGQF-LPRAFFTLDSEGHQSNVHPVNAHLLRRLRRQSSSSSSSSSSSSSSGGNVFT 67


>UniRef50_A5ZTP3 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus obeum ATCC 29174|Rep: Putative
           uncharacterized protein - Ruminococcus obeum ATCC 29174
          Length = 331

 Score = 35.5 bits (78), Expect = 1.7
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
 Frame = -2

Query: 792 LLGLFQ*I-NLPASCKTSMHIYNGWCK--LATDGK*FIKRKILIFNRRKYV--ASRHHVL 628
           L  L+Q I N+PA   +  +++NG C   LA DG   I    +  N+   V   + +   
Sbjct: 33  LFTLYQVIQNIPAYVGSVYNVFNGVCTKILAVDGFTDIINNFITDNKMTRVRQVTENADS 92

Query: 627 AI*FTYIFAVSMPENIQIISEFSGRHTPIANTAA 526
            + F Y  + S  E++Q IS+FSG    I+ TA+
Sbjct: 93  IVDFLYALSPSQWESLQNISQFSGFSDQISKTAS 126


>UniRef50_Q5YXI3 Cluster: Putative uncharacterized protein; n=3;
           Actinomycetales|Rep: Putative uncharacterized protein -
           Nocardia farcinica
          Length = 353

 Score = 33.9 bits (74), Expect = 5.2
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 484 YKGEGTFPSITRSRGSGVGDWGVPAGEFGDNL 579
           Y G+   P+IT S G  +G+W +P G F D+L
Sbjct: 197 YTGDHLLPTITPSIGFELGEWDLPLGRFLDSL 228


>UniRef50_Q6ME89 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Protochlamydia amoebophila UWE25|Rep:
           Putative uncharacterized protein - Protochlamydia
           amoebophila (strain UWE25)
          Length = 823

 Score = 33.5 bits (73), Expect = 6.9
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +2

Query: 314 SVGQYYVPRSYYTIDSDGHESQPVP-LRRLRRSL-NPYPYSYNQGAEGSADVSGGALTRI 487
           S+  + +P+S   +DS+  E + +  LR L R L NP P     G + SA +  G LTR+
Sbjct: 346 SIYYWLIPKSTIVVDSNAMELRTLKDLRTLNRLLANPEPLEGTNGKDISALIKQGTLTRL 405


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 788,763,709
Number of Sequences: 1657284
Number of extensions: 16115607
Number of successful extensions: 38369
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38326
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74603367202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)