Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30340
         (850 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   0.57 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   1.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   3.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   3.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   7.0  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.3  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   9.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   9.3  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   9.3  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 25.4 bits (53), Expect = 0.57
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +1

Query: 583 VLRH*DRKYIGKLNSQNMVTAGYILPSIKNEYFPFY 690
           VLR+  R     LN  N+V  G      KN Y+ FY
Sbjct: 149 VLRNDFRLMSNNLNKNNVVATGRFTFHKKNLYYSFY 184


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/23 (34%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +2

Query: 767 FIYWNKPNNLTFNK-VFTVLKPF 832
           ++YW + +NLT +K ++T  +P+
Sbjct: 23  YLYWQQTSNLTTSKLLYTYRQPY 45


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -3

Query: 74  TTYLVMLHVCNGNA 33
           T Y  M H CNGNA
Sbjct: 332 TLYFRMPHKCNGNA 345


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -3

Query: 74  TTYLVMLHVCNGNA 33
           T Y  M H CNGNA
Sbjct: 339 TLYFRMPHKCNGNA 352


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 197 LTFILCIYVLQLFLIII 147
           L F+LCIY     LII+
Sbjct: 279 LLFLLCIYYFYCALIIL 295


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 752 QLAGRFIYWNKPNNLTFNKVFTVLKPFL 835
           ++AG  I   K  NLT N V  V  P+L
Sbjct: 278 EMAGMRIIAEKFANLTDNSVVGVRAPYL 305


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = -2

Query: 615 TYIFAVSMPENIQIISEFSGRHTPIA 538
           +Y+F++S+ +N Q+ +       P+A
Sbjct: 45  SYLFSLSLAQNNQLFTHHKAPIRPVA 70


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 708 LQAYTIHYRCASMFCNL 758
           L  Y+I+YR  S+F NL
Sbjct: 112 LLGYSINYRRISIFVNL 128


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 797 TFNKVFTVLKPFLG 838
           T ++VFTV  PF+G
Sbjct: 79  TIDRVFTVAIPFVG 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,520
Number of Sequences: 336
Number of extensions: 4223
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)