Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30340
         (850 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X86691-1|CAA60384.1| 1912|Homo sapiens Mi-2 protein protein.           30   9.2  
BC038596-1|AAH38596.1| 1937|Homo sapiens CHD4 protein protein.         30   9.2  

>X86691-1|CAA60384.1| 1912|Homo sapiens Mi-2 protein protein.
          Length = 1912

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -3

Query: 554 GTPQSPTPLPRLLVIDGNVPSP 489
           G P SPTP+PR    D N PSP
Sbjct: 511 GQPPSPTPVPRPPDADPNTPSP 532


>BC038596-1|AAH38596.1| 1937|Homo sapiens CHD4 protein protein.
          Length = 1937

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -3

Query: 554 GTPQSPTPLPRLLVIDGNVPSP 489
           G P SPTP+PR    D N PSP
Sbjct: 508 GQPPSPTPVPRPPDADPNTPSP 529


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,263,376
Number of Sequences: 237096
Number of extensions: 2493304
Number of successful extensions: 5900
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5900
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)