Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30338
(730 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 33 0.18
09_02_0116 + 4420808-4421323,4421367-4421918 33 0.31
07_02_0018 - 11820465-11821508,11822684-11823661 33 0.31
03_05_0890 - 28547462-28547545,28548451-28548528,28548641-285488... 31 0.94
02_03_0315 - 17610605-17610855,17611304-17611370,17612876-176129... 31 1.2
07_03_1107 - 24024387-24024497,24025799-24026410 30 2.2
05_06_0098 + 25560158-25560925 30 2.2
04_03_0544 - 16970746-16970814,16971295-16971693 30 2.2
02_02_0315 + 8872199-8872815,8873141-8873243,8873346-8873405,887... 30 2.2
03_06_0316 + 33091194-33091370,33091451-33092155 29 2.9
01_03_0088 + 12327339-12328092,12329474-12329601,12330249-123304... 29 2.9
08_02_1474 - 27365548-27366054 29 3.8
01_06_0513 - 29944888-29945943 29 3.8
01_01_0844 - 6586345-6586854 29 3.8
09_04_0650 - 19214589-19215106,19215839-19215935,19216100-192161... 29 5.0
09_01_0019 + 403078-404211 29 5.0
07_03_0808 - 21668100-21669092 29 5.0
03_05_0953 + 29111030-29111105,29112250-29113520 29 5.0
11_06_0543 + 24792110-24792229,24792316-24792521,24793770-247944... 28 6.6
08_01_0541 + 4702930-4703328,4703411-4703506,4703601-4703649,470... 28 6.6
07_01_1021 + 8736032-8736106,8736336-8736374,8737362-8737493,873... 28 6.6
05_05_0334 + 24156532-24156565,24156681-24156782,24157145-241572... 28 6.6
04_01_0083 + 904473-905167,905247-905347,905902-905994,907322-90... 28 6.6
03_05_0730 + 27208293-27208813,27209052-27209173,27210429-272104... 28 6.6
02_01_0190 + 1276808-1278214,1278450-1278743,1278815-1279087,127... 28 6.6
01_06_0922 - 33022709-33023545 28 6.6
01_06_0166 + 27145250-27145778,27146062-27146516 28 6.6
09_04_0265 + 16233596-16233752,16234206-16234720,16236199-162362... 28 8.7
06_03_0549 - 22016553-22016573,22016972-22017369,22018059-22018815 28 8.7
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 28 8.7
01_06_0451 - 29476892-29477516,29477600-29477843,29478313-294787... 28 8.7
01_01_0644 - 4878742-4878758,4879134-4879231,4879913-4879935,488... 28 8.7
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 33.5 bits (73), Expect = 0.18
Identities = 26/101 (25%), Positives = 45/101 (44%)
Frame = +1
Query: 196 RPINSPARSRMNDTESSGTAADNLLAVVQSTSTGQRPKARSARTSAHHSPAPALRPAAQN 375
+PI S +++T+ S ++ + + + S + R + SA ++ SP AL+P +
Sbjct: 130 KPIRISGSSTVDNTQRSSRSSASPIRLSPSPRSMSRTRPSSA--ASRSSPPFALQPPTPS 187
Query: 376 YE*SPALRPASLTPRHSLPVPVQKLLAADASPSHRRQPDST 498
+ S +LTP P P L SPS + ST
Sbjct: 188 WRPSTPPSAKTLTPPRRSPSPASTLTPPRRSPSPASRRMST 228
>09_02_0116 + 4420808-4421323,4421367-4421918
Length = 355
Score = 32.7 bits (71), Expect = 0.31
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 283 STSTGQRPKARSARTSAHHSPAPALRPAAQNYE*SPALRPASLTPR-HS-LPVPVQKLLA 456
+T+TG+R R + HS APA P ++ + P PR H+ L VP + L
Sbjct: 5 ATATGRRAALTFRRLFSSHSAAPAPPPLLGHFHHPAPVPPRGCPPRPHTLLTVPAFQPLI 64
Query: 457 ADASPSHRR 483
AS S RR
Sbjct: 65 TAASSSPRR 73
>07_02_0018 - 11820465-11821508,11822684-11823661
Length = 673
Score = 32.7 bits (71), Expect = 0.31
Identities = 32/111 (28%), Positives = 47/111 (42%)
Frame = +1
Query: 154 TAIPTVICKP*NTPRPINSPARSRMNDTESSGTAADNLLAVVQSTSTGQRPKARSARTSA 333
T++P + P P P +P R R S T A +L A+ RP + SA +
Sbjct: 8 TSLPNPLPTPPAHPSPAFNPQRQRERSVPSPTTTASSLRALFLRAVDPSRPASWSAAVAD 67
Query: 334 HHSPAPALRPAAQNYE*SPALRPASLTPRHSLPVPVQKLLAADASPSHRRQ 486
S A+ A + + PA+L P +LP P + AA S + RQ
Sbjct: 68 LLSSGDAV-AALATFAAAVRANPAALRP--ALP-PALRAAAAARSLAAGRQ 114
>03_05_0890 -
28547462-28547545,28548451-28548528,28548641-28548814,
28548902-28548958,28549065-28549116,28549907-28549995,
28550259-28550344,28550427-28550637,28551790-28551882,
28551958-28552098,28552175-28552267,28553879-28554113,
28554263-28554435,28555234-28556571,28556668-28556853,
28557625-28557713,28557756-28557905,28557951-28558596
Length = 1324
Score = 31.1 bits (67), Expect = 0.94
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 163 PTVICKP*NTPRPINSPARSRMNDTESSGTAADNLLAVVQSTSTGQRPKARSARTS-AHH 339
P+ + KP P PI + ++ DT + ++ L + V+STS P +TS H
Sbjct: 560 PSPVPKPPKDPTPIKEESPNKKTDTPPAVSSQAELNSPVESTSHQSLPPKHQHKTSWGHW 619
Query: 340 SPAP 351
S P
Sbjct: 620 SDQP 623
>02_03_0315 -
17610605-17610855,17611304-17611370,17612876-17612941,
17613037-17613158,17613245-17613428,17614262-17614494,
17614580-17614913,17615043-17615186,17615303-17615344
Length = 480
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = +1
Query: 340 SPAPALRPAAQNYE*SPALRPASLTPRHSLPVPVQKLLAADASPSHRRQPDSTT 501
+P PA RPA PA RPA P P P ADA+P S T
Sbjct: 262 APIPATRPA-------PAARPAPPKPEKQSPAPPAPAPVADATPFSSNAESSNT 308
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 29.9 bits (64), Expect = 2.2
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 1/107 (0%)
Frame = +1
Query: 157 AIPTVICKP*NTPRPINSPARSRMNDTESSGTAADNLLAVVQSTSTGQRPKARSARTSAH 336
A PT P TP PA S+ ++ A + A A A
Sbjct: 24 ATPTPAAAPATTP-----PASSKKTPAPAAAPTTTTPPAASTPPAAAPTTPATPAPAEAP 78
Query: 337 HSPAPALRPAAQNYE*-SPALRPASLTPRHSLPVPVQKLLAADASPS 474
+PAP P ++ + +PA + A TP + PV+ +A+ SP+
Sbjct: 79 TTPAPTKAPPTKSTKAPAPAPKAAKATPPPASSPPVEAPVASPPSPA 125
>05_06_0098 + 25560158-25560925
Length = 255
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/73 (30%), Positives = 31/73 (42%)
Frame = +1
Query: 265 LLAVVQSTSTGQRPKARSARTSAHHSPAPALRPAAQNYE*SPALRPASLTPRHSLPVPVQ 444
+L +T QRP A+S HHS AP RP Q ++ + P+ +
Sbjct: 81 MLTGSDTTPPSQRPPAKSNHHQHHHSGAPC-RPKKQAFKLYERRSGVHKNFKMIAPLAMA 139
Query: 445 KLLAADASPSHRR 483
AA AS S R+
Sbjct: 140 AAAAAGASSSPRK 152
>04_03_0544 - 16970746-16970814,16971295-16971693
Length = 155
Score = 29.9 bits (64), Expect = 2.2
Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Frame = +1
Query: 283 STSTGQRPKARSARTSAHHSPAPALRPAAQNYE*SPALRPASLTPRHSLPVPVQKLLAAD 462
S+ G+ P+A +A + P+P PA S R + P P L +
Sbjct: 37 SSRGGRLPEAAAAAVA----PSPPPNPAGGEAASSRGWRLPEAAAAAAAPSPPPDLAEGE 92
Query: 463 ASPSH--RRQPDSTTGNQ*RAAHKHRQEEAHRRPDAVPGR 576
A+ S RRQ TT AA R+ RRP+A GR
Sbjct: 93 AASSRGRRRQLQRTTAAT--AAVPQRRISRGRRPEATQGR 130
>02_02_0315 +
8872199-8872815,8873141-8873243,8873346-8873405,
8873558-8873632,8873718-8873792,8873876-8873956,
8874466-8874657,8874762-8874947,8875047-8875094
Length = 478
Score = 29.9 bits (64), Expect = 2.2
Identities = 28/85 (32%), Positives = 42/85 (49%)
Frame = +1
Query: 178 KP*NTPRPINSPARSRMNDTESSGTAADNLLAVVQSTSTGQRPKARSARTSAHHSPAPAL 357
KP ++P P+ +PA + N++ES A ++ AV P A +A +A P A
Sbjct: 406 KPPSSPSPL-APAEATKNESESESAATESAPAV------NSAPVAEAAPEAA---PPAAP 455
Query: 358 RPAAQNYE*SPALRPASLTPRHSLP 432
RP + Y P L+P S +P S P
Sbjct: 456 RPLSP-YPNYPDLKPPS-SPSPSAP 478
>03_06_0316 + 33091194-33091370,33091451-33092155
Length = 293
Score = 29.5 bits (63), Expect = 2.9
Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Frame = +1
Query: 178 KP*NTPRPINSPARSRMNDTESSGTAADNLLAVVQSTSTGQRPKARSARTSAHHSPAPAL 357
KP P+ PA AA + ++TS R A++A+TSA +P+
Sbjct: 197 KPKAAPKAKAKPAAKPKAKAAPKPKAA--AVTKTKATSAPARRPAKAAKTSAKDTPSKKA 254
Query: 358 RPAAQNYE*SPALRPA-SLTPRHSLPVPVQKLLAADA 465
PAA+ + PA P P +K+ A A
Sbjct: 255 APAAKKPAAAAKKAPAKKAAPAKKAAAPARKVPARKA 291
>01_03_0088 +
12327339-12328092,12329474-12329601,12330249-12330474,
12332638-12332765,12332880-12333033,12333408-12333841
Length = 607
Score = 29.5 bits (63), Expect = 2.9
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Frame = +1
Query: 343 PAPALRPAAQNYE*SPALRPASLTPRHSLPVPVQKLLAADASPSHRRQ-----PDSTTGN 507
P+P+ A + P P P+H P P L +A PS+RR+ P+ TTGN
Sbjct: 9 PSPSRAGRANLFSSPPPPLPNCYDPKHRRPAP-PPLPSARRLPSNRRRRHDQPPNPTTGN 67
Query: 508 Q*RAAHK-HRQEEAHRRP 558
A + A+R+P
Sbjct: 68 GGNPAFRAPHLRTAYRKP 85
>08_02_1474 - 27365548-27366054
Length = 168
Score = 29.1 bits (62), Expect = 3.8
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Frame = -3
Query: 485 WRRWLGDASAASNFCTGTGSEWRGVSDAGRRAGDYS*FCAAGRSAG--AGLWCADVLADR 312
WRR +GD+ + G + RG + GR A CA+G G W DV + R
Sbjct: 88 WRRKIGDSRRSGGAAGGGAAVGRGAAVGGRGARG---GCASGGGGWRLKGWWHRDVRSKR 144
Query: 311 --AFGRCPVLVDCTTAKR 264
G P+ TT R
Sbjct: 145 GGVEGNKPIFCPVTTRVR 162
>01_06_0513 - 29944888-29945943
Length = 351
Score = 29.1 bits (62), Expect = 3.8
Identities = 26/97 (26%), Positives = 39/97 (40%)
Frame = +1
Query: 154 TAIPTVICKP*NTPRPINSPARSRMNDTESSGTAADNLLAVVQSTSTGQRPKARSARTSA 333
T P + +P +P P +P+ M+D + AA L +S+G P RS R
Sbjct: 8 TRRPIHLAEPPLSPEP--NPSSPLMDDGAAPAAAAAAELPSPSPSSSGTSPSPRSKRRRT 65
Query: 334 HHSPAPALRPAAQNYE*SPALRPASLTPRHSLPVPVQ 444
AQ +E +P PA+ T P P +
Sbjct: 66 DRY--------AQGFEFAPRPAPATATATAPAPTPAR 94
>01_01_0844 - 6586345-6586854
Length = 169
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 385 SPALRPASLTPRHS--LPVPVQ-KLLAADASPSHRRQPDSTTGNQ*RAAHKHRQEEAHRR 555
+PA RPA L P+ + LP PV + AADA P +P + A + +E R
Sbjct: 25 APARRPADLPPQAAVLLPEPVDYREAAADAEPLLPPKPVADADAAALAVPEEEEERGPAR 84
Query: 556 PDA 564
P A
Sbjct: 85 PRA 87
>09_04_0650 -
19214589-19215106,19215839-19215935,19216100-19216189,
19216323-19216436,19217126-19217201,19217329-19217618
Length = 394
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 457 ADASPSHRRQPDSTTGNQ*RAAHKHRQEEAHRRPDAVPGRN 579
A+ S + PD+T NQ H HR E++ R V N
Sbjct: 227 AEGLNSPMKLPDATLANQPEKTHCHRDEDSQSRRQLVNDNN 267
>09_01_0019 + 403078-404211
Length = 377
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +1
Query: 472 SHRRQPDST----TGNQ*RAAHKHRQEEAHRRPDAVPGRNGINA 591
SHRR D++ +G + R +HR+ + H R A G +G A
Sbjct: 288 SHRRSDDTSDEDESGGEDRRRRRHRKRQHHHRKGASDGDSGSGA 331
>07_03_0808 - 21668100-21669092
Length = 330
Score = 28.7 bits (61), Expect = 5.0
Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 11/73 (15%)
Frame = +1
Query: 334 HHSPAPALRP---------AAQNYE*SPALR--PASLTPRHSLPVPVQKLLAADASPSHR 480
HH PAP L+P A+ ++ PALR P S PR + P P +A PS
Sbjct: 125 HHYPAPRLQPRARRPRRPRRARGHQHQPALRHLPPSTAPRRTPPPPG----SASPRPSSP 180
Query: 481 RQPDSTTGNQ*RA 519
S TG + R+
Sbjct: 181 ESFSSATGARFRS 193
>03_05_0953 + 29111030-29111105,29112250-29113520
Length = 448
Score = 28.7 bits (61), Expect = 5.0
Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 2/104 (1%)
Frame = +1
Query: 196 RPINSPARSRMNDTESSGTAADNLLAVVQSTSTGQRPKARSARTSAHHSPAPALRPAAQ- 372
+P+++ + ++ G ++ + Q+T+ + R APA+ PAA
Sbjct: 306 KPVDTYLFAVYDEDLKPGKPSEKSFGLFQTTTLAETYPTGLMRNGTAAGLAPAMAPAAAA 365
Query: 373 -NYE*SPALRPASLTPRHSLPVPVQKLLAADASPSHRRQPDSTT 501
P+ PA L + P+Q AA A PS P + T
Sbjct: 366 PTLPVKPSPAPARLPGQQPQVTPLQPGSAAAAGPSALCAPGTAT 409
>11_06_0543 +
24792110-24792229,24792316-24792521,24793770-24794462,
24794538-24794717,24794793-24795084,24795166-24795375
Length = 566
Score = 28.3 bits (60), Expect = 6.6
Identities = 22/73 (30%), Positives = 30/73 (41%)
Frame = +1
Query: 271 AVVQSTSTGQRPKARSARTSAHHSPAPALRPAAQNYE*SPALRPASLTPRHSLPVPVQKL 450
A QS ++ PK R A H P P + + +P P P +PV VQ
Sbjct: 136 AAHQSLASSDPPKKRRRLCKASHMSEP---PPLKKTKKTPL--PNRSEPSLKVPVEVQDH 190
Query: 451 LAADASPSHRRQP 489
+A P R+QP
Sbjct: 191 FIRNARPPARKQP 203
>08_01_0541 +
4702930-4703328,4703411-4703506,4703601-4703649,
4703771-4703865
Length = 212
Score = 28.3 bits (60), Expect = 6.6
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
Frame = +1
Query: 166 TVICKP*NTPRPINSPARSRMNDTE-SSGTAADNLLAVVQSTSTGQRPKARSARTSAHHS 342
T KP P+ SPA + +SG AAD+L + + +S +PK RS + S
Sbjct: 18 TARAKPKPKPKTKPSPASLLSGGSSPASGDAADDL-SFLSPSSPVVKPKPRSPLAAPASS 76
Query: 343 P-APALRPAAQNYE*SPALRPASLTPRHSLPVPVQKL---LAADASPSHRR 483
P +P PA+ + LR + + SL + L A D SH R
Sbjct: 77 PISPYASPASASVSTVADLRILAASHLDSLKRRLDALHGDSARDLEASHSR 127
>07_01_1021 +
8736032-8736106,8736336-8736374,8737362-8737493,
8737848-8737892,8738450-8739157,8740679-8740807,
8741290-8741346,8742937-8742954
Length = 400
Score = 28.3 bits (60), Expect = 6.6
Identities = 30/80 (37%), Positives = 37/80 (46%)
Frame = -3
Query: 581 PFRPGTASGRRWASS*RCLWAARYWLPVVESGWRRWLGDASAASNFCTGTGSEWRGVSDA 402
P R G A GRRWA++ R +GW RW G A+ AS G G+ R + A
Sbjct: 182 PARGGGAVGRRWAAA-RSGDGGDAGGEERGAGW-RWRGSAAGASP-ARGGGAVGRRWAVA 238
Query: 401 GRRAGDYS*FCAAGRSAGAG 342
R+GD A G GAG
Sbjct: 239 --RSGDGG--DAGGEERGAG 254
>05_05_0334 + 24156532-24156565,24156681-24156782,24157145-24157274,
24157361-24157445,24157525-24157666,24157762-24157894,
24157993-24158254,24158331-24158519,24158596-24158721,
24158809-24159195,24159288-24159398,24159629-24160423,
24161114-24161255,24161350-24162518,24162609-24162818,
24163010-24163478,24164037-24164464
Length = 1637
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -3
Query: 488 GWRRWLGDASAASNFCTGTGSEWRGVSDAGRRAGD 384
GW +G S + TG GS W G D G GD
Sbjct: 1541 GWTDNIG--SGGGGWGTGGGSSWAGGGDGGSGGGD 1573
>04_01_0083 +
904473-905167,905247-905347,905902-905994,907322-907968
Length = 511
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +1
Query: 190 TPRPINSPARSRMNDTESSGTAADNLLAVVQSTSTGQRPK--ARSARTSAHHSPAPALRP 363
TP P S + M + T + V T+TG RPK A + T + +P+ + P
Sbjct: 54 TPPPAGSGSHRAMAASSKKSTKQ---VVVAAKTTTGHRPKKAAAAPTTPSRGAPSASAAP 110
Query: 364 AAQNYE 381
+ ++E
Sbjct: 111 VSSSWE 116
>03_05_0730 +
27208293-27208813,27209052-27209173,27210429-27210477,
27210689-27210938,27211474-27211619,27211699-27211846,
27212544-27212612,27212641-27212784
Length = 482
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/61 (32%), Positives = 24/61 (39%)
Frame = +1
Query: 388 PALRPASLTPRHSLPVPVQKLLAADASPSHRRQPDSTTGNQ*RAAHKHRQEEAHRRPDAV 567
P L P +TP LP P L A A RR+ H HR+ +RR A
Sbjct: 3 PLLLPLPVTPPPPLPSPTLTLAPASAP---RRRLVLLAAAAPHHHHHHRRRRVYRRQRAA 59
Query: 568 P 570
P
Sbjct: 60 P 60
>02_01_0190 +
1276808-1278214,1278450-1278743,1278815-1279087,
1279204-1279336,1279425-1279551,1279788-1280284,
1280578-1280642,1280722-1280823,1281020-1281162,
1281761-1281816,1282214-1282869,1282975-1283165,
1283280-1283574,1283738-1283778,1284082-1284104,
1284173-1284369,1284472-1284581,1285309-1285639,
1285968-1286060,1286095-1286166,1286626-1286886
Length = 1788
Score = 28.3 bits (60), Expect = 6.6
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 8/117 (6%)
Frame = +1
Query: 181 P*NTPRPINSPARSRMNDTESSGTAADNLLAVVQSTSTGQRPKARSAR------TSAHHS 342
P +P+P SP+ S T +S +A L ++V T + + S++ S
Sbjct: 82 PAPSPKPSPSPSPSPRRSTSASPSA--TLSSLVSRTFSNNAASSSSSKPLPSLFRGVRPS 139
Query: 343 PAPALRPAAQNYE*SPALRP--ASLTPRHSLPVPVQKLLAADASPSHRRQPDSTTGN 507
P P AA L P A++ R S P++KLL + S S + + GN
Sbjct: 140 PKPGAALAAAAAASRAVLTPHAAAIKSRRSASAPIEKLL-DEGSGSEVSEEFPSAGN 195
>01_06_0922 - 33022709-33023545
Length = 278
Score = 28.3 bits (60), Expect = 6.6
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 1/97 (1%)
Frame = +1
Query: 196 RPINSPARSRMNDTESSGTAADNLLAVVQSTSTGQRPKARSARTSAHHSPAPALRPAAQN 375
R PAR R SG A + ++ + ++RSAR SA P R +
Sbjct: 122 RSPGKPAR-RKRPVSVSGELAHAISRRDRAAAAAYGVRSRSARASASPPPRREQRDRSVR 180
Query: 376 YE*SPALRPASLTPRHSLPVP-VQKLLAADASPSHRR 483
SPA + R + P P +Q+ PS RR
Sbjct: 181 RSPSPAAKRTPEQRRAASPAPSLQRKPPVPVRPSPRR 217
>01_06_0166 + 27145250-27145778,27146062-27146516
Length = 327
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -3
Query: 494 ESGWRRWLGDASAASNFCTGTGSEW-RGVSDAGRRAGD 384
+S W W A A G G +W RGV G GD
Sbjct: 27 DSRWTWWRQAAQGAGLAAAGGGGDWRRGVGRGGEGGGD 64
>09_04_0265 +
16233596-16233752,16234206-16234720,16236199-16236229,
16236559-16237001
Length = 381
Score = 27.9 bits (59), Expect = 8.7
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = -3
Query: 710 SAW-LLAMLKKLSPELRTLWLISDDGSW-----RHLCLE*WCVCITALIPFRPGTASGRR 549
S W +LA+ L PE+ W +D SW R + W + ++ + G A GRR
Sbjct: 70 SRWAMLAVAGILVPEVLEKWGFMEDYSWIDAGARDYFADPWTLFVSQMALM--GWAEGRR 127
Query: 548 WA 543
WA
Sbjct: 128 WA 129
>06_03_0549 - 22016553-22016573,22016972-22017369,22018059-22018815
Length = 391
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -2
Query: 306 WPLPCACGLHHS*KVISRGSATFCIIHSASGRGINRSRRILWFAYD 169
WP PC+ G+H + IS II A G G N++R++ +YD
Sbjct: 247 WPPPCSVGVHFGVRRISE------II--ARGAGENQNRKVKTCSYD 284
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 27.9 bits (59), Expect = 8.7
Identities = 28/116 (24%), Positives = 45/116 (38%)
Frame = +1
Query: 232 DTESSGTAADNLLAVVQSTSTGQRPKARSARTSAHHSPAPALRPAAQNYE*SPALRPASL 411
D E+S AA ++ VV ++ + + SA + R + ++ SPA S
Sbjct: 178 DVEASAGAASTVVVVVAASGKPEAEEEGWGMASAVERREHSRR-SGRSRSRSPARDRGSP 236
Query: 412 TPRHSLPVPVQKLLAADASPSHRRQPDSTTGNQ*RAAHKHRQEEAHRRPDAVPGRN 579
R S P ++ A + RR P TT + + R R P GR+
Sbjct: 237 PRRRSPPARRERSPAPRSRSPRRRSPVKTTSSHRERSPVRRNGSPRRSPVRSIGRS 292
>01_06_0451 -
29476892-29477516,29477600-29477843,29478313-29478714,
29481164-29481358,29481418-29481537,29481615-29481683,
29481901-29481999,29483857-29483946,29484049-29484180,
29485062-29485173
Length = 695
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +1
Query: 313 RSARTSAHHSPAPA---LRPAAQNYE*SPALRPASLTPRHS 426
+ R+ HHSPAPA L P+ N +PA P HS
Sbjct: 227 KHGRSGLHHSPAPAPVGLPPSEGNARGNPAYAPRHPHEYHS 267
>01_01_0644 -
4878742-4878758,4879134-4879231,4879913-4879935,
4880888-4880971,4882011-4882265,4883026-4883615,
4884154-4884331,4884484-4884675,4884792-4884872
Length = 505
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 638 HRHLSATAYAIPVTAFSALQATKPI 712
HR L AT A+P TAF + T P+
Sbjct: 375 HRPLLATTTAVPATAFLISRPTNPV 399
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,236,996
Number of Sequences: 37544
Number of extensions: 575177
Number of successful extensions: 1947
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1940
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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