Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30338
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 33 0.21
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 32 0.48
U80450-10|AAB37834.1| 417|Caenorhabditis elegans Temporarily as... 31 1.1
U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily ass... 31 1.1
U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily ass... 31 1.1
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 30 1.9
AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical ... 30 1.9
Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 2.6
U55854-1|AAA98010.2| 418|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical... 29 2.6
AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical... 29 2.6
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 29 3.4
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 28 5.9
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 28 5.9
U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 33.1 bits (72), Expect = 0.21
Identities = 28/104 (26%), Positives = 44/104 (42%)
Frame = +1
Query: 178 KP*NTPRPINSPARSRMNDTESSGTAADNLLAVVQSTSTGQRPKARSARTSAHHSPAPAL 357
KP P P N+ + ESS ++D+ ++P A+ TSA +P PA
Sbjct: 505 KPAAKPTPANATPKPVAKKAESSSDSSDD----------EKKPVAKP--TSAKATPKPAA 552
Query: 358 RPAAQNYE*SPALRPASLTPRHSLPVPVQKLLAADASPSHRRQP 489
+ A + + S PA TP + P P K + + S +P
Sbjct: 553 KKADLSSDFSDDEAPAKKTPAKAAPKPASKKAESSSDSSDDEKP 596
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = +1
Query: 283 STSTGQRPKARSARTSAHHSPAPALRPAAQNYE*SPALRPASLTPRHSLPVPVQKLLAAD 462
S S+ K + TSA +P PA + A + + S PA TP + P P K +
Sbjct: 406 SDSSDDEKKPVAKPTSAKATPKPAAKKADSSSDSSDDEAPAKKTPAKAAPKPASKKAESS 465
Query: 463 ASPSHRRQP 489
+ S +P
Sbjct: 466 SDSSDDEKP 474
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 283 STSTGQRPKARSARTSAHHSPAPALRPAAQNYE*SPALRPAS-LTPRHSLPVPVQKLLAA 459
S+S +A + +T A +P PA + A + + S +PA+ TP P P K +A+
Sbjct: 435 SSSDSSDDEAPAKKTPAKAAPKPASKKAESSSDSSDDEKPAAKSTPAKITPKPTAKKVAS 494
Query: 460 DASPS 474
+S S
Sbjct: 495 SSSDS 499
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/94 (24%), Positives = 40/94 (42%)
Frame = +1
Query: 283 STSTGQRPKARSARTSAHHSPAPALRPAAQNYE*SPALRPASLTPRHSLPVPVQKLLAAD 462
S+ ++P A+ A A +P PA + A + + S PA TP + P PV K +
Sbjct: 255 SSDDEKKPVAKPAPAKA--TPKPAAKKADSSSDSSDDEAPAKKTPAKAAPKPVAKKAESS 312
Query: 463 ASPSHRRQPDSTTGNQ*RAAHKHRQEEAHRRPDA 564
+ S + + +A K ++A D+
Sbjct: 313 SDSSDDEKKPAAKPTPAKATPKPVAKKAESSSDS 346
Score = 29.9 bits (64), Expect = 1.9
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = +1
Query: 214 ARSRMNDTESSGTAADNLLAVVQSTSTGQRPKARSARTSAHHSPAPALRPAAQNYE*SPA 393
A+S T TA + S+ ++P A+ TSA +P PA + A + + S
Sbjct: 598 AKSTPAKTTPKPTAKKAASSSSDSSDDEKKPVAKP--TSAKATPKPAAKKADSSSDSSDD 655
Query: 394 LRPASLTPRHSLPVPV--QKLLAADASPSHRRQPDSTT 501
PA TP PV + +K+ ++ S ++P T
Sbjct: 656 EAPAKKTPVKPTPVKIVAKKVDSSSDSSDDEKKPTKAT 693
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 31.9 bits (69), Expect = 0.48
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = +1
Query: 283 STSTGQRPKARSARTSAHHSPAPALRPAAQNYE*SPALRPASLTPRHSLPVPVQKLLAAD 462
S S+ K + TSA +P PA + A + + S PA TP + P P K +
Sbjct: 253 SDSSDDEKKPVAKPTSAKATPKPAAKKADLSSDFSDDEAPAKKTPAKAAPKPASKKAESS 312
Query: 463 ASPSHRRQP 489
+ S +P
Sbjct: 313 SDSSDDEKP 321
Score = 29.9 bits (64), Expect = 1.9
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = +1
Query: 214 ARSRMNDTESSGTAADNLLAVVQSTSTGQRPKARSARTSAHHSPAPALRPAAQNYE*SPA 393
A+S T TA + S+ ++P A+ TSA +P PA + A + + S
Sbjct: 323 AKSTPAKTTPKPTAKKAASSSSDSSDDEKKPVAKP--TSAKATPKPAAKKADSSSDSSDD 380
Query: 394 LRPASLTPRHSLPVPV--QKLLAADASPSHRRQPDSTT 501
PA TP PV + +K+ ++ S ++P T
Sbjct: 381 EAPAKKTPVKPTPVKIVAKKVDSSSDSSDDEKKPTKAT 418
>U80450-10|AAB37834.1| 417|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform b protein.
Length = 417
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 560 MLYQVGTVSMLLYTRTIIPDKDDAKNHRHLSAT 658
++YQ ++ L T+ ++PD D A HLSAT
Sbjct: 231 LVYQHSITALALPTKLVLPDFDPAATPEHLSAT 263
>U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily assigned
gene nameprotein 163, isoform a protein.
Length = 1112
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 560 MLYQVGTVSMLLYTRTIIPDKDDAKNHRHLSAT 658
++YQ ++ L T+ ++PD D A HLSAT
Sbjct: 926 LVYQHSITALALPTKLVLPDFDPAATPEHLSAT 958
>U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform c protein.
Length = 949
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 560 MLYQVGTVSMLLYTRTIIPDKDDAKNHRHLSAT 658
++YQ ++ L T+ ++PD D A HLSAT
Sbjct: 763 LVYQHSITALALPTKLVLPDFDPAATPEHLSAT 795
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +1
Query: 187 NTPRPINSPARSRMNDTESSGTAADNLLAVVQSTST-GQRPKARSARTSAHHSPAPALRP 363
+TP P +PA + ++++ T+ N S S P + SA T+ H PA ++
Sbjct: 579 STPAPSTTPAPQAASSSQAAPTSGANTQPATPSASNQPPTPASASASTTLHVEPA-SVAG 637
Query: 364 AAQNYE*SPALRPASLTPRHSLPVPVQKLLAADA 465
+Q +P+ P S +P AADA
Sbjct: 638 GSQAGSRAPSAGPGPSATPDSSTIP-SASAAADA 670
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 29.9 bits (64), Expect = 1.9
Identities = 26/97 (26%), Positives = 41/97 (42%)
Frame = +1
Query: 220 SRMNDTESSGTAADNLLAVVQSTSTGQRPKARSARTSAHHSPAPALRPAAQNYE*SPALR 399
+RM ++SS T + N+ S S+ R + HH P P P QN+ P
Sbjct: 1584 TRMTMSQSS-TKSSNV-----SVSSRHRDNQSAPPRHHHHQPHPPHHPHLQNHYHPPQNH 1637
Query: 400 PASLTPRHSLPVPVQKLLAADASPSHRRQPDSTTGNQ 510
++ P S V +Q + + +P H QP +Q
Sbjct: 1638 TSATAPCPSAMVQLQAVSNNNVNPLH--QPPHPVSSQ 1672
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 29.9 bits (64), Expect = 1.9
Identities = 26/97 (26%), Positives = 41/97 (42%)
Frame = +1
Query: 220 SRMNDTESSGTAADNLLAVVQSTSTGQRPKARSARTSAHHSPAPALRPAAQNYE*SPALR 399
+RM ++SS T + N+ S S+ R + HH P P P QN+ P
Sbjct: 1745 TRMTMSQSS-TKSSNV-----SVSSRHRDNQSAPPRHHHHQPHPPHHPHLQNHYHPPQNH 1798
Query: 400 PASLTPRHSLPVPVQKLLAADASPSHRRQPDSTTGNQ 510
++ P S V +Q + + +P H QP +Q
Sbjct: 1799 TSATAPCPSAMVQLQAVSNNNVNPLH--QPPHPVSSQ 1833
>AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical
protein Y37H9A.3 protein.
Length = 792
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = +1
Query: 304 PKARSARTSAHHSPAPALRPAAQNYE*SPALRPASLTPRHSLPVPVQKLLAADASPS 474
P A +A+ AHH PAP +R AA E SP P + S P P A P+
Sbjct: 207 PPAPTAQP-AHHPPAPPIRQAAHAAESSP---PPIPQRKSSAPAPTAAAPPATKEPT 259
>Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 220 SRMNDTESSGTAADNLLA-VVQSTSTGQRPKARSARTSAHHSPAPALRPAAQNYE*SPAL 396
SRM + SG + +Q +S P+A+ R+S+ P L+P E SP +
Sbjct: 164 SRMQELMISGHSPHEARQQTIQESSEQLEPRAKVTRSSSQPPPIDTLKPRVPRIE-SPLV 222
Query: 397 RPASLTP 417
+ + TP
Sbjct: 223 KKTTETP 229
>Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 220 SRMNDTESSGTAADNLLA-VVQSTSTGQRPKARSARTSAHHSPAPALRPAAQNYE*SPAL 396
SRM + SG + +Q +S P+A+ R+S+ P L+P E SP +
Sbjct: 162 SRMQELMISGHSPHEARQQTIQESSEQLEPRAKVTRSSSQPPPIDTLKPRVPRIE-SPLV 220
Query: 397 RPASLTP 417
+ + TP
Sbjct: 221 KKTTETP 227
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/92 (25%), Positives = 32/92 (34%)
Frame = +1
Query: 283 STSTGQRPKARSARTSAHHSPAPALRPAAQNYE*SPALRPASLTPRHSLPVPVQKLLAAD 462
S S P R S SPAP + +PA R S + S P ++ +
Sbjct: 309 SASKSPPPARRRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKSRS 368
Query: 463 ASPSHRRQPDSTTGNQ*RAAHKHRQEEAHRRP 558
SP RR+ + A + R R P
Sbjct: 369 KSPPARRRRSPSASKSPPAPRRRRSPSKSRSP 400
>U55854-1|AAA98010.2| 418|Caenorhabditis elegans Hypothetical
protein C04G6.4 protein.
Length = 418
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 262 NLLAVVQSTST-GQRPKARSARTSAHHSPAPALRPAAQNYE*SPALRPASLTPRHSLPVP 438
N+ +++Q T+T G+ K++ A+ S P P P + +P + S P +P
Sbjct: 34 NIASLLQKTNTTGEDVKSKDAQPSVTPVPPPTFNPVPNPF--APRPKSVSPNPHPDVPAV 91
Query: 439 VQKLLAADASPS 474
L+A A S
Sbjct: 92 TVGALSAPADKS 103
>AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 220 SRMNDTESSGTAADNLLA-VVQSTSTGQRPKARSARTSAHHSPAPALRPAAQNYE*SPAL 396
SRM + SG + +Q +S P+A+ R+S+ P L+P E SP +
Sbjct: 164 SRMQELMISGHSPHEARQQTIQESSEQLEPRAKVTRSSSQPPPIDTLKPRVPRIE-SPLV 222
Query: 397 RPASLTP 417
+ + TP
Sbjct: 223 KKTTETP 229
>AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 220 SRMNDTESSGTAADNLLA-VVQSTSTGQRPKARSARTSAHHSPAPALRPAAQNYE*SPAL 396
SRM + SG + +Q +S P+A+ R+S+ P L+P E SP +
Sbjct: 162 SRMQELMISGHSPHEARQQTIQESSEQLEPRAKVTRSSSQPPPIDTLKPRVPRIE-SPLV 220
Query: 397 RPASLTP 417
+ + TP
Sbjct: 221 KKTTETP 227
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
protein K08E7.5a protein.
Length = 1221
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Frame = +1
Query: 235 TESSGTAADNLLAVVQSTSTGQRPKARSA-------RTSAHHSPAPALRPAAQNYE*SPA 393
T++SGT + N L Q T+ AR+ T+ HH P + A + E SP
Sbjct: 414 TKASGTKSPNSLQAPQQTAAHLMKNARAPGPEPSLHSTTTHHVQTPIITIAPKFSEPSPY 473
Query: 394 LRPASLTPRHS 426
LTP+ +
Sbjct: 474 AENIMLTPKQA 484
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 506 LPVVESGWRRWLGDASAASNFCTGTGS 426
LP +GW R+L D + F TGT S
Sbjct: 820 LPFQSNGWFRYLADNDSHVQFVTGTAS 846
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 28.3 bits (60), Expect = 5.9
Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 5/100 (5%)
Frame = +1
Query: 190 TPRPIN-SPARSRMNDTESSGTAADNLLAVVQSTSTGQRP--KARSARTSAHHSPAPALR 360
TP P S A N +S+G A A + P A SA T+A +
Sbjct: 294 TPAPETVSAAPEAANSYDSAGGDAATAPAPSSEAADAAAPTDSAASADTTAALVDTSSSE 353
Query: 361 PAAQNYE*SPA--LRPASLTPRHSLPVPVQKLLAADASPS 474
AA++ E +PA + TP S+P PV A SPS
Sbjct: 354 HAAESTE-APATDIAATETTPAPSVPAPVADAAAGYDSPS 392
>U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical
protein T22F7.1 protein.
Length = 510
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -3
Query: 326 VLADRAFGRCPVLVDCTTAKRLSAAVPLLSVSFILLLAGELI 201
V+ADR FGR P+++ C + ++ L+ +F LLL I
Sbjct: 149 VVADR-FGRRPIIIICLLLTGIVGSLGSLAPNFPLLLVARFI 189
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,267,715
Number of Sequences: 27780
Number of extensions: 420907
Number of successful extensions: 1266
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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