Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30337
(504 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT006840-1|AAP35486.1| 370|Homo sapiens phosphoserine aminotran... 96 7e-20
BC018129-1|AAH18129.1| 370|Homo sapiens phosphoserine aminotran... 96 7e-20
BC016645-1|AAH16645.1| 370|Homo sapiens phosphoserine aminotran... 96 7e-20
BC004863-1|AAH04863.1| 370|Homo sapiens phosphoserine aminotran... 96 7e-20
BC000971-1|AAH00971.1| 370|Homo sapiens phosphoserine aminotran... 96 7e-20
AY131232-1|AAN71736.1| 370|Homo sapiens phosphoserine aminotran... 96 7e-20
AL353594-1|CAI16882.1| 370|Homo sapiens phosphoserine aminotran... 96 7e-20
AL353594-2|CAI16883.1| 324|Homo sapiens phosphoserine aminotran... 52 1e-06
AF113132-1|AAD42052.1| 324|Homo sapiens phosphoserine aminotran... 52 1e-06
>BT006840-1|AAP35486.1| 370|Homo sapiens phosphoserine
aminotransferase protein.
Length = 370
Score = 95.9 bits (228), Expect = 7e-20
Identities = 46/87 (52%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 AIYIMGRVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFR 180
+IY+MG VL+WI+ NGG M +L++ K+ IY I+ S GFY PV RSKMN+PFR
Sbjct: 247 SIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFR 306
Query: 181 IG-CPGDDALEKEFLKGAETLGLIQLK 258
IG GDDALEK FL A L ++ LK
Sbjct: 307 IGNAKGDDALEKRFLDKALELNMLSLK 333
Score = 62.5 bits (145), Expect = 8e-10
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +3
Query: 204 LRKRILEGC*DFGTYSAKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKH 362
L KR L+ + S KGHR VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 316 LEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 368
>BC018129-1|AAH18129.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 95.9 bits (228), Expect = 7e-20
Identities = 46/87 (52%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 AIYIMGRVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFR 180
+IY+MG VL+WI+ NGG M +L++ K+ IY I+ S GFY PV RSKMN+PFR
Sbjct: 247 SIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFR 306
Query: 181 IG-CPGDDALEKEFLKGAETLGLIQLK 258
IG GDDALEK FL A L ++ LK
Sbjct: 307 IGNAKGDDALEKRFLDKALELNMLSLK 333
Score = 62.5 bits (145), Expect = 8e-10
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +3
Query: 204 LRKRILEGC*DFGTYSAKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKH 362
L KR L+ + S KGHR VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 316 LEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 368
>BC016645-1|AAH16645.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 95.9 bits (228), Expect = 7e-20
Identities = 46/87 (52%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 AIYIMGRVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFR 180
+IY+MG VL+WI+ NGG M +L++ K+ IY I+ S GFY PV RSKMN+PFR
Sbjct: 247 SIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFR 306
Query: 181 IG-CPGDDALEKEFLKGAETLGLIQLK 258
IG GDDALEK FL A L ++ LK
Sbjct: 307 IGNAKGDDALEKRFLDKALELNMLSLK 333
Score = 62.5 bits (145), Expect = 8e-10
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +3
Query: 204 LRKRILEGC*DFGTYSAKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKH 362
L KR L+ + S KGHR VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 316 LEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 368
>BC004863-1|AAH04863.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 95.9 bits (228), Expect = 7e-20
Identities = 46/87 (52%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 AIYIMGRVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFR 180
+IY+MG VL+WI+ NGG M +L++ K+ IY I+ S GFY PV RSKMN+PFR
Sbjct: 247 SIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFR 306
Query: 181 IG-CPGDDALEKEFLKGAETLGLIQLK 258
IG GDDALEK FL A L ++ LK
Sbjct: 307 IGNAKGDDALEKRFLDKALELNMLSLK 333
Score = 62.5 bits (145), Expect = 8e-10
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +3
Query: 204 LRKRILEGC*DFGTYSAKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKH 362
L KR L+ + S KGHR VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 316 LEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 368
>BC000971-1|AAH00971.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 95.9 bits (228), Expect = 7e-20
Identities = 46/87 (52%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 AIYIMGRVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFR 180
+IY+MG VL+WI+ NGG M +L++ K+ IY I+ S GFY PV RSKMN+PFR
Sbjct: 247 SIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFR 306
Query: 181 IG-CPGDDALEKEFLKGAETLGLIQLK 258
IG GDDALEK FL A L ++ LK
Sbjct: 307 IGNAKGDDALEKRFLDKALELNMLSLK 333
Score = 62.5 bits (145), Expect = 8e-10
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +3
Query: 204 LRKRILEGC*DFGTYSAKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKH 362
L KR L+ + S KGHR VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 316 LEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 368
>AY131232-1|AAN71736.1| 370|Homo sapiens phosphoserine
aminotransferase protein.
Length = 370
Score = 95.9 bits (228), Expect = 7e-20
Identities = 46/87 (52%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 AIYIMGRVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFR 180
+IY+MG VL+WI+ NGG M +L++ K+ IY I+ S GFY PV RSKMN+PFR
Sbjct: 247 SIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFR 306
Query: 181 IG-CPGDDALEKEFLKGAETLGLIQLK 258
IG GDDALEK FL A L ++ LK
Sbjct: 307 IGNAKGDDALEKRFLDKALELNMLSLK 333
Score = 62.5 bits (145), Expect = 8e-10
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +3
Query: 204 LRKRILEGC*DFGTYSAKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKH 362
L KR L+ + S KGHR VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 316 LEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 368
>AL353594-1|CAI16882.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 95.9 bits (228), Expect = 7e-20
Identities = 46/87 (52%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 AIYIMGRVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFR 180
+IY+MG VL+WI+ NGG M +L++ K+ IY I+ S GFY PV RSKMN+PFR
Sbjct: 247 SIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFR 306
Query: 181 IG-CPGDDALEKEFLKGAETLGLIQLK 258
IG GDDALEK FL A L ++ LK
Sbjct: 307 IGNAKGDDALEKRFLDKALELNMLSLK 333
Score = 62.5 bits (145), Expect = 8e-10
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +3
Query: 204 LRKRILEGC*DFGTYSAKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKH 362
L KR L+ + S KGHR VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 316 LEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 368
>AL353594-2|CAI16883.1| 324|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 324
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +1
Query: 1 AIYIMGRVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFY 129
+IY+MG VL+WI+ NGG M +L++ K+ IY I+ S GFY
Sbjct: 247 SIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFY 289
Score = 46.0 bits (104), Expect = 8e-05
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +3
Query: 270 VGGIRASIYNAVTLEEVQALVQYMEEFYKKH 362
VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 292 VGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 322
>AF113132-1|AAD42052.1| 324|Homo sapiens phosphoserine
aminotransferase protein.
Length = 324
Score = 52.0 bits (119), Expect = 1e-06
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +1
Query: 1 AIYIMGRVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFY 129
+IY+MG VL+WI+ NGG M +L++ K+ IY I+ S GFY
Sbjct: 247 SIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFY 289
Score = 46.0 bits (104), Expect = 8e-05
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +3
Query: 270 VGGIRASIYNAVTLEEVQALVQYMEEFYKKH 362
VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 292 VGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 322
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,615,542
Number of Sequences: 237096
Number of extensions: 1522710
Number of successful extensions: 2628
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2604
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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