Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30337
(504 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g35630.1 68417.m05060 phosphoserine aminotransferase, chlorop... 73 1e-13
At2g17630.1 68415.m02039 phosphoserine aminotransferase, putativ... 68 3e-12
At5g52860.1 68418.m06561 ABC transporter family protein 29 1.3
At5g58150.1 68418.m07278 leucine-rich repeat transmembrane prote... 29 1.8
At2g38365.1 68415.m04713 expressed protein 29 1.8
At1g50370.1 68414.m05646 serine/threonine protein phosphatase, p... 29 1.8
At5g49660.1 68418.m06147 leucine-rich repeat transmembrane prote... 28 3.1
At4g25750.1 68417.m03707 ABC transporter family protein Bactroce... 28 3.1
At3g19930.1 68416.m02523 sugar transport protein (STP4) identica... 28 4.1
At5g55830.1 68418.m06957 lectin protein kinase, putative similar... 27 5.4
At4g33080.1 68417.m05678 protein kinase, putative contains prote... 27 5.4
At2g42500.2 68415.m05259 serine/threonine protein phosphatase PP... 27 5.4
At2g42500.1 68415.m05258 serine/threonine protein phosphatase PP... 27 5.4
At3g58500.1 68416.m06520 serine/threonine protein phosphatase PP... 27 7.2
At5g37210.1 68418.m04468 DC1 domain-containing protein contains ... 27 9.5
At2g33170.1 68415.m04064 leucine-rich repeat transmembrane prote... 27 9.5
At1g62640.1 68414.m07067 3-oxoacyl-[acyl-carrier-protein] syntha... 27 9.5
At1g28640.1 68414.m03527 GDSL-motif lipase, putative strong simi... 27 9.5
>At4g35630.1 68417.m05060 phosphoserine aminotransferase,
chloroplast (PSAT) identical to Phosphoserine
aminotransferase, chloroplast precursor (PSAT)
(SP:Q96255)[Arabidopsis thaliana]; contains TIGRFAM
TIGR01364: phosphoserine aminotransferase; contains Pfam
PF00266: aminotransferase, class V
Length = 430
Score = 72.5 bits (170), Expect = 1e-13
Identities = 38/85 (44%), Positives = 53/85 (62%)
Frame = +1
Query: 4 IYIMGRVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRI 183
IY+ G V + + GGL+ + + +KA L+YN IE+SNGF+ PV K+VRS MNVPF +
Sbjct: 313 IYMCGLVFEDLLEQGGLKEVEKKNQRKADLLYNAIEESNGFFRCPVEKSVRSLMNVPFTL 372
Query: 184 GCPGDDALEKEFLKGAETLGLIQLK 258
LE EF+K A ++QLK
Sbjct: 373 ---EKSELEAEFIKEAAKEKMVQLK 394
Score = 51.2 bits (117), Expect = 4e-07
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +3
Query: 255 KGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKHS 365
KGHR VGG+RASIYNA+ L V+ LV +M++F KH+
Sbjct: 394 KGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAKHA 430
>At2g17630.1 68415.m02039 phosphoserine aminotransferase, putative
similar to Phosphoserine aminotransferase, chloroplast
precursor (PSAT) (SP:Q96255) [Arabidopsis thaliana];
contains TIGRFAM TIGR01364: phosphoserine
aminotransferase; contains Pfam PF00266:
aminotransferase, class V
Length = 422
Score = 68.1 bits (159), Expect = 3e-12
Identities = 36/85 (42%), Positives = 51/85 (60%)
Frame = +1
Query: 4 IYIMGRVLQWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRI 183
IY+ G V + GGL+ + + +KA L+YN I++S GF+ PV K+VRS MNVPF +
Sbjct: 305 IYMCGLVFDDLLEQGGLKEVEKKNQRKAELLYNAIDESRGFFRCPVEKSVRSLMNVPFTL 364
Query: 184 GCPGDDALEKEFLKGAETLGLIQLK 258
LE EF+K A ++QLK
Sbjct: 365 ---EKSELEAEFIKEAAKEKMVQLK 386
Score = 50.0 bits (114), Expect = 9e-07
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = +3
Query: 255 KGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKHS 365
KGHR VGG+RASIYNA+ L V+ LV +M++F +H+
Sbjct: 386 KGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQARHA 422
>At5g52860.1 68418.m06561 ABC transporter family protein
Length = 589
Score = 29.5 bits (63), Expect = 1.3
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Frame = +1
Query: 193 GDDALEKEFLKGAETLGLIQLKDTETLAVFV---PQYIMQ*P*RRFKLSFSTWRSSIKNI 363
G +EK F A TL + TETL +F+ P + + ++LS +++ +
Sbjct: 355 GKAGIEKRFGMFAFTLTFLLSSTTETLPIFINERPILLRETSSGIYRLSSHILANTLVFL 414
Query: 364 PSKY--C*IYTSNIYFLYVI---WNLLFYIVVLIYV 456
P + IY+ ++YFL + W Y V++I++
Sbjct: 415 PYLFVISIIYSVSVYFLIGLCPTWQAFGYFVLVIWI 450
>At5g58150.1 68418.m07278 leucine-rich repeat transmembrane protein
kinase, putative
Length = 785
Score = 29.1 bits (62), Expect = 1.8
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 33 DSKEWRIRRNVSIGNKESLTYLQH 104
DS WR+R +++G +L +L H
Sbjct: 612 DSAPWRLRHKIALGTARALAFLHH 635
>At2g38365.1 68415.m04713 expressed protein
Length = 120
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +1
Query: 58 GMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNV 171
G+SQL TKK ++I+NT E +N P + + ++ +
Sbjct: 70 GISQLVTKKWTIIFNT-ENTNNHVSLPAPQEISPRLRL 106
>At1g50370.1 68414.m05646 serine/threonine protein phosphatase,
putative nearly identical to serine/threonine protein
phosphatase [Arabidopsis thaliana] GI:14582206
Length = 303
Score = 29.1 bits (62), Expect = 1.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 238 KSQHPSRILFLRHHHQGNQF*MAHSFYCE 152
K++HP+ I LR +H+ Q + FY E
Sbjct: 97 KARHPANITLLRGNHESRQLTQVYGFYDE 125
>At5g49660.1 68418.m06147 leucine-rich repeat transmembrane protein
kinase, putative contains leucine rich repeat (LRR)
domains, Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 966
Score = 28.3 bits (60), Expect = 3.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 42 EWRIRRNVSIGNKESLTYLQHN 107
EWR R +++G + L YL H+
Sbjct: 758 EWRTRHQIAVGVAQGLAYLHHD 779
>At4g25750.1 68417.m03707 ABC transporter family protein Bactrocera
tryoni membrane transporter (white) gene, PID:g3676298
Length = 577
Score = 28.3 bits (60), Expect = 3.1
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Frame = +1
Query: 193 GDDALEKEFLKGAETLGLIQLKDTETLAVFV---PQYIMQ*P*RRFKLSFSTWRSSIKNI 363
G + + K F A TL + T+TL +F+ P + + ++LS +++ +
Sbjct: 343 GKEGIRKRFGLFAFTLTFLLSSTTQTLPIFIDERPILLRETSSGLYRLSSHILANTLVFL 402
Query: 364 P--SKYC*IYTSNIYFLYVI---WNLLFYIVVLIYV 456
P IY+ ++YFL + W L Y V++I++
Sbjct: 403 PYLLLIAIIYSVSLYFLVGLCFSWQALAYFVLVIWI 438
>At3g19930.1 68416.m02523 sugar transport protein (STP4) identical
to GB:S25009 GI:16524 from [Arabidopsis thaliana]
Length = 514
Score = 27.9 bits (59), Expect = 4.1
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +3
Query: 312 EEVQALVQYMEEFYK-KHS-K*ILLNLYKQYILFVCYLEFVVLYCCINICI*LKSILYQ 482
EE Q L+ EE + KH K I+L Y+ ++ C++ F IN+ +L+Q
Sbjct: 252 EEFQDLIDASEESKQVKHPWKNIMLPRYRPQLIMTCFIPFFQQLTGINVITFYAPVLFQ 310
>At5g55830.1 68418.m06957 lectin protein kinase, putative similar to
receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733; contains protein kinase domain,
Pfam:PF00069; contains legume lectins alpha and beta
domains, Pfam:PF00138 and Pfam:PF00139
Length = 681
Score = 27.5 bits (58), Expect = 5.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 6 LYNGSSITMDSKEWRIRRNVSIGNKESLTYLQH 104
LY S + +W R N++IG +L+YL H
Sbjct: 451 LYQESQTGAVALDWSHRLNIAIGLASALSYLHH 483
>At4g33080.1 68417.m05678 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 519
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 297 NAVTLEEVQALVQYMEEFYKKHSK*ILLNLYKQYIL 404
+++T+E+V A QY+E YK +K I +++IL
Sbjct: 18 SSLTMEKVAAAKQYIENHYKAQNKNIQERKERRWIL 53
>At2g42500.2 68415.m05259 serine/threonine protein phosphatase
PP2A-3 catalytic subunit (PP2A3) identical to SP|Q07100
Serine/threonine protein phosphatase PP2A-3 catalytic
subunit (EC 3.1.3.16) {Arabidopsis thaliana}; contains
Pfam profile PF00149: Ser/Thr protein phosphatase
Length = 266
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 238 KSQHPSRILFLRHHHQGNQF*MAHSFYCE 152
K ++P RI LR +H+ Q + FY E
Sbjct: 61 KMRYPQRITILRGNHESRQITQVYGFYDE 89
>At2g42500.1 68415.m05258 serine/threonine protein phosphatase
PP2A-3 catalytic subunit (PP2A3) identical to SP|Q07100
Serine/threonine protein phosphatase PP2A-3 catalytic
subunit (EC 3.1.3.16) {Arabidopsis thaliana}; contains
Pfam profile PF00149: Ser/Thr protein phosphatase
Length = 313
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 238 KSQHPSRILFLRHHHQGNQF*MAHSFYCE 152
K ++P RI LR +H+ Q + FY E
Sbjct: 108 KMRYPQRITILRGNHESRQITQVYGFYDE 136
>At3g58500.1 68416.m06520 serine/threonine protein phosphatase
PP2A-4 catalytic subunit (PP2A4) identical to SP|P48578
Serine/threonine protein phosphatase PP2A-4 catalytic
subunit (EC 3.1.3.16) (Protein phosphatase 2A isoform 4)
{Arabidopsis thaliana}; contains Pfam profile PF00149:
Ser/Thr protein phosphatase
Length = 313
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 238 KSQHPSRILFLRHHHQGNQF*MAHSFYCE 152
K ++P RI LR +H+ Q + FY E
Sbjct: 108 KVRYPQRITILRGNHESRQITQVYGFYDE 136
>At5g37210.1 68418.m04468 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 625
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 235 SQHPSRILFLRHHHQGNQF 179
S+HP RI F HQGN F
Sbjct: 286 SRHPHRISFTPSFHQGNWF 304
>At2g33170.1 68415.m04064 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor protein kinase
[Pinus sylvestris] gi|12054894|emb|CAC20842; contains
leucine rich repeat (LRR) domains, Pfam:PF00560; contains
protein kinase domain, Pfam:PF00069
Length = 1124
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 6 LYNGSSITMDSKEWRIRRNVSIGNKESLTYLQHN 107
L+ G S +MD W R +++G E L YL H+
Sbjct: 913 LHGGKSHSMD---WPTRFAIALGAAEGLAYLHHD 943
>At1g62640.1 68414.m07067 3-oxoacyl-[acyl-carrier-protein] synthase
III, chloroplast / beta-ketoacyl-ACP synthase III /
3-ketoacyl-acyl carrier protein synthase III (KAS III)
identical to SP|P49243 3-oxoacyl-[acyl-carrier-protein]
synthase III, chloroplast precursor (EC 2.3.1.41)
(Beta-ketoacyl-ACP synthase III) (KAS III) {Arabidopsis
thaliana}
Length = 404
Score = 26.6 bits (56), Expect = 9.5
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 115 SNGFYYAPVAKNVRSKMNVPFRIGCPG 195
++GF+ P N+RS+++VP R+ G
Sbjct: 4 ASGFFTHPSIPNLRSRIHVPVRVSGSG 30
>At1g28640.1 68414.m03527 GDSL-motif lipase, putative strong
similarity to lipase GB:AAA93262 GI:1145627 [Arabidopsis
thaliana]
Length = 390
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 276 GIRASIYNAVTLEEVQALVQYMEEFYKKHSK*ILLNLYKQYILFVC 413
GI ++Y A L+ V + + +E + S + LN++KQ + +C
Sbjct: 111 GINFAVYGATALDRVFLVGKGIESDFTNVSLSVQLNIFKQILPNLC 156
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,518,553
Number of Sequences: 28952
Number of extensions: 207518
Number of successful extensions: 531
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 898188928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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