Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30333
         (823 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    24   1.7  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.9  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   3.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.1  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   6.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   6.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   6.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   6.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   6.8  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 257 SRGTCLPAPVSLKKVLKES 201
           S+G C P  V LK+VL E+
Sbjct: 49  SKGPCPPQGVDLKRVLPEA 67


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -2

Query: 441 QRACGFCPKPNLRFPFQWCSDHGHSCW 361
           Q  C +   PN       C+D   SCW
Sbjct: 15  QLECNWSSGPNATLQSSACTDDLSSCW 41


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +3

Query: 366 NYARGHYTIGKEIVDLVLDRIRKLADQCTG 455
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 793 IESRKQSCPNGRFRFGCKVWAAQCR 719
           + S   SCP+G   + C++    CR
Sbjct: 241 VNSFSCSCPSGTLGYICEINVDDCR 265


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 254 RGTCLPAPVSLKKVLKES 201
           RGTC P    LKK L ++
Sbjct: 53  RGTCSPDGEELKKALPDA 70


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 649 RHSGLCFHGSTMKPSMDNLPAVIF 720
           R S +CF  S+ KP+  +   V F
Sbjct: 149 RSSRMCFFKSSKKPAFSHFLIVFF 172


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 649 RHSGLCFHGSTMKPSMDNLPAVIF 720
           R S +CF  S+ KP+  +   V F
Sbjct: 149 RSSRMCFFKSSKKPAFSHFLIVFF 172


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 649 RHSGLCFHGSTMKPSMDNLPAVIF 720
           R S +CF  S+ KP+  +   V F
Sbjct: 149 RSSRMCFFKSSKKPAFSHFLIVFF 172


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 649 RHSGLCFHGSTMKPSMDNLPAVIF 720
           R S +CF  S+ KP+  +   V F
Sbjct: 149 RSSRMCFFKSSKKPAFSHFLIVFF 172


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,864
Number of Sequences: 336
Number of extensions: 5113
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)