Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30333
(823 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 62 2e-11
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 62 2e-11
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 62 2e-11
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 62 2e-11
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 50 7e-08
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 27 0.086
AY390608-1|AAR27305.1| 242|Anopheles gambiae SP22D protein. 27 0.70
AY390607-1|AAR27304.1| 242|Anopheles gambiae SP22D protein. 27 0.70
AY390606-1|AAR27303.1| 241|Anopheles gambiae SP22D protein. 27 0.70
AY390605-1|AAR27302.1| 241|Anopheles gambiae SP22D protein. 27 0.70
AY390604-1|AAR27301.1| 241|Anopheles gambiae SP22D protein. 27 0.70
AY390603-1|AAR27300.1| 241|Anopheles gambiae SP22D protein. 27 0.70
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 27 0.70
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 27 0.70
EF117201-1|ABL67438.1| 481|Anopheles gambiae serpin 17 protein. 25 3.7
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 25 3.7
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 62.5 bits (145), Expect = 2e-11
Identities = 30/70 (42%), Positives = 42/70 (60%)
Frame = +3
Query: 381 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGLLPY*WSVSSVDYGKKSK 560
HYT G E+VD VLD +RK + C LQGF + HS GGGTGSG+ S +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 561 LEFAIYPAPQ 590
+++ P+P+
Sbjct: 61 NTYSVVPSPK 70
Score = 24.2 bits (50), Expect = 4.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 575 LPRASVSTAVVEPYNSIL 628
+P VS VVEPYN+ L
Sbjct: 66 VPSPKVSDTVVEPYNATL 83
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 62.5 bits (145), Expect = 2e-11
Identities = 30/70 (42%), Positives = 42/70 (60%)
Frame = +3
Query: 381 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGLLPY*WSVSSVDYGKKSK 560
HYT G E+VD VLD +RK + C LQGF + HS GGGTGSG+ S +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 561 LEFAIYPAPQ 590
+++ P+P+
Sbjct: 61 NTYSVVPSPK 70
Score = 24.2 bits (50), Expect = 4.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 575 LPRASVSTAVVEPYNSIL 628
+P VS VVEPYN+ L
Sbjct: 66 VPSPKVSDTVVEPYNATL 83
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 62.5 bits (145), Expect = 2e-11
Identities = 30/70 (42%), Positives = 42/70 (60%)
Frame = +3
Query: 381 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGLLPY*WSVSSVDYGKKSK 560
HYT G E+VD VLD +RK + C LQGF + HS GGGTGSG+ S +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 561 LEFAIYPAPQ 590
+++ P+P+
Sbjct: 61 NTYSVVPSPK 70
Score = 24.2 bits (50), Expect = 4.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 575 LPRASVSTAVVEPYNSIL 628
+P VS VVEPYN+ L
Sbjct: 66 VPSPKVSDTVVEPYNATL 83
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 62.5 bits (145), Expect = 2e-11
Identities = 30/70 (42%), Positives = 42/70 (60%)
Frame = +3
Query: 381 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGLLPY*WSVSSVDYGKKSK 560
HYT G E+VD VLD +RK + C LQGF + HS GGGTGSG+ S +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 561 LEFAIYPAPQ 590
+++ P+P+
Sbjct: 61 NTYSVVPSPK 70
Score = 24.2 bits (50), Expect = 4.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 575 LPRASVSTAVVEPYNSIL 628
+P VS VVEPYN+ L
Sbjct: 66 VPSPKVSDTVVEPYNATL 83
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 50.4 bits (115), Expect = 7e-08
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWE 129
MRECISVHVGQAGVQIGN CW+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
Score = 37.9 bits (84), Expect = 4e-04
Identities = 21/45 (46%), Positives = 23/45 (51%)
Frame = +2
Query: 119 PAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYP 253
P T WS AS+ RCP+TR S ST SS R AST P
Sbjct: 19 PCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQASTCP 63
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 26.6 bits (56), Expect(2) = 0.086
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 170 CPQTRPSGVETILSTLSSARPELASTYPGCLR 265
C RPS ++ ++ S RP+LA+ C R
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAANSATCWR 195
Score = 21.8 bits (44), Expect(2) = 0.086
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 113 VMPAGSFTAWSTASSLMARCPQTRPSGV 196
V+ AG F AW TA +T+P G+
Sbjct: 116 VLLAGDFNAWHTAWG----SERTKPKGI 139
>AY390608-1|AAR27305.1| 242|Anopheles gambiae SP22D protein.
Length = 242
Score = 27.1 bits (57), Expect = 0.70
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 308 CASADLINNSRFKIDEDSRGTCLPAPVSLKKVLKESSPPPMVLS 177
CA L N + + D S+ +CLP P SL V + ++ P L+
Sbjct: 142 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 184
>AY390607-1|AAR27304.1| 242|Anopheles gambiae SP22D protein.
Length = 242
Score = 27.1 bits (57), Expect = 0.70
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 308 CASADLINNSRFKIDEDSRGTCLPAPVSLKKVLKESSPPPMVLS 177
CA L N + + D S+ +CLP P SL V + ++ P L+
Sbjct: 142 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 184
>AY390606-1|AAR27303.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 27.1 bits (57), Expect = 0.70
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 308 CASADLINNSRFKIDEDSRGTCLPAPVSLKKVLKESSPPPMVLS 177
CA L N + + D S+ +CLP P SL V + ++ P L+
Sbjct: 141 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 183
>AY390605-1|AAR27302.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 27.1 bits (57), Expect = 0.70
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 308 CASADLINNSRFKIDEDSRGTCLPAPVSLKKVLKESSPPPMVLS 177
CA L N + + D S+ +CLP P SL V + ++ P L+
Sbjct: 141 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 183
>AY390604-1|AAR27301.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 27.1 bits (57), Expect = 0.70
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 308 CASADLINNSRFKIDEDSRGTCLPAPVSLKKVLKESSPPPMVLS 177
CA L N + + D S+ +CLP P SL V + ++ P L+
Sbjct: 141 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 183
>AY390603-1|AAR27300.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 27.1 bits (57), Expect = 0.70
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 308 CASADLINNSRFKIDEDSRGTCLPAPVSLKKVLKESSPPPMVLS 177
CA L N + + D S+ +CLP P SL V + ++ P L+
Sbjct: 141 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 183
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 27.1 bits (57), Expect = 0.70
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 308 CASADLINNSRFKIDEDSRGTCLPAPVSLKKVLKESSPPPMVLS 177
CA L N + + D S+ +CLP P SL V + ++ P L+
Sbjct: 213 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 255
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 27.1 bits (57), Expect = 0.70
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 308 CASADLINNSRFKIDEDSRGTCLPAPVSLKKVLKESSPPPMVLS 177
CA L N + + D S+ +CLP P SL V + ++ P L+
Sbjct: 212 CAPGTLFNPNTRECDHPSKVSCLPVP-SLNSVNEPANRAPPKLA 254
>EF117201-1|ABL67438.1| 481|Anopheles gambiae serpin 17 protein.
Length = 481
Score = 24.6 bits (51), Expect = 3.7
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -3
Query: 284 NSRFKIDEDSRGTCLPAPVSLKKVLKESSPPPMVLSVGI 168
+ R I D +GT + SL V ++PPP +++ +
Sbjct: 415 SQRTFISVDEQGTTAVSAASLAFVALSAAPPPPIINFAV 453
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 24.6 bits (51), Expect = 3.7
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +1
Query: 424 ESASSLTSVPVCKDS*SSTPS-VEVPALGYFLIDGASLPLTTARSLNWSSPSTPRLSFHC 600
ES + + S + K + + + V +PA+ +DG + L S ++P TPR C
Sbjct: 603 ESGAGIVSTTMTKMADGTQRAYVRLPAMFVSELDGTKIKLGFCVSKVRAAPPTPRERVRC 662
Query: 601 RR 606
R
Sbjct: 663 YR 664
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 958,377
Number of Sequences: 2352
Number of extensions: 21093
Number of successful extensions: 47
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87318630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -