Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30333
         (823 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    26   0.48 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   0.64 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   0.64 
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    23   2.6  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   4.5  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   4.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   4.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   4.5  
AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced prot...    22   7.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.9  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 25.8 bits (54), Expect = 0.48
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 616 QLYPSPPTQPLRHSGLCFHGSTMKPSMDN 702
           QL P+P +  L+ SG+   GST +PS  N
Sbjct: 380 QLCPTPRSTHLKVSGINRVGSTRRPSRRN 408



 Score = 23.4 bits (48), Expect = 2.6
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = -3

Query: 617 CRARRRQWKLRRGVDGELQFRLLAVVNGRDAPSIRK*PRAGTSTEGVEDQES 462
           C  +RR   LRRG DG      LA+ N R      + P+ G S +  +   S
Sbjct: 528 CFCKRRTNTLRRGSDGS----QLAMRNDRSPSYSMQVPQQGASIDDSDPDPS 575


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 25.4 bits (53), Expect = 0.64
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 456 LQGFLIFHSFGGGTGSG 506
           L+G +I HS+GGG G G
Sbjct: 656 LRGSIIDHSYGGGFGFG 672


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 25.4 bits (53), Expect = 0.64
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 456 LQGFLIFHSFGGGTGSG 506
           L+G +I HS+GGG G G
Sbjct: 694 LRGSIIDHSYGGGFGFG 710


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = -3

Query: 617 CRARRRQWKLRRGVDGELQFRLLAVVNGRDAPSIRK*PRAGTSTEGVEDQES 462
           C  +RR   LRRG DG      LA+ N R      + P+ G S +  +   S
Sbjct: 80  CFCKRRTNTLRRGSDGS----QLAMRNDRSPSYSMQVPQQGASIDDSDPDPS 127


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 127 PSRHYRSGLR 98
           P RHYRSGL+
Sbjct: 139 PLRHYRSGLK 148


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 190 RWSCLWASGHQAGCRAPGSKAPSRHYR 110
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 190 RWSCLWASGHQAGCRAPGSKAPSRHYR 110
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 190 RWSCLWASGHQAGCRAPGSKAPSRHYR 110
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 36

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 161 MARCPQTRPSGVETILSTLSSARPE 235
           +A+ P      + T+ ST+SSA+PE
Sbjct: 7   VAQLPHHLSPNMPTMDSTVSSAKPE 31


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 493 PPPKEWKIRNPC 458
           PPP++WK  + C
Sbjct: 416 PPPEDWKPLDKC 427


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 251,000
Number of Sequences: 438
Number of extensions: 5983
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)