Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30333
(823 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 195 3e-50
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 195 3e-50
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 195 3e-50
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 195 3e-50
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 195 3e-50
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 195 3e-50
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 191 6e-49
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 117 8e-27
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 116 3e-26
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 116 3e-26
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 115 4e-26
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 114 8e-26
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 113 1e-25
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 113 1e-25
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 112 3e-25
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 108 5e-24
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 77 1e-14
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 77 1e-14
At4g22753.1 68417.m03284 sterol desaturase family protein simila... 30 2.1
At1g18960.1 68414.m02359 myb family transcription factor contain... 30 2.1
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 2.8
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 3.7
At5g11620.1 68418.m01359 SWIM zinc finger family protein / mitog... 28 6.5
At2g31690.1 68415.m03868 lipase class 3 family protein similar t... 28 6.5
At5g59380.1 68418.m07441 methyl-CpG-binding domain-containing pr... 28 8.6
At5g12930.1 68418.m01483 expressed protein 28 8.6
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 195 bits (476), Expect = 3e-50
Identities = 98/147 (66%), Positives = 108/147 (73%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRK 124
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGLLPY*WSVSSVDYGKKSKLEFAIYPAPQXXXXXXXX 614
LAD CTGLQGFL+F++ GGGTGSGL SVDYGKKSKL F IYP+PQ
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEP 184
Query: 615 XXXXXXXXXXXEALWTVLSWVDNEAIY 695
E V +DNEAIY
Sbjct: 185 YNSVLSTHSLLEHT-DVAVLLDNEAIY 210
Score = 124 bits (300), Expect = 5e-29
Identities = 50/64 (78%), Positives = 58/64 (90%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 244 HVPR 255
HVPR
Sbjct: 61 HVPR 64
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 195 bits (476), Expect = 3e-50
Identities = 98/147 (66%), Positives = 108/147 (73%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRK 124
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGLLPY*WSVSSVDYGKKSKLEFAIYPAPQXXXXXXXX 614
LAD CTGLQGFL+F++ GGGTGSGL SVDYGKKSKL F IYP+PQ
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEP 184
Query: 615 XXXXXXXXXXXEALWTVLSWVDNEAIY 695
E V +DNEAIY
Sbjct: 185 YNSVLSTHSLLEHT-DVAVLLDNEAIY 210
Score = 124 bits (300), Expect = 5e-29
Identities = 50/64 (78%), Positives = 58/64 (90%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 244 HVPR 255
HVPR
Sbjct: 61 HVPR 64
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 195 bits (476), Expect = 3e-50
Identities = 99/147 (67%), Positives = 108/147 (73%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGLLPY*WSVSSVDYGKKSKLEFAIYPAPQXXXXXXXX 614
LAD CTGLQGFL+F++ GGGTGSGL SVDYGKKSKL F +YP+PQ
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEP 184
Query: 615 XXXXXXXXXXXEALWTVLSWVDNEAIY 695
E V +DNEAIY
Sbjct: 185 YNSVLSTHSLLEHT-DVSILLDNEAIY 210
Score = 142 bits (343), Expect = 3e-34
Identities = 57/64 (89%), Positives = 63/64 (98%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 244 HVPR 255
HVPR
Sbjct: 61 HVPR 64
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 195 bits (476), Expect = 3e-50
Identities = 99/147 (67%), Positives = 108/147 (73%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGLLPY*WSVSSVDYGKKSKLEFAIYPAPQXXXXXXXX 614
LAD CTGLQGFL+F++ GGGTGSGL SVDYGKKSKL F +YP+PQ
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEP 184
Query: 615 XXXXXXXXXXXEALWTVLSWVDNEAIY 695
E V +DNEAIY
Sbjct: 185 YNSVLSTHSLLEHT-DVSILLDNEAIY 210
Score = 142 bits (343), Expect = 3e-34
Identities = 57/64 (89%), Positives = 63/64 (98%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 244 HVPR 255
HVPR
Sbjct: 61 HVPR 64
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 195 bits (476), Expect = 3e-50
Identities = 99/147 (67%), Positives = 108/147 (73%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGLLPY*WSVSSVDYGKKSKLEFAIYPAPQXXXXXXXX 614
LAD CTGLQGFL+F++ GGGTGSGL SVDYGKKSKL F +YP+PQ
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEP 184
Query: 615 XXXXXXXXXXXEALWTVLSWVDNEAIY 695
E V +DNEAIY
Sbjct: 185 YNSVLSTHSLLEHT-DVSILLDNEAIY 210
Score = 143 bits (346), Expect = 1e-34
Identities = 57/64 (89%), Positives = 64/64 (100%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 244 HVPR 255
HVPR
Sbjct: 61 HVPR 64
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 195 bits (476), Expect = 3e-50
Identities = 99/147 (67%), Positives = 108/147 (73%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGLLPY*WSVSSVDYGKKSKLEFAIYPAPQXXXXXXXX 614
LAD CTGLQGFL+F++ GGGTGSGL SVDYGKKSKL F +YP+PQ
Sbjct: 125 LADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEP 184
Query: 615 XXXXXXXXXXXEALWTVLSWVDNEAIY 695
E V +DNEAIY
Sbjct: 185 YNSVLSTHSLLEHT-DVSILLDNEAIY 210
Score = 143 bits (346), Expect = 1e-34
Identities = 57/64 (89%), Positives = 64/64 (100%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 244 HVPR 255
HVPR
Sbjct: 61 HVPR 64
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 191 bits (465), Expect = 6e-49
Identities = 97/163 (59%), Positives = 112/163 (68%)
Frame = +3
Query: 207 FQHFLQRDRSWQARTPAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 386
F F S Q AVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 387 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGLLPY*WSVSSVDYGKKSKLE 566
T+G+EIVD L+R+RKLAD CTGLQGFL+F++ GGGTGSGL SVD+GKKSKL
Sbjct: 109 TVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLG 168
Query: 567 FAIYPAPQXXXXXXXXXXXXXXXXXXXEALWTVLSWVDNEAIY 695
F IYP+PQ E V+ +DNEAIY
Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLSTHSLLEHT-DVVVLLDNEAIY 210
Score = 119 bits (287), Expect = 2e-27
Identities = 47/64 (73%), Positives = 57/64 (89%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 244 HVPR 255
HVPR
Sbjct: 61 HVPR 64
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 117 bits (282), Expect = 8e-27
Identities = 52/112 (46%), Positives = 74/112 (66%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
A+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRK 122
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGLLPY*WSVSSVDYGKKSKLEFAIYPAPQ 590
A+ C LQGF + HS GGGTGSG+ S +Y + L F+++P+P+
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 174
Score = 53.6 bits (123), Expect = 2e-07
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 234
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEAS 55
Query: 235 AGKHVPR 255
G++VPR
Sbjct: 56 CGRYVPR 62
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 116 bits (278), Expect = 3e-26
Identities = 52/112 (46%), Positives = 74/112 (66%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGLLPY*WSVSSVDYGKKSKLEFAIYPAPQ 590
A+ C LQGF + HS GGGTGSG+ S +Y + L F+++P+P+
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 174
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGR 58
Query: 244 HVPR 255
VPR
Sbjct: 59 FVPR 62
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 116 bits (278), Expect = 3e-26
Identities = 51/112 (45%), Positives = 74/112 (66%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 64 AVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRK 123
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGLLPY*WSVSSVDYGKKSKLEFAIYPAPQ 590
A+ C LQGF + HS GGGTGSG+ S +Y + L F+++P+P+
Sbjct: 124 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 175
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/64 (39%), Positives = 37/64 (57%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGR 59
Query: 244 HVPR 255
+VPR
Sbjct: 60 YVPR 63
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 115 bits (276), Expect = 4e-26
Identities = 51/112 (45%), Positives = 74/112 (66%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGLLPY*WSVSSVDYGKKSKLEFAIYPAPQ 590
A+ C LQGF + HS GGGTGSG+ S +Y + + F+++P+P+
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPK 174
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/64 (37%), Positives = 36/64 (56%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 244 HVPR 255
+VPR
Sbjct: 59 YVPR 62
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 114 bits (274), Expect = 8e-26
Identities = 50/112 (44%), Positives = 74/112 (66%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 64 AVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRK 123
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGLLPY*WSVSSVDYGKKSKLEFAIYPAPQ 590
A+ C LQGF + HS GGGTGSG+ S +Y + L F+++P+P+
Sbjct: 124 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 175
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/64 (39%), Positives = 36/64 (56%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 244 HVPR 255
+VPR
Sbjct: 60 YVPR 63
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 113 bits (272), Expect = 1e-25
Identities = 51/112 (45%), Positives = 73/112 (65%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGLLPY*WSVSSVDYGKKSKLEFAIYPAPQ 590
A+ C LQGF + HS GGGTGSG+ S +Y + L F+++P+P+
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 174
Score = 54.4 bits (125), Expect = 9e-08
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 244 HVPR 255
VPR
Sbjct: 59 FVPR 62
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 113 bits (272), Expect = 1e-25
Identities = 51/112 (45%), Positives = 73/112 (65%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGLLPY*WSVSSVDYGKKSKLEFAIYPAPQ 590
A+ C LQGF + HS GGGTGSG+ S +Y + L F+++P+P+
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 174
Score = 54.4 bits (125), Expect = 9e-08
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 244 HVPR 255
VPR
Sbjct: 59 FVPR 62
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 112 bits (269), Expect = 3e-25
Identities = 49/112 (43%), Positives = 74/112 (66%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGLLPY*WSVSSVDYGKKSKLEFAIYPAPQ 590
A+ C LQGF + HS GGGTGSG+ S +Y + + F+++P+P+
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPK 174
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/64 (42%), Positives = 35/64 (54%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 244 HVPR 255
+VPR
Sbjct: 59 YVPR 62
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 108 bits (259), Expect = 5e-24
Identities = 48/112 (42%), Positives = 73/112 (65%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 434
AV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 435 LADQCTGLQGFLIFHSFGGGTGSGLLPY*WSVSSVDYGKKSKLEFAIYPAPQ 590
A+ LQGF + HS GGGTGSG+ S +Y + + F+++P+P+
Sbjct: 123 EAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPK 174
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/64 (40%), Positives = 35/64 (54%)
Frame = +1
Query: 64 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 243
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGK 58
Query: 244 HVPR 255
+VPR
Sbjct: 59 YVPR 62
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 77.4 bits (182), Expect = 1e-14
Identities = 38/111 (34%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLDRI 428
A+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D I
Sbjct: 64 ALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIMDMI 122
Query: 429 RKLADQCTGLQGFLIFHSFGGGTGSGLLPY*WSVSSVDYGKKSKLEFAIYP 581
+ AD L+GF++ HS GGTGSG+ Y + Y KK ++++P
Sbjct: 123 DREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFP 173
Score = 52.0 bits (119), Expect = 5e-07
Identities = 27/63 (42%), Positives = 35/63 (55%)
Frame = +1
Query: 67 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 246
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 247 VPR 255
+PR
Sbjct: 61 IPR 63
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 77.0 bits (181), Expect = 1e-14
Identities = 38/111 (34%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Frame = +3
Query: 255 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLDRI 428
A+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D I
Sbjct: 64 ALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIMDMI 122
Query: 429 RKLADQCTGLQGFLIFHSFGGGTGSGLLPY*WSVSSVDYGKKSKLEFAIYP 581
+ AD L+GF++ HS GGTGSG+ Y + Y KK ++++P
Sbjct: 123 DREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFP 173
Score = 52.0 bits (119), Expect = 5e-07
Identities = 27/63 (42%), Positives = 35/63 (55%)
Frame = +1
Query: 67 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 246
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 247 VPR 255
+PR
Sbjct: 61 IPR 63
>At4g22753.1 68417.m03284 sterol desaturase family protein similar
to sterol 4-alpha-methyl-oxidase GI:16973471 from
[Arabidopsis thaliana]; contains Pfam profile PF01598:
Sterol desaturase
Length = 291
Score = 29.9 bits (64), Expect = 2.1
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -2
Query: 723 VEDYRRQIVHRWLHCR 676
+EDY +HRW+HC+
Sbjct: 134 IEDYTNYWIHRWMHCK 149
>At1g18960.1 68414.m02359 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain;
contains similarity to transcription factor GI:9759592
from [Arabidopsis thaliana]
Length = 307
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 552 SCRSQRKRRSINKEVTQSRYLHRRSGRSGILADRYTGQRACG 427
SC S+ K N+E T +++ + ++G A + G R CG
Sbjct: 4 SCSSKSKNPWTNEEDTTQKFVFASASKNGCAAPKKIGLRRCG 45
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 500 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYD 402
+G TEGVED S LV D ++ QI D
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRD 641
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -3
Query: 233 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 108
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At5g11620.1 68418.m01359 SWIM zinc finger family protein /
mitogen-activated protein kinase kinase kinase
(MAPKKK)-related contains weak similarity to
Swiss-Prot:P53349 mitogen-activated protein kinase
kinase kinase 1 (MAPK/ERK kinase kinase 1, MEK kinase 1,
MEKK 1) [Mus musculus]; contains Pfam profile PF04434:
SWIM zinc finger
Length = 273
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1
Query: 562 WSSPSTPRL--SFHCRRRALQLYPSPPTQPLRHSGLCFHGSTMKPSMDNLPA 711
+S+P+ P SF ++R LQL+P+ +QP + S M+ +D PA
Sbjct: 112 FSAPTRPDCLASFRLQQRFLQLFPATTSQPGYTTNSSSSTSKMENEVDEEPA 163
>At2g31690.1 68415.m03868 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 484
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 287 NNSRFKIDEDSRGTCLPAPVSLKKVLKESSPPPM 186
N R K S + L APV L + SSPPP+
Sbjct: 38 NPKRLKTANSSSSSSLLAPVILNSPVASSSPPPI 71
>At5g59380.1 68418.m07441 methyl-CpG-binding domain-containing
protein similar to testis specific methyl-CpG binding
protein MBD2 [Homo sapiens] GI:3800801; contains Pfam
profile PF01429: Methyl-CpG binding domain
Length = 225
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 505 PEPVPPPKEWKIRNPCRPVHWS 440
P P PPP ++ +NP V WS
Sbjct: 161 PPPPPPPLDFDFKNPPDKVSWS 182
>At5g12930.1 68418.m01483 expressed protein
Length = 439
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +1
Query: 532 LPLTTARSLNWSSPSTPRLSFHCRRRALQLYPSPPTQPLRHSGL 663
+P + + SP T RLS H RR L SPP + GL
Sbjct: 15 IPHASVHLAPFFSPYTRRLSTHFTRRCQPLQSSPPLAYISLQGL 58
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,055,324
Number of Sequences: 28952
Number of extensions: 471675
Number of successful extensions: 1537
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1519
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1882599200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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