Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30332
         (756 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   1.5  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   4.6  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    22   4.6  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   6.1  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   6.1  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   6.1  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.0  

>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -2

Query: 230 PFSPNVALCFDHISSANQQP 171
           P  PN   C DH+   N  P
Sbjct: 695 PVPPNFPTCGDHVPEINSNP 714


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
          protein.
          Length = 287

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +2

Query: 5  HLWYVSCIRSDRLGPQRTPW 64
          H WY    +  ++GP++  W
Sbjct: 26 HSWYAGYHQGAQMGPEQQMW 45


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
          protein.
          Length = 249

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +2

Query: 5  HLWYVSCIRSDRLGPQRTPW 64
          H WY    +  ++GP++  W
Sbjct: 26 HSWYAGYHQGAQMGPEQQMW 45


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 260 YTNSVLSAKCPFSPNVALCFDH 195
           Y N+VL  +    PNV + F+H
Sbjct: 112 YLNNVLLTELEKYPNVKIYFNH 133


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 260 YTNSVLSAKCPFSPNVALCFDH 195
           Y N+VL  +    PNV + F+H
Sbjct: 112 YLNNVLLTELEKYPNVKIYFNH 133


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 260 YTNSVLSAKCPFSPNVALCFDH 195
           Y N+VL  +    PNV + F+H
Sbjct: 112 YLNNVLLTELEKYPNVKIYFNH 133


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 484 SQICFCKSGRTEHVYLPK 537
           S+  FC  G  +H+ LPK
Sbjct: 572 SEFNFCGCGWPQHMLLPK 589


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 337 LKPTTKVKTVLGIHSLQF 284
           LK  TKV T+LG+ S  F
Sbjct: 15  LKCITKVLTILGLLSCSF 32


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 337 LKPTTKVKTVLGIHSLQF 284
           LK  TKV T+LG+ S  F
Sbjct: 11  LKCITKVLTILGLLSCSF 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,007
Number of Sequences: 336
Number of extensions: 3252
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)