Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30331
         (709 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    36   4e-04
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.3  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.6  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   7.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 35.5 bits (78), Expect = 4e-04
 Identities = 15/57 (26%), Positives = 33/57 (57%)
 Frame = -3

Query: 296 FVLCSKHLVYSSVMLIMNEIS*MSVILM*YLTYLVYLICMYVFHYM*S*YCSSIIFY 126
           F++ + HL++  V++I+  I       + +  +L+ L+C+Y F+YM   +C + I +
Sbjct: 219 FIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIF 275



 Score = 31.1 bits (67), Expect = 0.009
 Identities = 15/61 (24%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
 Frame = -3

Query: 296 FVLCSKHLVYSSVMLIMNEIS*MSVILM*YLT-YLVYLICMYVFHYM*S*YCSSIIFYCF 120
           F++ + HL++    +  N +  + ++ + Y T +L++L C+Y F+     +   ++FYC 
Sbjct: 173 FIIFTMHLLFCCAFIFFN-MHLLFLLCLDYFTLHLLFLPCIYYFYSAFIIFTIHLLFYCV 231

Query: 119 L 117
           L
Sbjct: 232 L 232



 Score = 25.0 bits (52), Expect = 0.60
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -3

Query: 209 YLTYLVYLICMYVFHYM*S*YCSSIIFYCFLKQC 108
           +  +L++L+C+Y F      YC+ II  C    C
Sbjct: 275 FTMHLLFLLCIYYF------YCALIILLCIYYFC 302



 Score = 24.6 bits (51), Expect = 0.80
 Identities = 18/69 (26%), Positives = 34/69 (49%)
 Frame = -3

Query: 314 YSVI*IFVLCSKHLVYSSVMLIMNEIS*MSVILM*YLTYLVYLICMYVFHYM*S*YCSSI 135
           ++V  +F+LC  + V     L+       + I+  +  +L++L+C+Y F      +C+ I
Sbjct: 123 FTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFII--FTVHLLFLLCIYHF------FCAFI 174

Query: 134 IFYCFLKQC 108
           IF   L  C
Sbjct: 175 IFTMHLLFC 183


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 77   KNEI*IYLKFVQKIPINFLKFI 12
            KNEI +Y+ ++Q  PI F+  I
Sbjct: 1268 KNEIGVYITYLQLEPIGFVFLI 1289


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 77   KNEI*IYLKFVQKIPINFLKFI 12
            KNEI +Y+ ++Q  PI F+  I
Sbjct: 1268 KNEIGVYITYLQLEPIGFVFLI 1289


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 231  DECDFNVIFDIPSLSNMYVCVPLYVV 154
            D+CD    +   S S+ YVCV  ++V
Sbjct: 1205 DKCDSGQYYPHESCSSFYVCVNGHLV 1230


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 40  FWTNFRYIYISFFCIVCYLVIVE 108
           FW+ F  + + + C  CY  + E
Sbjct: 274 FWSAFFIVNVLYICNQCYNTVEE 296


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -3

Query: 290  LCSKHLVYSSVMLIMNEIS*MSVILM*YLTYLVYLICMYV 171
            LCS H   S ++   NEI  + ++L   L +L+    M++
Sbjct: 1304 LCSLHHHLSKLIKSFNEIYGVPLLLFFGLNFLIITQAMFL 1343


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = -3

Query: 290 LCSKHLVYSSVMLIMNEIS*MSVILM*YLTYLVYLICMYV 171
           +C+ H   S ++   NEI  + ++LM  +++L+    ++V
Sbjct: 222 ICTLHHHLSKLVTRFNEIFGLGLLLMFAVSFLIITQVIFV 261


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +1

Query: 31  IGIFWTNFRYIYISFFCIVCYLVIVEHCF 117
           +G+F+  F  +Y+S+  I  ++  +  CF
Sbjct: 166 LGVFFKRFLPVYVSYLLI--FVQQIPFCF 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,006
Number of Sequences: 336
Number of extensions: 3044
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)