Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30328
         (731 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54LS6 Cluster: Putative uncharacterized protein; n=1; ...    34   4.1  
UniRef50_O97322 Cluster: Putative uncharacterized protein MAL3P7...    34   4.1  
UniRef50_Q9XMS7 Cluster: Haem lyase; n=2; Alveolata|Rep: Haem ly...    33   7.2  
UniRef50_A5K1H5 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  

>UniRef50_Q54LS6 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 386

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 19/63 (30%), Positives = 33/63 (52%)
 Frame = +3

Query: 195 NLSVL*VFKDTLIFVFCIGIIYRVIIVLFFIIEPFNEKLLGSSFQFALKIYNKFSKLDSV 374
           NLS+L VF +   F + + I +      FF   P    LLG +  ++  I++KFS + + 
Sbjct: 234 NLSILFVFTNFFFFYYFLYIYF----FFFFFFYPIQLTLLGGADIYSFSIFSKFSNVIAF 289

Query: 375 AVT 383
           ++T
Sbjct: 290 SIT 292


>UniRef50_O97322 Cluster: Putative uncharacterized protein MAL3P7.32;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein MAL3P7.32 - Plasmodium falciparum
            (isolate 3D7)
          Length = 1334

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
 Frame = +3

Query: 216  FKDTLIFV-FCIGIIYRVIIVLFFIIEPFNEKLLGSSFQFALKIYNKFSKLDSVAVTLLY 392
            FK T IF+ F I ++   ++V F  I+P     + S +   L  YNK S   ++ V +L 
Sbjct: 1221 FKYTAIFIGFIISLLRYDLLVYFSFIKPEILFSIFSKYFLFLSSYNKNSLFITINV-ILI 1279

Query: 393  VTAFTFYVNLNK 428
            +  F+ Y+  NK
Sbjct: 1280 IAYFSLYIRYNK 1291


>UniRef50_Q9XMS7 Cluster: Haem lyase; n=2; Alveolata|Rep: Haem lyase
           - Tetrahymena pyriformis
          Length = 512

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
 Frame = +3

Query: 156 MYHIILP**SIIQNLSVL*VFKDTLIFVFCIGIIYRVIIVLFFIIEPFNE----KLLGSS 323
           +Y+IIL    I  N+++L    +++I VF + +IY  ++++ + ++ +       LL + 
Sbjct: 299 IYYIILINIIIGSNINILSNLNNSIINVFKLYLIYMFLMLITWNLKHWKSNFWFSLLNNE 358

Query: 324 FQFALKIYNKFSKLDSVAVTLLYVTAFTFYVNLNK 428
           F     +Y  +  +     T L +  F  Y+ LNK
Sbjct: 359 FTIISNVYKIYWSIRIYKTTHLIILMFISYIFLNK 393


>UniRef50_A5K1H5 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 975

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 18/72 (25%), Positives = 38/72 (52%)
 Frame = +3

Query: 213  VFKDTLIFVFCIGIIYRVIIVLFFIIEPFNEKLLGSSFQFALKIYNKFSKLDSVAVTLLY 392
            +F   +  +F   + + + I LF I   FNEK++  +       +NKF  +++V V +  
Sbjct: 870  IFIQWIYTIFLTCLPFHIFIRLFDIYL-FNEKIIYETILCIFTYFNKFHHVENVDVVVKN 928

Query: 393  VTAFTFYVNLNK 428
            ++AF+F  ++ +
Sbjct: 929  LSAFSFNTHIQE 940


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,591,917
Number of Sequences: 1657284
Number of extensions: 11280870
Number of successful extensions: 21704
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21685
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)