Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30328
(731 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 26 0.32
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 26 0.42
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 26 0.42
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 25 0.73
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 24 1.7
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 24 1.7
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 24 1.7
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 24 1.7
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 2.2
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 3.9
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 3.9
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 3.9
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 3.9
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 3.9
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 3.9
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 3.9
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 3.9
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 3.9
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 5.2
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 5.2
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 5.2
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 5.2
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 6.8
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 6.8
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 6.8
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 6.8
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 6.8
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 6.8
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 6.8
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 26.2 bits (55), Expect = 0.32
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 290 NYKK*NNYDSINYSNTEYEN 231
NY NNY++ NY+N Y N
Sbjct: 95 NYNN-NNYNNYNYNNNNYNN 113
Score = 23.8 bits (49), Expect = 1.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 275 NNYDSINYSNTEYEN 231
NNY++ NY+N Y N
Sbjct: 94 NNYNNNNYNNYNYNN 108
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 25.8 bits (54), Expect = 0.42
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 219 KDTLIFVFCIGIIYRVIIVLFFIIEPFNEKLLGS 320
+DT +FV CI I+ +I L FII F +LL S
Sbjct: 215 EDTKVFVTCI-FIWAYVIPLIFII-LFYSRLLSS 246
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 25.8 bits (54), Expect = 0.42
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 219 KDTLIFVFCIGIIYRVIIVLFFIIEPFNEKLLGS 320
+DT +FV CI I+ +I L FII F +LL S
Sbjct: 215 EDTKVFVTCI-FIWAYVIPLIFII-LFYSRLLSS 246
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 25.0 bits (52), Expect = 0.73
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 299 KWLNYKK*NNYDSINYSN 246
K+ NY NNY++ NY+N
Sbjct: 323 KYSNYNNYNNYNNNNYNN 340
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 287 YKK*NNYDSINYSNTEYEN 231
Y NNY+ NY+N Y N
Sbjct: 324 YSNYNNYN--NYNNNNYNN 340
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 287 YKK*NNYDSINYSNTEYE 234
Y NNY++ NY+N Y+
Sbjct: 91 YSNYNNYNNNNYNNNNYK 108
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 290 NYKK*NNYDSINYSNTEYEN 231
NY NNY++ NY +Y N
Sbjct: 96 NYNN-NNYNNNNYKKLQYYN 114
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 287 YKK*NNYDSINYSNTEYE 234
Y NNY++ NY+N Y+
Sbjct: 91 YSNYNNYNNNNYNNNNYK 108
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 290 NYKK*NNYDSINYSNTEYEN 231
NY NNY++ NY +Y N
Sbjct: 96 NYNN-NNYNNNNYKKLQYYN 114
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 287 YKK*NNYDSINYSNTEYE 234
Y NNY++ NY+N Y+
Sbjct: 91 YSNYNNYNNNNYNNNNYK 108
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 290 NYKK*NNYDSINYSNTEYEN 231
NY NNY++ NY +Y N
Sbjct: 96 NYNN-NNYNNNNYKKLQYYN 114
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 287 YKK*NNYDSINYSNTEYE 234
Y NNY++ NY+N Y+
Sbjct: 91 YSNYNNYNNNNYNNNNYK 108
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 290 NYKK*NNYDSINYSNTEYEN 231
NY NNY++ NY +Y N
Sbjct: 96 NYNN-NNYNNNNYKKLQYYN 114
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.4 bits (48), Expect = 2.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 290 NYKK*NNYDSINYSNTEYEN 231
NYK NY++ NY+N Y N
Sbjct: 328 NYKY--NYNNNNYNNNNYNN 345
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -1
Query: 299 KWLNYKK*NNYDSINYSNTEYEN*SVFKHLQNRQVLN 189
K+ NY NN + NY+N N +K L ++N
Sbjct: 90 KYSNYNNYNNNYNNNYNNNYNNN---YKKLYKNYIIN 123
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -1
Query: 299 KWLNYKK*NNYDSINYSNTEYEN*SVFKHLQNRQVLN 189
K+ NY NN + NY+N N +K L ++N
Sbjct: 90 KYSNYNNYNNNYNNNYNNNYNNN---YKKLYKNYIIN 123
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 299 KWLNYKK*NNYDSINYSNTEYEN 231
K+ NY NN + NY +Y N
Sbjct: 90 KYSNYNNYNNNYNTNYKKLQYYN 112
Score = 22.2 bits (45), Expect = 5.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1
Query: 275 NNYDSINYSNTEYEN*SVFKHLQNRQVLN 189
NNY NY+N + +K LQ ++N
Sbjct: 87 NNYKYSNYNNYNNNYNTNYKKLQYYNIIN 115
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 299 KWLNYKK*NNYDSINYSNTEYEN 231
K+ NY NN + NY +Y N
Sbjct: 90 KYSNYNNYNNNYNTNYKKLQYYN 112
Score = 22.2 bits (45), Expect = 5.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1
Query: 275 NNYDSINYSNTEYEN*SVFKHLQNRQVLN 189
NNY NY+N + +K LQ ++N
Sbjct: 87 NNYKYSNYNNYNNNYNTNYKKLQYYNIIN 115
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 299 KWLNYKK*NNYDSINYSNTEYEN 231
K+ NY NN + NY +Y N
Sbjct: 90 KYSNYNNYNNNYNTNYKKLQYYN 112
Score = 22.2 bits (45), Expect = 5.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1
Query: 275 NNYDSINYSNTEYEN*SVFKHLQNRQVLN 189
NNY NY+N + +K LQ ++N
Sbjct: 87 NNYKYSNYNNYNNNYNTNYKKLQYYNIIN 115
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 299 KWLNYKK*NNYDSINYSNTEYEN 231
K+ NY NN + NY +Y N
Sbjct: 90 KYSNYNNYNNNYNTNYKKLQYYN 112
Score = 22.2 bits (45), Expect = 5.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1
Query: 275 NNYDSINYSNTEYEN*SVFKHLQNRQVLN 189
NNY NY+N + +K LQ ++N
Sbjct: 87 NNYKYSNYNNYNNNYNTNYKKLQYYNIIN 115
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 299 KWLNYKK*NNYDSINYSNTEYEN 231
K+ NY NN + NY +Y N
Sbjct: 90 KYSNYNNYNNNYNTNYKKLQYYN 112
Score = 22.2 bits (45), Expect = 5.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1
Query: 275 NNYDSINYSNTEYEN*SVFKHLQNRQVLN 189
NNY NY+N + +K LQ ++N
Sbjct: 87 NNYKYSNYNNYNNNYNTNYKKLQYYNIIN 115
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 299 KWLNYKK*NNYDSINYSNTEYEN 231
K+ NY NN + NY +Y N
Sbjct: 90 KYSNYNNYNNNYNTNYKKLQYYN 112
Score = 22.2 bits (45), Expect = 5.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1
Query: 275 NNYDSINYSNTEYEN*SVFKHLQNRQVLN 189
NNY NY+N + +K LQ ++N
Sbjct: 87 NNYKYSNYNNYNNNYNTNYKKLQYYNIIN 115
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 299 KWLNYKK*NNYDSINYSNTEYEN 231
K+ NY NN + NY +Y N
Sbjct: 90 KYSNYNNYNNNYNTNYKKLQYYN 112
Score = 22.2 bits (45), Expect = 5.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1
Query: 275 NNYDSINYSNTEYEN*SVFKHLQNRQVLN 189
NNY NY+N + +K LQ ++N
Sbjct: 87 NNYKYSNYNNYNNNYNTNYKKLQYYNIIN 115
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.2 bits (45), Expect = 5.2
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 316 PSNFSLNGSIIKNKTI 269
PS SLN +IKN+TI
Sbjct: 229 PSLTSLNAYLIKNQTI 244
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.2 bits (45), Expect = 5.2
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 316 PSNFSLNGSIIKNKTI 269
PS SLN +IKN+TI
Sbjct: 229 PSLTSLNAYLIKNQTI 244
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.2 bits (45), Expect = 5.2
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 316 PSNFSLNGSIIKNKTI 269
PS SLN +IKN+TI
Sbjct: 280 PSLTSLNAYLIKNQTI 295
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.2 bits (45), Expect = 5.2
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 316 PSNFSLNGSIIKNKTI 269
PS SLN +IKN+TI
Sbjct: 229 PSLTSLNAYLIKNQTI 244
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 275 NNYDSINYSNTEYE 234
NNY+ NY+N Y+
Sbjct: 87 NNYNYSNYNNNNYK 100
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 275 NNYDSINYSNTEYE 234
NNY+ NY+N Y+
Sbjct: 87 NNYNYSNYNNNNYK 100
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 275 NNYDSINYSNTEYE 234
NNY+ NY+N Y+
Sbjct: 87 NNYNYSNYNNNNYK 100
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 275 NNYDSINYSNTEYE 234
NNY+ NY+N Y+
Sbjct: 87 NNYNYSNYNNNNYK 100
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 275 NNYDSINYSNTEYE 234
NNY+ NY+N Y+
Sbjct: 87 NNYNYSNYNNNNYK 100
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 275 NNYDSINYSNTEYE 234
NNY+ NY+N Y+
Sbjct: 87 NNYNYSNYNNNNYK 100
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 6.8
Identities = 10/24 (41%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = -1
Query: 299 KWLNYKK*NN-YDSINYSNTEYEN 231
K+ NY NN Y++ N N Y N
Sbjct: 323 KYSNYNNYNNNYNNYNNYNNNYNN 346
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,552
Number of Sequences: 438
Number of extensions: 4723
Number of successful extensions: 44
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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